BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2755.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776036.1| branched-chain amino acid ABC transporter AT... 473 e-131 ref|YP_004753576.1| urea ABC transporter ATPase protein UrtD [Co... 434 e-120 ref|ZP_08276250.1| Urea ABC transporter, ATPase protein UrtD [Ox... 421 e-116 gb|AEA83420.1| branched-chain amino acid ABC transporter, ATP-bi... 400 e-109 ref|YP_004355042.1| High-affinity branched-chain amino acid ABC ... 398 e-109 >ref|YP_003776036.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ64128.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 253/255 (99%), Positives = 255/255 (100%) Query: 1 MSENAIGFESDAHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGAGKTTVLDL 60 MSENAIGFESDAHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGAGKTTVLDL Sbjct: 1 MSENAIGFESDAHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGAGKTTVLDL 60 Query: 61 ICGKTRATSGSIKFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGRK 120 ICGKTRATSGSIKFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGRK Sbjct: 61 ICGKTRATSGSIKFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGRK 120 Query: 121 VFGALTFKRSPDVVARVEAVAAEIFLDQQLHTQADLLSHGQKQWLEIGMLLMQEPELLML 180 VFGALTFKRSPDVVARVEAVAAEIFL++QLHTQADLLSHGQKQWLEIGMLLMQEPELLML Sbjct: 121 VFGALTFKRSPDVVARVEAVAAEIFLEEQLHTQADLLSHGQKQWLEIGMLLMQEPELLML 180 Query: 181 DEPVAGMSVSEREKTAELLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSME 240 DEPVAGMSVSEREKTAELLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSME Sbjct: 181 DEPVAGMSVSEREKTAELLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSME 240 Query: 241 KVQSDPKVIDVYLGH 255 KVQSDPKVIDVYLGH Sbjct: 241 KVQSDPKVIDVYLGH 255 >ref|YP_004753576.1| urea ABC transporter ATPase protein UrtD [Collimonas fungivorans Ter331] gb|AEK62753.1| Urea ABC transporter, ATPase protein UrtD [Collimonas fungivorans Ter331] Length = 255 Score = 434 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 222/255 (87%), Positives = 237/255 (92%) Query: 1 MSENAIGFESDAHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGAGKTTVLDL 60 MS N IGFES+ PVLAIEDLTVSFDGFKAVD LN YV+RNEVRVVIGPNGAGKTTVLDL Sbjct: 1 MSGNPIGFESNDRPVLAIEDLTVSFDGFKAVDGLNFYVERNEVRVVIGPNGAGKTTVLDL 60 Query: 61 ICGKTRATSGSIKFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGRK 120 ICGKT+AT+GSI+F N ELTKM EH IV+ GVGRKFQTPSIYENLSVFENLEMSFPRGRK Sbjct: 61 ICGKTQATAGSIQFKNRELTKMREHEIVQAGVGRKFQTPSIYENLSVFENLEMSFPRGRK 120 Query: 121 VFGALTFKRSPDVVARVEAVAAEIFLDQQLHTQADLLSHGQKQWLEIGMLLMQEPELLML 180 VFGAL FKR+ +VV RVEAVA EIFLD QL+ QADLLSHGQKQWLEIGMLLMQEPELLML Sbjct: 121 VFGALVFKRTAEVVERVEAVAREIFLDAQLYQQADLLSHGQKQWLEIGMLLMQEPELLML 180 Query: 181 DEPVAGMSVSEREKTAELLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSME 240 DEPVAGMSVSEREKTAELLGRIS+GRSV+VIEHDM+FVKSIAHKVTVLHQGKILAEGSME Sbjct: 181 DEPVAGMSVSEREKTAELLGRISKGRSVLVIEHDMEFVKSIAHKVTVLHQGKILAEGSME 240 Query: 241 KVQSDPKVIDVYLGH 255 VQ++PKVI+VYLGH Sbjct: 241 SVQANPKVIEVYLGH 255 >ref|ZP_08276250.1| Urea ABC transporter, ATPase protein UrtD [Oxalobacteraceae bacterium IMCC9480] gb|EGF30278.1| Urea ABC transporter, ATPase protein UrtD [Oxalobacteraceae bacterium IMCC9480] Length = 255 Score = 421 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 212/255 (83%), Positives = 231/255 (90%) Query: 1 MSENAIGFESDAHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGAGKTTVLDL 60 MS IG ++ PVLA+E LTVSFDGFKAVD LNLYV RNEV VVIGPNGAGKTTVLDL Sbjct: 1 MSNAPIGVKNPNRPVLAVEGLTVSFDGFKAVDNLNLYVNRNEVHVVIGPNGAGKTTVLDL 60 Query: 61 ICGKTRATSGSIKFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGRK 120 ICGKT+AT+GSI+FN ELTKM+E+ IVR GVGRKFQTPSIYENLSVF+NLEMSFPRGR Sbjct: 61 ICGKTQATAGSIRFNERELTKMAEYDIVRAGVGRKFQTPSIYENLSVFDNLEMSFPRGRS 120 Query: 121 VFGALTFKRSPDVVARVEAVAAEIFLDQQLHTQADLLSHGQKQWLEIGMLLMQEPELLML 180 VFGAL F+RS DV+ARV VAAEIFL +QLH QADLLSHGQKQWLEIGMLLMQEPELLML Sbjct: 121 VFGALVFERSADVIARVNEVAAEIFLSEQLHAQADLLSHGQKQWLEIGMLLMQEPELLML 180 Query: 181 DEPVAGMSVSEREKTAELLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSME 240 DEPVAGMSVSER KTAELLGRISQGRSV+VIEHDM+FVKSIAH+VTVLHQGK+LAEGSME Sbjct: 181 DEPVAGMSVSERSKTAELLGRISQGRSVLVIEHDMEFVKSIAHRVTVLHQGKVLAEGSME 240 Query: 241 KVQSDPKVIDVYLGH 255 VQ++PKVI+VYLGH Sbjct: 241 SVQANPKVIEVYLGH 255 >gb|AEA83420.1| branched-chain amino acid ABC transporter, ATP-binding protein [Pseudomonas stutzeri DSM 4166] Length = 252 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 205/249 (82%), Positives = 223/249 (89%), Gaps = 1/249 (0%) Query: 7 GFESDAHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGAGKTTVLDLICGKTR 66 GF+S PVLAIE LTVSFDGFKAVD LNLY+ RNEVRVVIGPNGAGKTT+LDLICGKTR Sbjct: 5 GFQS-PKPVLAIEGLTVSFDGFKAVDDLNLYLDRNEVRVVIGPNGAGKTTLLDLICGKTR 63 Query: 67 ATSGSIKFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGRKVFGALT 126 AT+GSI+FN ELT+M E IVR GVGRKFQ PSIYENLSVFENLEMS+P GRKVFGAL Sbjct: 64 ATAGSIEFNGRELTRMKEFDIVRAGVGRKFQNPSIYENLSVFENLEMSYPAGRKVFGALF 123 Query: 127 FKRSPDVVARVEAVAAEIFLDQQLHTQADLLSHGQKQWLEIGMLLMQEPELLMLDEPVAG 186 FKRS DV+ARVE VAAEI L QLH +A LLSHGQKQWLEIGMLLMQEPELLMLDEPVAG Sbjct: 124 FKRSADVIARVEEVAAEIGLADQLHDEAGLLSHGQKQWLEIGMLLMQEPELLMLDEPVAG 183 Query: 187 MSVSEREKTAELLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSMEKVQSDP 246 MSVSER +TAELL RISQGRSV+VIEHDM+FVKSIAH+VTVLHQG++LAEGSME VQ +P Sbjct: 184 MSVSERAQTAELLKRISQGRSVLVIEHDMEFVKSIAHRVTVLHQGRLLAEGSMEAVQKNP 243 Query: 247 KVIDVYLGH 255 KV++VYLGH Sbjct: 244 KVVEVYLGH 252 >ref|YP_004355042.1| High-affinity branched-chain amino acid ABC transporter ATP-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA70038.1| putative High-affinity branched-chain amino acid ABC transporter, ATP-binding component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 252 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 204/251 (81%), Positives = 224/251 (89%), Gaps = 1/251 (0%) Query: 5 AIGFESDAHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGAGKTTVLDLICGK 64 A+GF+ + PVL IE LTVSFDGFKAVD LNLY+ RNEVRVVIGPNGAGKTTVLDLICGK Sbjct: 3 AVGFQMNK-PVLVIEGLTVSFDGFKAVDNLNLYIDRNEVRVVIGPNGAGKTTVLDLICGK 61 Query: 65 TRATSGSIKFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGRKVFGA 124 TRATSGSI+F+ ELTKM E+ IVR GVGRKFQ PSIYENL+VFENLEMS+P GRKVFGA Sbjct: 62 TRATSGSIQFDGKELTKMREYNIVRAGVGRKFQNPSIYENLTVFENLEMSYPAGRKVFGA 121 Query: 125 LTFKRSPDVVARVEAVAAEIFLDQQLHTQADLLSHGQKQWLEIGMLLMQEPELLMLDEPV 184 L FKRS V+ARVE VA EIFL + L QADLLSHGQKQWLEIGMLLMQ P+LLMLDEPV Sbjct: 122 LFFKRSAAVIARVEEVAREIFLGELLQQQADLLSHGQKQWLEIGMLLMQNPDLLMLDEPV 181 Query: 185 AGMSVSEREKTAELLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSMEKVQS 244 AGMSV+ER +TAELL RISQGRSV+VIEHDM+FVKSIAHKVTVLHQGK+LAEGSME VQ+ Sbjct: 182 AGMSVNERVQTAELLKRISQGRSVLVIEHDMEFVKSIAHKVTVLHQGKVLAEGSMESVQN 241 Query: 245 DPKVIDVYLGH 255 +PKVI+VYLGH Sbjct: 242 NPKVIEVYLGH 252