BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2749.p (1067 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776040.1| sensor histidine kinase/response regulator p... 1941 0.0 ref|YP_004753580.1| two-component hybrid sensor and regulator [C... 1529 0.0 ref|YP_004355046.1| histidine kinase, Hybrid [Pseudomonas brassi... 1177 0.0 gb|AEA83416.1| sensor histidine kinase/response regulator [Pseud... 1152 0.0 ref|ZP_07233199.1| sensor histidine kinase/response regulator [P... 1150 0.0 >ref|YP_003776040.1| sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64132.1| sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1145 Score = 1941 bits (5027), Expect = 0.0, Method: Composition-based stats. Identities = 1000/1067 (93%), Positives = 1026/1067 (96%), Gaps = 3/1067 (0%) Query: 1 MVLFFATGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTFIFFALEAAIMAQ 60 ++LFF TGLPI YYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTFIFFALEAAIMAQ Sbjct: 82 VLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTFIFFALEAAIMAQ 141 Query: 61 AIEIYFGLPLVYGYVLCSLIIIPMVAYGITLINRLQMWTQPLWLVLLVLPYACVLYKEPE 120 AIEIYFGLPLVYGYVLCS+IIIPMVAYGITLINRLQMWTQPLWLVLLVLPY CVLYKEP+ Sbjct: 142 AIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLWLVLLVLPYVCVLYKEPD 201 Query: 121 ALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDFLRFLPQKTAANRGRWWS 180 ALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDFLRFLPQKT ANRGRWWS Sbjct: 202 ALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDFLRFLPQKTPANRGRWWS 261 Query: 181 ALLLAGPGWILLGGAKMLGGTLLAFLAIQHEVPMARAVEPTQMYLIGYQYVFGNPAFALG 240 ALLLAGPGWILLGGAKMLGG LLAFLAIQHEVPMARAVEPTQMYL+GYQYVFGNPA ALG Sbjct: 262 ALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVEPTQMYLVGYQYVFGNPALALG 321 Query: 241 AVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVFNVLIAVLLMELGVFN 300 AVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVFNVLIAVLLMELGVFN Sbjct: 322 AVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVFNVLIAVLLMELGVFN 381 Query: 301 ALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAHLYDVNPVGVGSMVIATL 360 ALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAHLYDVNPVGVG+M IATL Sbjct: 382 ALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAHLYDVNPVGVGAMAIATL 441 Query: 361 LSTLAMSGVLGKTIAAMAPFIALGTALVTAPLIALATGSRYYIARRDTLSEQNYRPVTPG 420 LSTLAMSGVLGKT+AAMAPFIALGTAL +APLIALATGSRYYIARRDTL+EQNYRPVTPG Sbjct: 442 LSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGSRYYIARRDTLAEQNYRPVTPG 501 Query: 421 QAHSVLDCVICGNAFETPDMAHCPAYQGAICSLCCSLDARCKDRCKTPRARLPNQILHTL 480 QA VL C ICGNAFETPDMAHCPAYQGAICSLCCSLDARCKDRCKTPRARLPNQILHTL Sbjct: 502 QAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDARCKDRCKTPRARLPNQILHTL 561 Query: 481 RQLIPARFALKLNTRIGHYLSVFGLLAGGLAIVLWMLYFQQMADLSGLSLSAPDSLRGVF 540 RQLIPARFA+KLNTRIGHYLSVFGLLAGGLA+VLWMLYFQQMADLSG L AP SLR VF Sbjct: 562 RQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYFQQMADLSGSGLDAPASLRSVF 621 Query: 541 IKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQEIEAHKQTDAELQRAKEAA 600 IKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQEIEAHKQTDAELQRAKEAA Sbjct: 622 IKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQEIEAHKQTDAELQRAKEAA 681 Query: 601 ESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKEAIAIIRRSGEHLLSLI 660 ESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARK+AI +IRRSGEHLLSLI Sbjct: 682 ESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKDAIGVIRRSGEHLLSLI 741 Query: 661 DGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRFEKSGRLPQIVHAD 720 DGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRF+KSGRLPQIVHAD Sbjct: 742 DGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRFDKSGRLPQIVHAD 801 Query: 721 QKRLRQILINLLGNAVKFTDHGGVTLKLRYAREIAYFDVIDSGIGIADEDLERIFLPFER 780 QKRLRQILINLLGNAVKFTDHGGVTL+LRYAREIAYFDVID+GIGIAD+D ERIFLPFER Sbjct: 802 QKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVIDTGIGIADDDRERIFLPFER 861 Query: 781 SSAANLREDIGTGLGLAISRMLVHIMGGELSVQSRVGHGSSFHLKIYLPEVHVPRPRIKL 840 SSAANLREDIGTGLGLAISRMLVHIMGGELSVQS+VG GSSFHLKIYLPEVHVPRPRIKL Sbjct: 862 SSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSSFHLKIYLPEVHVPRPRIKL 921 Query: 841 EDQMSGYTGPSRHILVVDDQASQRRLLKDMLMPLGFVVSEADSGLACMERLGREVPDLIL 900 EDQMSGY GPSRHILVVDDQASQRRLLKDMLMPLGF VSEADSGLACME LG +PDL+L Sbjct: 922 EDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVSEADSGLACMETLGHALPDLVL 981 Query: 901 LDIAMPQMDGWTVARAIRARGLAQLPILLVSANAFENLHERNEPPLVNDFVVKPVSYHEL 960 LDIAMPQMDGW+VARAIRARGLAQLPILLVSANAFENLHERNEPPLVNDFVVKPVSYHEL Sbjct: 982 LDIAMPQMDGWSVARAIRARGLAQLPILLVSANAFENLHERNEPPLVNDFVVKPVSYHEL 1041 Query: 961 LGKIRQHLQLDWVASILPPVPAEVPPTPAAPQALMLVPPQDKLAALLELGSIGYAKEILR 1020 LGKIRQHLQLDWVA+ P APQALMLVP Q+KLA LLELGSIGYAKEI+R Sbjct: 1042 LGKIRQHLQLDWVAAA---DAPTPAAPPPAPQALMLVPTQEKLATLLELGSIGYAKEIVR 1098 Query: 1021 