BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2785.p (311 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776010.1| glycerophosphoryl diester phosphodiesterase ... 477 e-132 ref|YP_003375069.1| glycerophosphoryl diester phosphodiesterase ... 226 5e-57 ref|ZP_02242084.1| hypothetical protein Xoryp_05275 [Xanthomonas... 200 3e-49 ref|YP_449949.1| hypothetical protein XOO_0920 [Xanthomonas oryz... 159 5e-37 ref|YP_199657.1| glycerophosphodiester phosphodiesterase [Xantho... 159 6e-37 >ref|YP_003776010.1| glycerophosphoryl diester phosphodiesterase [Herbaspirillum seropedicae SmR1] gb|ADJ64102.1| glycerophosphoryl diester phosphodiesterase protein [Herbaspirillum seropedicae SmR1] Length = 315 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 260/317 (82%), Positives = 281/317 (88%), Gaps = 8/317 (2%) Query: 1 MHSLGRF------LLTCTFCLLMDQALAQAAPLAWRQSALTTATGPVLVSSHRSCWTETS 54 M SLGRF L TC FCLLMD A A + L WRQSALTT TGPVLVSSHRSCWTETS Sbjct: 1 MPSLGRFFAILSLLATCNFCLLMDPAHADS--LTWRQSALTTPTGPVLVSSHRSCWTETS 58 Query: 55 ENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDKTVDRTTNGHGAVADLTLAEIQALQ 114 ENSLDGIRRCIAEGIDIGEIDVRTT+DGALVLMHD+TVDRTTNG GAV +LTLA+IQ L+ Sbjct: 59 ENSLDGIRRCIAEGIDIGEIDVRTTQDGALVLMHDQTVDRTTNGRGAVTELTLAQIQDLR 118 Query: 115 LYARGGGKGASLTARRVPTLQEALAAARGRILLNLDVKAADIGPMVAAILETDTARDVLL 174 LY RGG +GA+LT+RRVPTLQ+ALA ARGRI+LNLDVK ADIG MVAAILETDTARDVLL Sbjct: 119 LYTRGGRQGATLTSRRVPTLQQALAVARGRIVLNLDVKDADIGAMVAAILETDTARDVLL 178 Query: 175 NINAGVDAQQVAWARSLGIAVQTLYFDEKTGASARSGQLQTMARQEPTVLQIIFRDPAVV 234 NIN GVD QQVAWARSLGIAVQTLYFDEKTGAS+RS QLQ MARQEPTVLQ+IFRDP+VV Sbjct: 179 NINPGVDPQQVAWARSLGIAVQTLYFDEKTGASSRSAQLQVMARQEPTVLQLIFRDPSVV 238 Query: 235 GEAVQAIGRRPVRLLVNTMAIDIDSGRPMDLAGPYLDTVAVVHPEQVWGKLIASGVSIIQ 294 A +A+ RPVR+LVNTMA+DIDSGRPMDLAGPYLDTVAV PEQVWG+LIA GVSIIQ Sbjct: 239 DAAGRALAGRPVRMLVNTMALDIDSGRPMDLAGPYLDTVAVDDPEQVWGQLIAQGVSIIQ 298 Query: 295 TDEPQRLLAWLKRKKLR 311 TDEPQRLLAWL+R+KLR Sbjct: 299 TDEPQRLLAWLRRRKLR 315 >ref|YP_003375069.1| glycerophosphoryl diester phosphodiesterase [Xanthomonas albilineans GPE PC73] emb|CBA15081.1| putative glycerophosphoryl diester phosphodiesterase protein [Xanthomonas albilineans] Length = 305 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 136/267 (50%), Positives = 171/267 (64%), Gaps = 2/267 (0%) Query: 39 GPVLVSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDKTVDRTTNG 98 G LV SHR+CW SEN+LDGI CIA G+D+ EIDVRTTRDGALVLMHD+TVDRTT+G Sbjct: 34 GEALVVSHRACWKFASENTLDGIAACIARGVDMVEIDVRTTRDGALVLMHDETVDRTTDG 93 Query: 99 HGAVADLTLAEIQALQLYARGGGKGASLTARRVPTLQEALAAARGRILLNLDVKAADIGP 158 HGAVADL A+I AL + ++GGG ++LT R PTL +ALA A G +L+NLDVKAA + Sbjct: 94 HGAVADLDAAQIAALHVRSQGGGSASTLTERHPPTLTQALALAHGHVLVNLDVKAASLDQ 153 Query: 159 MVAAILETDTARDVLLNINAGVDAQQVAWARSLGIAVQTLYFDEKTGASARSGQLQTMAR 218 ++ + RDVLLN+ V + A IAVQ LY + S + L+ A Sbjct: 154 IMDEVEAAGAQRDVLLNVPLDVPEAVLQRAHKADIAVQALYSQRDSALSPQQA-LRHAAA 212 Query: 219 QEPTVLQIIFRDPAVVGEAVQAIGRRPVRLLVNTMAIDIDSGRPMDLAGPYLDTVAVVHP 278 P V+Q++F DPAV+G A + + + RL VNTM DI SGRPM L+ Y D A+ P Sbjct: 213 LRPAVVQLMFDDPAVLGIAQRELAQH-ARLFVNTMTSDIASGRPMRLSAHYTDQGALRDP 271 Query: 279 EQVWGKLIASGVSIIQTDEPQRLLAWL 305 