BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2756.p (244 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776035.1| branched-chain amino acid ABC transporter AT... 427 e-118 ref|YP_004753575.1| urea ABC transporter ATPase protein UrtE [Co... 373 e-101 ref|ZP_08276249.1| Urea ABC transporter, ATPase protein UrtE [Ox... 367 1e-99 ref|YP_004355041.1| High-affinity branched-chain amino acid ABC ... 358 3e-97 ref|NP_793836.1| branched-chain amino acid ABC transporter ATP-b... 355 4e-96 >ref|YP_003776035.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ64127.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 229 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 226/229 (98%), Positives = 228/229 (99%) Query: 16 MFKVSQLASGYGQSKVIHDVDLSVAKEEIVAVMGRNGMGKTTLFKTLMGILPLRGGSISI 75 MFKVSQLASGYGQSKVIHDVDLSVAKEEIVAVMGRNGMGKTTLFKTLMGILPLRGGSISI Sbjct: 1 MFKVSQLASGYGQSKVIHDVDLSVAKEEIVAVMGRNGMGKTTLFKTLMGILPLRGGSISI 60 Query: 76 DGVELGGLESHQRVERGVAYVPQGRMIFSHMTVLENIQTGLPASAKGKVPDELYSLFPVL 135 DGVELG LESHQRVERGVAYVPQGRMIFSHMTVLENIQTGLPA+AKGKVPDELYSLFPVL Sbjct: 61 DGVELGSLESHQRVERGVAYVPQGRMIFSHMTVLENIQTGLPAAAKGKVPDELYSLFPVL 120 Query: 136 YDMRTRKGGNLSGGQQQQLAIARALATNPRVLLLDEPTEGIQPSIIKDIAKSLKEIRKIR 195 YDMRTRKGGNLSGGQQQQLAIARALATNPRVLLLDEPTEGIQPSIIKDIA+SLKEIRKIR Sbjct: 121 YDMRTRKGGNLSGGQQQQLAIARALATNPRVLLLDEPTEGIQPSIIKDIARSLKEIRKIR 180 Query: 196 ALTIVVSEQVLSFTLEIADRFLVIDKGRFVYEDTRENVDAPTISKYLSV 244 ALTIVVSEQVLSFTLEIADRFLVIDKGRFVYEDTRENVDAPTISKYLSV Sbjct: 181 ALTIVVSEQVLSFTLEIADRFLVIDKGRFVYEDTRENVDAPTISKYLSV 229 >ref|YP_004753575.1| urea ABC transporter ATPase protein UrtE [Collimonas fungivorans Ter331] gb|AEK62752.1| Urea ABC transporter, ATPase protein UrtE [Collimonas fungivorans Ter331] Length = 229 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 197/229 (86%), Positives = 210/229 (91%) Query: 16 MFKVSQLASGYGQSKVIHDVDLSVAKEEIVAVMGRNGMGKTTLFKTLMGILPLRGGSISI 75 MF VS LASGYGQS+VIHDV L+ K+EIVAVMGRNGMGKTTLFKTLMGILPLR GSI I Sbjct: 1 MFNVSHLASGYGQSQVIHDVSLAAGKQEIVAVMGRNGMGKTTLFKTLMGILPLREGSIQI 60 Query: 76 DGVELGGLESHQRVERGVAYVPQGRMIFSHMTVLENIQTGLPASAKGKVPDELYSLFPVL 135 DG ELG LES+QRV GVAYVPQGRMIF MTVLENIQTGLPASA GKVPDELY+LFPVL Sbjct: 61 DGQELGHLESYQRVASGVAYVPQGRMIFPGMTVLENIQTGLPASALGKVPDELYALFPVL 120 Query: 136 