QLDAMERQQPAYLPFTTELRQLVKQFRLNEYVTRIKELIRHDLNDVR 1067 QLDA+ERQ PAYLPFTTELRQLV+QFRLNEYVTRIKELIRHDLNDVR Sbjct: 1099 QLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKELIRHDLNDVR 1145 >ref|YP_004753580.1| two-component hybrid sensor and regulator [Collimonas fungivorans Ter331] gb|AEK62757.1| Two-component hybrid sensor and regulator [Collimonas fungivorans Ter331] Length = 1181 Score = 1529 bits (3959), Expect = 0.0, Method: Composition-based stats. Identities = 781/1060 (73%), Positives = 903/1060 (85%), Gaps = 14/1060 (1%) Query: 2 VLFFATGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTFIFFALEAAIMAQA 61 +LFF TGLPISYYAA+YGVDMDLLTRGAGFGYIGSTITSLIYA+FTFIFFA+EA+IMAQA Sbjct: 124 ILFFLTGLPISYYAAKYGVDMDLLTRGAGFGYIGSTITSLIYATFTFIFFAVEASIMAQA 183 Query: 62 IEIYFGLPLVYGYVLCSLIIIPMVAYGITLINRLQMWTQPLWLVLLVLPYACVLYKEPEA 121 IE+YFGLPLV GY++C+L++IP+V YGITLINRLQMWTQPLWLVLLVLPY CVL+KEP+A Sbjct: 184 IELYFGLPLVLGYIICALVVIPLVTYGITLINRLQMWTQPLWLVLLVLPYVCVLHKEPDA 243 Query: 122 LSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDFLRFLPQKTAANRGRWWSA 181 L+NLM+FAGRAE GSSF+L LFG+AATVAFSLIAQ+GEQVDFLRFLP+KT+ANR RWWSA Sbjct: 244 LANLMTFAGRAENGSSFDLVLFGSAATVAFSLIAQIGEQVDFLRFLPEKTSANRYRWWSA 303 Query: 182 LLLAGPGWILLGGAKMLGGTLLAFLAIQHEVPMARAVEPTQMYLIGYQYVFGNPAFALGA 241 LLLAGPGWILLG AKMLGG LLAFLAIQHEVP+ +AVEPTQMYLI Y+YVF +PA L A Sbjct: 304 LLLAGPGWILLGAAKMLGGALLAFLAIQHEVPIGKAVEPTQMYLIAYRYVFSDPALVLAA 363 Query: 242 VVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVFNVLIAVLLMELGVFNA 301 V L VVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVFNVLIA+LLME+GVFNA Sbjct: 364 VTLLVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVFNVLIALLLMEIGVFNA 423 Query: 302 LEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAHLYDVNPVGVGSMVIATLL 361 LEHVLALY+LVAISWIGAVV+DLVINKPL LSP HIEFKRAHLYD+NPVGVG+M+IA+ L Sbjct: 424 LEHVLALYALVAISWIGAVVSDLVINKPLGLSPPHIEFKRAHLYDINPVGVGAMLIASAL 483 Query: 362 STLAMSGVLGKTIAAMAPFIALGTALVTAPLIALATGSRYYIARRDTLSEQNYRPVTPGQ 421 S LA+SG+ G A+APFIALG+AL+ AP+IA AT +YYIAR D L++ + Sbjct: 484 SALALSGMFGSVARALAPFIALGSALLIAPVIAYATKGKYYIARHDQLADSH-------- 535 Query: 422 AHSVLDCVICGNAFETPDMAHCPAYQGAICSLCCSLDARCKDRCKTPRARLPNQILHTLR 481 H L+CVICGN FETPDMAHCPAYQGAICSLCCSLDARC DRCK +R+P+QI +TLR Sbjct: 536 -HGQLECVICGNHFETPDMAHCPAYQGAICSLCCSLDARCNDRCKEA-SRMPDQIFNTLR 593 Query: 482 QLIPARFALKLNTRIGHYLSVFGLLAGGLAIVLWMLYFQQMADLSGLSLSAPDSLRGVFI 541 +P RF LKLNTRIGHYL VF L++GGLA+VLW+LY+QQ+A +SGL+ PDS+ G+FI Sbjct: 594 GFLPERFTLKLNTRIGHYLIVFSLVSGGLAVVLWLLYYQQLAGMSGLAGGGPDSMAGIFI 653 Query: 542 KLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQEIEAHKQTDAELQRAKEAAE 601 KLF LLV +GVG+WWLVLTNESR+VA EESERQTNLLLQEI+AH QTDA LQRAKEAAE Sbjct: 654 KLFASLLVFIGVGSWWLVLTNESRSVAHEESERQTNLLLQEIDAHNQTDAALQRAKEAAE 713 Query: 602 SANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKEAIAIIRRSGEHLLSLID 661 +ANLAKSRFV GMSHELRTPLNSILGYAQIL VD IP R++AI +IRRSGEHLLSLID Sbjct: 714 AANLAKSRFVTGMSHELRTPLNSILGYAQILQVDHAIPEGRRDAIGVIRRSGEHLLSLID 773 Query: 662 GLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRFEKSGRLPQIVHADQ 721 GLLDIAKIEAGKMRLA+DEL L FL+QIV MFAPQAEQKGL FRFEK GR+P++V DQ Sbjct: 774 GLLDIAKIEAGKMRLATDELPLHEFLDQIVQMFAPQAEQKGLAFRFEKIGRIPEVVQVDQ 833 Query: 722 KRLRQILINLLGNAVKFTDHGGVTLKLRYAREIAYFDVIDSGIGIADEDLERIFLPFERS 781 KRLRQILINLLGNAVKFTD G VTL++R+AREI YF+V DSGIGIA+ED+ R+FLPFERS Sbjct: 834 KRLRQILINLLGNAVKFTDAGHVTLRVRHAREITYFEVEDSGIGIAEEDIARVFLPFERS 893 Query: 782 SAANLREDIGTGLGLAISRMLVHIMGGELSVQSRVGHGSSFHLKIYLPEVHVPRPRIKLE 841 +AANLREDIGTGLGLAIS ML HIMGG LSV S +G GS+F LKIYL EV PR RIKLE Sbjct: 894 NAANLREDIGTGLGLAISSMLTHIMGGALSVASDIGKGSTFQLKIYLSEVRAPRRRIKLE 953 Query: 842 DQMSGYTGPSRHILVVDDQASQRRLLKDMLMPLGFVVSEADSGLACMERLGREVPDLILL 901 DQMSGY GP + ILVVDDQASQR +L ML PLGF +SE SG AC+ + R +PD++LL Sbjct: 954 DQMSGYLGPRKRILVVDDQASQRAVLSAMLAPLGFDISEVASGAACLAEIARAMPDMVLL 1013 Query: 902 DIAMPQMDGWTVARAIRARGLAQLPILLVSANAFENLHERNEPPLVNDFVVKPVSYHELL 961 DIAMP MDG V RAIR++G A LPI++VSANAFE+ ++ +P NDFVVKPVS+++LL Sbjct: 1014 DIAMPAMDGGAVCRAIRSQGHASLPIIIVSANAFESTPQQIDPLSYNDFVVKPVSFNDLL 1073 Query: 962 GKIRQHLQLDWVASILPPVPAEVPPTPAAPQALMLVPPQDKLAALLELGSIGYAKEILRQ 1021 KIR HL++DW++ + AA A+++VP ++KL ALLELG+IGY K I+ + Sbjct: 1074 SKIRLHLKVDWISDPA----PQAAAGAAAGSAILVVPAREKLQALLELGAIGYIKGIVGK 1129 Query: 1022 LDAMERQQPAYLPFTTELRQLVKQFRLNEYVTRIKELIRH 1061 LD +E+Q P Y PFT ELR+LVK+FRLN+Y R++ L+ Sbjct: 1130 LDEIEQQDPLYQPFTRELRELVKRFRLNDYSARLQALLHQ 1169 >ref|YP_004355046.1| histidine kinase, Hybrid [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA70042.1| putative Histidine kinase, Hybrid [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 1131 Score = 1177 bits (3045), Expect = 0.0, Method: Composition-based stats. Identities = 614/1057 (58%), Positives = 759/1057 (71%), Gaps = 19/1057 (1%) Query: 2 VLFFATGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTFIFFALEAAIMAQA 61 ++ F TGLP+SYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTF+FFALEAAIMA A Sbjct: 83 LIIFLTGLPVSYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTFLFFALEAAIMALA 142 Query: 62 IEIYFGLPLVYGYVLCSLIIIPMVAYGITLINRLQMWTQPLWLVLLVLPYACVLYKEPEA 121 +E+YF +PL + YV+CS+++IP+VAYG+TLI+RLQ+WTQPLWL LLVLPY VL K PEA Sbjct: 143 LELYFHIPLAFAYVICSVLVIPLVAYGVTLISRLQLWTQPLWLALLVLPYLFVLLKNPEA 202 Query: 122 LSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDFLRFLPQKTAANRGRWWSA 181 S+ SF GR G FNL F AA TVA SL+ Q+GEQVD+LRFLP+KTAANR RWW+A Sbjct: 203 FSDWTSFQGRDTGGGDFNLLAFCAACTVALSLVTQIGEQVDYLRFLPEKTAANRKRWWAA 262 Query: 182 LLLAGPGWILLGGAKMLGGTLLAFLAIQHEVPMARAVEPTQMYLIGYQYVFGNPAFALGA 241 LL AGPGWIL G KM G LAFLA+QHE+P+ RA EPTQMYL+ + YVF +P +AL A Sbjct: 263 LLCAGPGWILPGALKMFAGAFLAFLALQHEIPIERATEPTQMYLVAFGYVFASPEWALAA 322 Query: 242 VVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVFNVLIAVLLMELGVFNA 301 +VLFV VSQ+KIN+TNAYAGSLAWSNFFAR+THSHPGRVVWLVFNV IA++LMELGVF+ Sbjct: 323 MVLFVFVSQMKINLTNAYAGSLAWSNFFARVTHSHPGRVVWLVFNVAIALMLMELGVFDV 382 Query: 302 LEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAHLYDVNPVGVGSMVIATLL 361 ++ VL LY+ +AI+WIG+VVADLVINKPL LSP HIEFKRAHLYD+NPVGVGSM+IA+LL Sbjct: 383 IDQVLGLYANIAIAWIGSVVADLVINKPLGLSPKHIEFKRAHLYDINPVGVGSMLIASLL 442 Query: 362 STLAMSGVLGKTIAAMAPFIALGTALVTAPLIALATGSRYYIAR-RDTLSEQNYRPVTPG 420 S LA G+ G A PF+ALGT+LV PL+A AT SRYYIAR D L Q PV P Sbjct: 443 SVLAHFGLFGALAQAAPPFVALGTSLVMTPLLAWATRSRYYIARTSDPLLLQ---PVAPS 499 Query: 421 QAHSVLDCVICGNAFETPDMAHCPAYQGAICSLCCSLDARCKDRCKTPRARLPNQILHTL 480 + + C +C N FET DMA CPAY ICSLCCSLDARC DRCK P RL Q L Sbjct: 500 ---TQITCGLCSNPFETADMAFCPAYSTPICSLCCSLDARCGDRCK-PHGRLSAQFEALL 555 Query: 481 RQLIPARFALKLNTRIGHYLSVFGLLAGGLAIVLWMLYFQQMADLSGLSLSAPDSLRGVF 540 L+P +L+TR+ HYL + L L+ L ++Y Q L S A +L F Sbjct: 556 HWLLPNATVPRLHTRLVHYLGLLLALILMLSGALALIYGQASQGLPH-SPQAQATLYQAF 614 Query: 541 IKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQEIEAHKQTDAELQRAKEAA 600 K F L V+ + AWW+VLT ESR VAQEES+RQT LL+QEIEAH+ TD LQ AKEA+ Sbjct: 615 FKAFLTLSVLAAILAWWVVLTRESRHVAQEESDRQTQLLMQEIEAHRLTDQALQDAKEAS 674 Query: 601 ESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKEAIAIIRRSGEHLLSLI 660 E+AN AKSR+V G+SHELRTPLNSILG+ QIL DA +P ++A+A I RSG HLLSLI Sbjct: 675 EAANAAKSRYVTGLSHELRTPLNSILGFTQILQRDAAMPEQHQDALATILRSGSHLLSLI 734 Query: 661 DGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRFEKSGRLPQIVHAD 720 DGLLD+AKIEAGK+RL + E+ + + MF PQA