BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2762.p (215 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004681367.1| GlpP family transcriptional regulator [Cupri... 248 5e-64 ref|YP_840717.1| GlpP family transcriptional regulator [Ralstoni... 246 2e-63 ref|YP_004027744.1| glycerol uptake operon antiterminator regula... 241 6e-62 ref|YP_372834.1| glycerol-3-phosphate responsive antiterminator ... 233 1e-59 ref|ZP_08872046.1| GlpP family transcriptional regulator, partia... 232 2e-59 >ref|YP_004681367.1| GlpP family transcriptional regulator [Cupriavidus necator N-1] gb|AEI80135.1| transcriptional regulator GlpP family [Cupriavidus necator N-1] Length = 194 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 124/194 (63%), Positives = 161/194 (82%) Query: 21 LDESLLARLKRHPIMAAVYGLHYLPAFLDSAAEVAIVAHVELRQLQAMIATVKAAGKFLM 80 +D SL ARL RHP++ +YG+ + A +S AEV IVA+VELR+LQ +IAT+ +AGK+++ Sbjct: 1 MDRSLGARLTRHPVIGTLYGVDQIDAIFESVAEVCIVANVELRKLQPVIATLASAGKYVI 60 Query: 81 LNVDTCEGLAQDKAAIDYLVEIGVPALVSTRVSTLLRASRAGMITMQKVFVTDRTTWPRS 140 +N+D+CEGL+QDK +DYL +IGV +LVSTRV+T+ RA+RAGM+TMQKVFVTDR+TWPRS Sbjct: 61 VNIDSCEGLSQDKGGVDYLADIGVTSLVSTRVATIQRANRAGMVTMQKVFVTDRSTWPRS 120 Query: 141 LKALEQSSPNLVQLMPAPMLAMVKPADRELLPPIVASGFVCNEHDARTALATGAVALSTS 200 +KALEQS PNLVQLMPAPML+ + ADR+ LPPIV SGFVCN D R+ALA GAVA+STS Sbjct: 121 VKALEQSDPNLVQLMPAPMLSHLPEADRKALPPIVTSGFVCNRDDIRSALAHGAVAVSTS 180 Query: 201 DQGMWNLSGKMLRA 214 D+ +WNL + L+A Sbjct: 181 DRKLWNLEARALKA 194 >ref|YP_840717.1| GlpP family transcriptional regulator [Ralstonia eutropha H16] emb|CAJ95987.1| transcriptional regulator, GlpP-family [Ralstonia eutropha H16] Length = 194 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 123/194 (63%), Positives = 161/194 (82%) Query: 21 LDESLLARLKRHPIMAAVYGLHYLPAFLDSAAEVAIVAHVELRQLQAMIATVKAAGKFLM 80 +D SL ARL RHP++ +YG+ + A +S AEV IVA+VELR+LQ +IAT+ +AGK+++ Sbjct: 1 MDRSLGARLTRHPVIGTLYGVDQIDAIFESVAEVCIVANVELRKLQPVIATLASAGKYVI 60 Query: 81 LNVDTCEGLAQDKAAIDYLVEIGVPALVSTRVSTLLRASRAGMITMQKVFVTDRTTWPRS 140 +N+D+CEGL+QDK ++YL +IGV +LVSTRV+T+ RA+RAGM+TMQKVFVTDR+TWPRS Sbjct: 61 VNIDSCEGLSQDKGGVEYLADIGVTSLVSTRVATIQRANRAGMVTMQKVFVTDRSTWPRS 120 Query: 141 LKALEQSSPNLVQLMPAPMLAMVKPADRELLPPIVASGFVCNEHDARTALATGAVALSTS 200 +KALEQS PNLVQLMPAPML+ + ADR+ LPPIV SGFVCN D R+ALA GAVA+STS Sbjct: 121 VKALEQSDPNLVQLMPAPMLSHLPEADRKALPPIVTSGFVCNRDDIRSALAQGAVAVSTS 180 Query: 201 DQGMWNLSGKMLRA 214 D+ +WNL + L+A Sbjct: 181 DRKLWNLEARALKA 194 >ref|YP_004027744.1| glycerol uptake operon antiterminator regulatory protein [Burkholderia rhizoxinica HKI 454] emb|CBW73600.1| Glycerol uptake operon antiterminator regulatory protein [Burkholderia rhizoxinica HKI 454] Length = 191 Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 121/188 (64%), Positives = 157/188 (83%) Query: 21 LDESLLARLKRHPIMAAVYGLHYLPAFLDSAAEVAIVAHVELRQLQAMIATVKAAGKFLM 80 +D+SL ARL RHP++A +YG L +F+ SAAEV IVA+VELR+LQA++A + AGK ++ Sbjct: 1 MDKSLGARLARHPVIATLYGAEQLDSFISSAAEVGIVANVELRKLQAVVAALTRAGKCVI 60 Query: 81 LNVDTCEGLAQDKAAIDYLVEIGVPALVSTRVSTLLRASRAGMITMQKVFVTDRTTWPRS 140 +N+D+C+GL+QDK +DYLV+IGV +LVSTRV+T+ RA+RAG++TMQKVFVTDR+TWPRS Sbjct: 61 VNIDSCDGLSQDKGGVDYLVDIGVTSLVSTRVATVQRANRAGLMTMQKVFVTDRSTWPRS 120 Query: 141 LKALEQSSPNLVQLMPAPMLAMVKPADRELLPPIVASGFVCNEHDARTALATGAVALSTS 200 +KA+EQS PNLVQLMPAPML ++ DR LPPIVASGF+CNEHD R A GAVA+STS Sbjct: 121 VKAIEQSDPNLVQLMPAPMLPHLREQDRAALPPIVASGFICNEHDVRQAQTHGAVAVSTS 180 Query: 201 DQGMWNLS 208 D +WNL+ Sbjct: 181 DSQLWNLT 188 >ref|YP_372834.1| glycerol-3-phosphate responsive antiterminator (mRNA-binding)-like [Burkholderia sp. 383] gb|ABB12190.1| Glycerol-3-phosphate responsive antiterminator (mRNA-binding)-like protein [Burkholderia sp. 383] Length = 191 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 118/187 (63%), Positives = 154/187 (82%) Query: 21 LDESLLARLKRHPIMAAVYGLHYLPAFLDSAAEVAIVAHVELRQLQAMIATVKAAGKFLM 80 +D+SL ARL RHP++A +YG+ +F+DSAAEV IVA+V+LR+LQA++ + AGKF++ Sbjct: 1 MDKSLGARLARHPVIATLYGVEQADSFIDSAAEVGIVANVDLRRLQAVVVALARAGKFVI 60 Query: 81 LNVDTCEGLAQDKAAIDYLVEIGVPALVSTRVSTLLRASRAGMITMQKVFVTDRTTWPRS 140 +N+D+C+GL+QDK ++YL +IGV +LVSTRV+T+ RA+RAG+ITMQKVFVTDR+TWPRS Sbjct: 61 VNIDSCDGLSQDKGGVEYLADIGVASLVSTRVATIQRANRAGLITMQKVFVTDRSTWPRS 120 Query: 141 LKALEQSSPNLVQLMPAPMLAMVKPADRELLPPIVASGFVCNEHDARTALATGAVALSTS 200 +KA+EQS PNLVQLMPAPMLA + ADR+ LPPIVASGFV N D R+A GAVA+STS Sbjct: 121 VKAIEQSDPNLVQLMPAPMLAHLSEADRQALPPIVASGFVGNADDVRSARRHGAVAVSTS 180 Query: 201 DQGMWNL 207 D WN Sbjct: 181 DSAWWNF 187 >ref|ZP_08872046.1| GlpP family transcriptional regulator, partial [Verminephrobacter sp. At4] Length = 190 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 119/189 (62%), Positives = 157/189 (83%) Query: 25 LLARLKRHPIMAAVYGLHYLPAFLDSAAEVAIVAHVELRQLQAMIATVKAAGKFLMLNVD 84 L ARL +HP++A +YG+ + F+ S AEV+IVA+VELR+L+A+IAT+ AGK+ ++N+D Sbjct: 1 LGARLTKHPVIATLYGVEQIEIFVASEAEVSIVANVELRKLKAVIATLTKAGKYAIVNID 60 Query: 85 TCEGLAQDKAAIDYLVEIGVPALVSTRVSTLLRASRAGMITMQKVFVTDRTTWPRSLKAL 144 + EGL+QD+ ++YL +IGV +LVSTRV+T+ RA+RA M+TMQKVFVTDR+TWPRS+KAL Sbjct: 61 SSEGLSQDRGGVEYLADIGVSSLVSTRVATIQRANRAAMVTMQKVFVTDRSTWPRSVKAL 120 Query: 145 EQSSPNLVQLMPAPMLAMVKPADRELLPPIVASGFVCNEHDARTALATGAVALSTSDQGM 204 EQS PNLVQLMPAPMLA + ADR+ LPPIVASGFVCN D R+A+A GA+A+STSD G+ Sbjct: 121 EQSDPNLVQLMPAPMLAHICEADRKALPPIVASGFVCNPEDIRSAIAHGALAISTSDSGL 180 Query: 205 WNLSGKMLR 213 WNL K +R Sbjct: 181 WNLPAKAIR 189