YDMRTRKGGNLSGGQQQQLAIARALATNPRVLLLDEPTEGIQPSIIKDIAKSLKEIRKIR 195 ++MR RKGGNLSGGQQQQLAIARALATNP+VLLLDEPTEGIQPSIIKDIA+SLKEIRK+R Sbjct: 121 HEMRGRKGGNLSGGQQQQLAIARALATNPKVLLLDEPTEGIQPSIIKDIARSLKEIRKLR 180 Query: 196 ALTIVVSEQVLSFTLEIADRFLVIDKGRFVYEDTRENVDAPTISKYLSV 244 LTI+VSEQVLSFTLEIADRFLVIDKGRFVYEDT + VDA TIS+YLSV Sbjct: 181 QLTIIVSEQVLSFTLEIADRFLVIDKGRFVYEDTSDKVDAATISRYLSV 229 >ref|ZP_08276249.1| Urea ABC transporter, ATPase protein UrtE [Oxalobacteraceae bacterium IMCC9480] gb|EGF30277.1| Urea ABC transporter, ATPase protein UrtE [Oxalobacteraceae bacterium IMCC9480] Length = 229 Score = 367 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 186/229 (81%), Positives = 210/229 (91%) Query: 16 MFKVSQLASGYGQSKVIHDVDLSVAKEEIVAVMGRNGMGKTTLFKTLMGILPLRGGSISI 75 M ++ L SGYGQS+VIHD++L+ K EIVA+MGRNGMGKTTLFKTLMG+LP R GSI I Sbjct: 1 MLSITNLVSGYGQSQVIHDINLNAGKNEIVAIMGRNGMGKTTLFKTLMGVLPKRSGSIRI 60 Query: 76 DGVELGGLESHQRVERGVAYVPQGRMIFSHMTVLENIQTGLPASAKGKVPDELYSLFPVL 135 E+GG+ES+QRVE G+AYVPQGRMIFS+MTVLENIQTGLPA A+GKVP+ELY+LFPVL Sbjct: 61 GDQEIGGMESYQRVESGIAYVPQGRMIFSNMTVLENIQTGLPAKARGKVPEELYALFPVL 120 Query: 136 YDMRTRKGGNLSGGQQQQLAIARALATNPRVLLLDEPTEGIQPSIIKDIAKSLKEIRKIR 195 +DMR+RKGGNLSGGQQQQLAIARALAT P+VLLLDEPTEGIQPSIIKDIA++LKEIR +R Sbjct: 121 FDMRSRKGGNLSGGQQQQLAIARALATEPKVLLLDEPTEGIQPSIIKDIARNLKEIRTMR 180 Query: 196 ALTIVVSEQVLSFTLEIADRFLVIDKGRFVYEDTRENVDAPTISKYLSV 244 LTI+VSEQVLSFTL+IADRFLVIDKGRFVYEDTR NVDAPTISKYLSV Sbjct: 181 QLTIIVSEQVLSFTLDIADRFLVIDKGRFVYEDTRANVDAPTISKYLSV 229 >ref|YP_004355041.1| High-affinity branched-chain amino acid ABC transporter ATP-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA70037.1| putative High-affinity branched-chain amino acid ABC transporter, ATP-binding component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 229 Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 180/229 (78%), Positives = 209/229 (91%) Query: 16 MFKVSQLASGYGQSKVIHDVDLSVAKEEIVAVMGRNGMGKTTLFKTLMGILPLRGGSISI 75 MF V +L+ GYGQS+++HD+DL+VAK EIVAVMGRNGMGKTTLFK+LMGILP G +S+ Sbjct: 1 MFNVDKLSCGYGQSQILHDLDLAVAKREIVAVMGRNGMGKTTLFKSLMGILPQWRGQVSV 60 Query: 76 DGVELGGLESHQRVERGVAYVPQGRMIFSHMTVLENIQTGLPASAKGKVPDELYSLFPVL 135 DG E+ LE+H+RVE G+AYVPQGRMIF MTVLENIQTGLPASA+G+VP++LY+LFPVL Sbjct: 61 DGQEVSNLETHERVEHGIAYVPQGRMIFPSMTVLENIQTGLPASARGQVPEDLYALFPVL 120 