VWG L GVS+IQTDE L +L Sbjct: 272 ASVWGALRNYGVSMIQTDEVLALQHYL 298 >ref|ZP_02242084.1| hypothetical protein Xoryp_05275 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 264 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 114/253 (45%), Positives = 164/253 (64%), Gaps = 2/253 (0%) Query: 54 SENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDKTVDRTTNGHGAVADLTLAEIQAL 113 +ENS+ GI CIA GID+ E+D+RTTRDG LVLMHD+ VDRTTNG GAVADLT +I++L Sbjct: 4 AENSIAGIDACIAHGIDMVEVDLRTTRDGQLVLMHDERVDRTTNGEGAVADLTAVQIESL 63 Query: 114 QLYARGGGKGASLTARRVPTLQEALAAARGRILLNLDVKAADIGPMVAAILETDTARDVL 173 + A GGG A++TA PT +ALAAA G+ L+NLD+KAA + ++ + RDVL Sbjct: 64 HIRAEGGGAQAAVTAWHPPTFAQALAAAHGKTLINLDIKAASLDQVMDEVQAAGAQRDVL 123 Query: 174 LNINAGVDAQQVAWARSLGIAVQTLYFDEKTGASARSGQLQTMARQEPTVLQIIFRDPAV 233 +N+ A + A GIA+Q LY +++ + A +P LQ++F D +V Sbjct: 124 MNVPLDAPASAIERAHRAGIALQVLY-EQRQSQHTPEQAFRMAAAMQPAALQLMFDDISV 182 Query: 234 VGEAVQAIGRRPVRLLVNTMAIDIDSGRPMDLAGPYLDTVAVVHPEQVWGKLIASGVSII 293 + ++ + I +RL VNTM+ DI SG PM+L+G + D A+ P +WG L A G+S+I Sbjct: 183 I-DSARRISHGQIRLFVNTMSNDIASGTPMNLSGDFTDARALRAPNAIWGALRARGISMI 241 Query: 294 QTDEPQRLLAWLK 306 QTD+P +L+ +L+ Sbjct: 242 QTDQPLQLVQYLR 254 >ref|YP_449949.1| hypothetical protein XOO_0920 [Xanthomonas oryzae pv. oryzae MAFF 311018] dbj|BAE67675.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 242 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 90/196 (45%), Positives = 123/196 (62%), Gaps = 1/196 (0%) Query: 42 LVSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDKTVDRTTNGHGA 101 LV SHR CW +ENS+ GI CIA GID+ E+D+RTTRDG LVLMHD+ VDR TNG GA Sbjct: 42 LVVSHRGCWMLAAENSIAGIDACIAHGIDMVEVDLRTTRDGQLVLMHDERVDRITNGEGA 101 Query: 102 VADLTLAEIQALQLYARGGGKGASLTARRVPTLQEALAAARGRILLNLDVKAADIGPMVA 161 VADLT +I++L + A GGG A++TA PT +ALAAA G+ L+NLD+KAA + ++ Sbjct: 102 VADLTAVQIESLHIRAEGGGAQAAVTAWHPPTFAQALAAAHGKTLINLDIKAASLDQVMD 161 Query: 162 AILETDTARDVLLNINAGVDAQQVAWARSLGIAVQTLYFDEKTGASARSGQLQTMARQEP 221 + RDVL+N+ A + A GIA+Q LY +++ + A +P Sbjct: 162 EVQAAGAQRDVLMNVPLDAPASTIERAHRAGIALQVLY-EQRQSQHTPEQAFRMAAAMQP 220 Query: 222 TVLQIIFRDPAVVGEA 237 LQ++F D +V+ A Sbjct: 221 AALQLMFDDVSVIDSA 236 >ref|YP_199657.1| glycerophosphodiester phosphodiesterase [Xanthomonas oryzae pv. oryzae KACC10331] gb|AAW74272.1| glycerophosphodiester phosphodiesterase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 245 Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 90/196 (45%), Positives = 123/196 (62%), Gaps = 1/196 (0%) Query: 42 LVSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDKTVDRTTNGHGA 101 LV SHR CW +ENS+ GI CIA GID+ E+D+RTTRDG LVLMHD+ VDR TNG GA Sbjct: 45 LVVSHRGCWMLAAENSIAGIDACIAHGIDMVEVDLRTTRDGQLVLMHDERVDRITNGEGA 104 Query: 102 VADLTLAEIQALQLYARGGGKGASLTARRVPTLQEALAAARGRILLNLDVKAADIGPMVA 161 VADLT +I++L + A GGG A++TA PT +ALAAA G+ L+NLD+KAA + ++ Sbjct: 105 VADLTAVQIESLHIRAEGGGAQAAVTAWHPPTFAQALAAAHGKTLINLDIKAASLDQVMD 164 Query: 162 AILETDTARDVLLNINAGVDAQQVAWARSLGIAVQTLYFDEKTGASARSGQLQTMARQEP 221 + RDVL+N+ A + A GIA+Q LY +++ + A +P Sbjct: 165 EVQAAGAQRDVLMNVPLDAPASTIERAHRAGIALQVLY-EQRQSQHTPEQAFRMAAAMQP 223 Query: 222 TVLQIIFRDPAVVGEA 237 LQ++F D +V+ A Sbjct: 224 AALQLMFDDVSVIDSA 239