Query: 136 YDMRTRKGGNLSGGQQQQLAIARALATNPRVLLLDEPTEGIQPSIIKDIAKSLKEIRKIR 195 +DMR+RKGGNLSGGQQQQLAIARALATNP+VLLLDEPTEGIQPSIIKDIA++LKEIR +R Sbjct: 121 HDMRSRKGGNLSGGQQQQLAIARALATNPKVLLLDEPTEGIQPSIIKDIARTLKEIRHLR 180 Query: 196 ALTIVVSEQVLSFTLEIADRFLVIDKGRFVYEDTRENVDAPTISKYLSV 244 LTIVVSEQVLSFTLEIADRFLVI+KGRFV E+TR+ VD TIS+YLSV Sbjct: 181 DLTIVVSEQVLSFTLEIADRFLVIEKGRFVIEETRDKVDEATISRYLSV 229 >ref|NP_793836.1| branched-chain amino acid ABC transporter ATP-binding protein [Pseudomonas syringae pv. tomato str. DC3000] ref|ZP_03397770.1| branched-chain amino acid ABC transporter, ATP-binding protein [Pseudomonas syringae pv. tomato T1] ref|ZP_07233194.1| branched-chain amino acid ABC transporter, ATP-binding protein [Pseudomonas syringae pv. tomato Max13] ref|ZP_07252271.1| branched-chain amino acid ABC transporter, ATP-binding protein [Pseudomonas syringae pv. tomato K40] ref|ZP_07256808.1| branched-chain amino acid ABC transporter, ATP-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gb|AAO57531.1| branched-chain amino acid ABC transporter, ATP-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gb|EEB59289.1| branched-chain amino acid ABC transporter, ATP-binding protein [Pseudomonas syringae pv. tomato T1] gb|EGH97359.1| branched-chain amino acid ABC transporter, ATP-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 229 Score = 355 bits (910), Expect = 4e-96, Method: Composition-based stats. Identities = 178/229 (77%), Positives = 206/229 (89%) Query: 16 MFKVSQLASGYGQSKVIHDVDLSVAKEEIVAVMGRNGMGKTTLFKTLMGILPLRGGSISI 75 MF ++QLA GYGQS+++HD+DL V K+EIVAVMGRNGMGKTTLFK+LMGILP GG +++ Sbjct: 1 MFAINQLACGYGQSQILHDLDLKVEKQEIVAVMGRNGMGKTTLFKSLMGILPQWGGQVTV 60 Query: 76 DGVELGGLESHQRVERGVAYVPQGRMIFSHMTVLENIQTGLPASAKGKVPDELYSLFPVL 135 GV++ +E+H RVE G+AYVPQGRMIF MTVLENIQTGLPASAKGKVPD+LY+LFPVL Sbjct: 61 AGVDISAMETHARVEHGMAYVPQGRMIFPAMTVLENIQTGLPASAKGKVPDDLYALFPVL 120 Query: 136 YDMRTRKGGNLSGGQQQQLAIARALATNPRVLLLDEPTEGIQPSIIKDIAKSLKEIRKIR 195 +DMR R+GGNLSGGQQQQLAIARALAT P+VLLLDEPTEGIQPSIIKDIA++LKEIR + Sbjct: 121 FDMRGRRGGNLSGGQQQQLAIARALATKPKVLLLDEPTEGIQPSIIKDIARTLKEIRSLH 180 Query: 196 ALTIVVSEQVLSFTLEIADRFLVIDKGRFVYEDTRENVDAPTISKYLSV 244 LTIVVSEQVLSFTLEIADRFLVI+KGRFV E++R NVD TIS+YLSV Sbjct: 181 DLTIVVSEQVLSFTLEIADRFLVIEKGRFVVEESRANVDEATISRYLSV 229