KGL FR E G++P +V D Sbjct: 735 DGLLDVAKIEAGKLRLEATEIPFPELIHDLELMFTPQARDKGLRFRLELIGKMPAVVRGD 794 Query: 721 QKRLRQILINLLGNAVKFTDHGGVTLKLRYAREIAYFDVIDSGIGIADEDLERIFLPFER 780 +KR+RQILINLLGNAV FTD G V L++ Y RE A FD+ID+GIGI E +ERIF PFER Sbjct: 795 EKRVRQILINLLGNAVNFTDSGEVCLRVSYMRETATFDIIDTGIGIDPEHIERIFQPFER 854 Query: 781 SSAANLREDIGTGLGLAISRMLVHIMGGELSVQSRVGHGSSFHLKIYLPEVHVPRPRIKL 840 +R+D G GLGL I+RML +MGGEL V+S+ G+ F ++++L +V VP+ I + Sbjct: 855 GDL--MRQDKGVGLGLTITRMLTSLMGGELQVKSQQDKGTCFQVRLFLSQVRVPQAVIHV 912 Query: 841 EDQMSGYTGPSRHILVVDDQASQRRLLKDMLMPLGFVVSEADSGLACMERLGREVPDLIL 900 E + GY GP R +LVVDD R++L ML PLGF V +A +G + ++ PDLIL Sbjct: 913 EHDIIGYQGPRRLVLVVDDHVDHRKVLSGMLTPLGFEVVQASNGQEAIRQVALLGPDLIL 972 Query: 901 LDIAMPQMDGWTVARAIRARGLAQLPILLVSANAFENLHERNEPPLVNDFVVKPVSYHEL 960 +D++MP MDGW +R IR L+ PI+++SANAF + ER+ ND++ KPV EL Sbjct: 973 MDLSMPTMDGWETSRLIRRNALSTAPIIVISANAFNDERERSLASACNDYLAKPVHTPEL 1032 Query: 961 LGKIRQHLQLDWVASILPPVPAEVPPTPAAPQALMLVPPQDKLAALLELGSIGYAKEILR 1020 L +I++ L L W+ P PA P P ++P Q L AL EL +IGY + + Sbjct: 1033 LERIQKQLDLHWLRR-EKPAPATF-PEPG------ILPSQPDLIALGELSAIGYVRGLHE 1084 Query: 1021 QLDAMERQQPAYLPFTTELRQLVKQFRLNEYVTRIKE 1057 +LDA++ + PA PF + LR+L+K FRL+E +KE Sbjct: 1085 KLDAIQAETPATAPFISSLRKLLKNFRLDEINRALKE 1121 >gb|AEA83416.1| sensor histidine kinase/response regulator [Pseudomonas stutzeri DSM 4166] Length = 1135 Score = 1152 bits (2981), Expect = 0.0, Method: Composition-based stats. Identities = 611/1058 (57%), Positives = 762/1058 (72%), Gaps = 21/1058 (1%) Query: 2 VLFFATGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTFIFFALEAAIMAQA 61 ++ F TGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTF+FFALEAAIMA A Sbjct: 83 LVIFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTFLFFALEAAIMALA 142 Query: 62 IEIYFGLPLVYGYVLCSLIIIPMVAYGITLINRLQMWTQPLWLVLLVLPYACVLYKEPEA 121 +E+YF +PL YV+CS+II+P+V YGITLINRLQ+WTQPLWL LL+LPY V+ K P+A Sbjct: 143 LELYFSIPLALAYVVCSVIIVPLVTYGITLINRLQLWTQPLWLTLLLLPYVFVIAKNPDA 202 Query: 122 LSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDFLRFLPQKTAANRGRWWSA 181 L++L SFAGR G +FNL FGAA TVA +LI Q+GEQVD+LRFLP+KT NR RWW A Sbjct: 203 LADLTSFAGREGNGGAFNLLSFGAACTVALALITQIGEQVDYLRFLPEKTRQNRVRWWLA 262 Query: 182 LLLAGPGWILLGGAKMLGGTLLAFLAIQHEVPMARAVEPTQMYLIGYQYVFGNPAFALGA 241 +L AGPGWI+ G KML G LAFLA+QHE+P+ +A EPTQMYL+ + YVF +P +AL A Sbjct: 263 MLAAGPGWIIPGALKMLAGAFLAFLALQHEIPVDKAAEPTQMYLVAFSYVFASPEWALAA 322 Query: 242 VVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVFNVLIAVLLMELGVFNA 301 +VLFV+VSQ+KINVTNAYAGSLAWSNFFAR+THSHPGRVVWLVFNV IA++LMELGVF A Sbjct: 323 MVLFVIVSQVKINVTNAYAGSLAWSNFFARVTHSHPGRVVWLVFNVAIALMLMELGVFEA 382 Query: 302 LEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAHLYDVNPVGVGSMVIATLL 361 +E VL LY+ VAI+WIGA+VADLVINKPL LSP IEFKRAHLYD+NPVGVGSM+IA+LL Sbjct: 383 IEQVLGLYANVAIAWIGALVADLVINKPLGLSPRQIEFKRAHLYDINPVGVGSMLIASLL 442 Query: 362 STLAMSGVLGKTIAAMAPFIALGTALVTAPLIALATGSRYYIARRDTLSEQNYRPVTPGQ 421 + LA SG+LG+ A +P IALGTAL+ APLIA TG R+YIAR E+ + P Sbjct: 443 AILAHSGLLGELAQAASPVIALGTALLCAPLIAWLTGGRFYIAR-----ERQPELLYPYT 497 Query: 422 AHSVLDCVICGNAFETPDMAHCPAYQGAICSLCCSLDARCKDRCKTPRARLPNQILHTLR 481 + CV+C NAFE PD A CPAY ICSLCCSLDARC D CK P RL Q LR Sbjct: 498 ERGKIACVLCSNAFEEPDTAFCPAYGAPICSLCCSLDARCGDLCK-PHGRLSAQWDAFLR 556 Query: 482 QLIPARFALKLNTRIGHYLSVFGLLAGGLAIVLWMLYFQQMADLSGLSLSAPDSLRGVFI 541 P +L+TR+ HYL V GL+ G L++ LW++Y Q + ++L F+ Sbjct: 557 WAFPQVSIPRLHTRLAHYLGVLGLIIGLLSLALWLIYSQVSLSVVASPQETGETLYQAFL 616 Query: 542 KLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQEIEAHKQTDAELQRAKEAAE 601 K F +L + G+ AWW+VLT ESR VAQ+ES+RQT+LL+QEIEAH++TD +LQ+AKEA+E Sbjct: 617 KAFLVLSLFAGILAWWVVLTRESRHVAQQESDRQTHLLMQEIEAHRKTDEQLQKAKEASE 676 Query: 602 SANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKEAIAIIRRSGEHLLSLID 661 +AN AKSR+V G+SHELRTPLNSILGYAQIL D + P K+A+ I RSG HLLSLID Sbjct: 677 AANAAKSRYVTGLSHELRTPLNSILGYAQILLRDEAMAPRHKDALGTIHRSGAHLLSLID 736 Query: 662 GLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRFEKSGRLPQIVHADQ 721 GLLD+AKIEAGK+ L E+A FL+Q+ M APQAE+KGL F FE GR+P +V D+ Sbjct: 737 GLLDVAKIEAGKLNLEQSEIAFPEFLQQLRQMIAPQAEEKGLRFHFESQGRMPAVVRGDE 796 Query: 722 KRLRQILINLLGNAVKFTDHGGVTLKLRYAREIAYFDVIDSGIGIADEDLERIFLPFERS 781 KR+RQILINLLGNAV++TD G +TL+ Y RE A F++ D+GIGI E +ER+F PFER Sbjct: 797 KRVRQILINLLGNAVRYTDAGSITLRASYLRETATFEIADTGIGIPAEQIERLFQPFERG 856 Query: 782 SAANLREDIGTGLGLAISRMLVHIMGGELSVQSRVGHGSSFHLKIYLPEVHVPRPRIKLE 841 + LR+D G GLGL I+RML +MGGELSV+S+ G G+ F L+++L EV VP+ + +E Sbjct: 857 NP--LRQDNGLGLGLTITRMLTALMGGELSVKSQEGQGTVFQLRLFLSEVRVPQAVVHVE 914 Query: 842 DQMSGYTGPSRHILVVDDQASQRRLLKDMLMPLGFVVSEADSGLACMERLGREVPDLILL 901 + GY GP R +LVVDD R++L ML PLGF V A +G + + PDLIL+ Sbjct: 915 HDIVGYHGPRRRVLVVDDHIEHRKVLAGMLEPLGFEVLMASNGQEALSQASLHNPDLILM 974 Query: 902 DIAMPQMDGWTVARAIRARGLAQLPILLVSANAFENLHERNEPPLVNDFVVKPVSYHELL 961 D++MPQ+DGW AR +R + PIL++SANAF + + ND++ KPV LL Sbjct: 975 DLSMPQLDGWQTARLMRRSLGSSAPILIISANAFVDGGSVSAD--CNDYLPKPVHAPVLL 1032 Query: 962 GKIRQHLQLDWVASILPPVPAEVPPTPAAPQALMLVPPQDKLAALLELGSIGYAKEILRQ 1021 KI Q L L+W+ P P P A+ L P L AL + S+GY + ++ Sbjct: 1033 DKISQQLSLNWIRR---------APAPIQPPAISLAVP--ALQALQQQASLGYVRGVMEL 1081 Query: 1022 LDAMERQQPAYLPFTTELRQLVKQFRLNEYVTRIKELI 1059 LD ++ + PA LR L +F+LNE ++ E I Sbjct: 1082 LDRLQHEAPAAAAQVETLRGLAARFQLNELSRQLDEAI 1119 >ref|ZP_07233199.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. tomato Max13] ref|ZP_07252266.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. tomato K40] ref|ZP_07256803.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 1123 Score = 1150 bits (2976), Expect = 0.0, Method: Composition-based stats. Identities = 583/1058 (55%), Positives = 756/1058 (71%), Gaps = 21/1058 (1%) Query: 2 VLFFATGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTFIFFALEAAIMAQA 61 ++ F TGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTF+FFALEAAIMA A Sbjct: 83 LVIFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTFLFFALEAAIMALA 142 Query: 62 IEIYFGLPLVYGYVLCSLIIIPMVAYGITLINRLQMWTQPLWLVLLVLPYACVLYKEPEA 121 +E+YF +P+ Y++CS+I+IP+ YG+TLI+RLQMW+QPLWL LL++PY V++K P+A Sbjct: 143 LELYFHIPIALAYIICSIIVIPLAVYGVTLISRLQMWSQPLWLTLLLVPYVFVIWKNPDA 202 Query: 122 LSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDFLRFLPQKTAANRGRWWSA 181 L + +SF+GR EG +F+L FGAA +VA SL+ Q+GEQVD+LRFLP+KT NR RWW+A Sbjct: 203 LGDWLSFSGREGEGGTFDLLFFGAAFSVALSLVTQIGEQVDYLRFLPEKTRHNRKRWWAA 262 Query: 182 LLLAGPGWILLGGAKMLGGTLLAFLAIQHEVPMARAVEPTQMYLIGYQYVFGNPAFALGA 241 LL+AGPGWI+ G K++ G LAFLA+QHEVP+ RA EPTQMYL+ ++YVF +P +AL A Sbjct: 263 LLMAGPGWIIPGALKIMAGAFLAFLALQHEVPVERAAEPTQMYLVAFRYVFSSPEWALAA 322 Query: 242 VVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVFNVLIAVLLMELGVFNA 301 + LFV++SQIKIN+TNAYAGSLAWSNFF R+THSHPGRVVWLVFNV IA++LMELGVF+A Sbjct: 323 MTLFVIISQIKINMTNAYAGSLAWSNFFVRVTHSHPGRVVWLVFNVAIALVLMELGVFDA 382 Query: 302 LEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAHLYDVNPVGVGSMVIATLL 361 +E VL LY+ VAI+WIGA+VADLVINKP+ SP HIEFKRAHLYD+NPVGVG+M IA+L+ Sbjct: 383 IEQVLGLYANVAIAWIGALVADLVINKPMGWSPKHIEFKRAHLYDINPVGVGAMSIASLV 442 Query: 362 STLAMSGVLGKTIAAMAPFIALGTALVTAPLIALATGSRYYIARRDTLSEQNYRPVTPGQ 421 S A G+ G A P I+L ALVTAPL+A T +YYIAR T S+ P G+ Sbjct: 443 SFCAHFGLFGAIAQAAPPLISLAIALVTAPLLAWLTDGKYYIAR--TSSDTLLYP--QGR 498 Query: 422 AHSVLDCVICGNAFETPDMAHCPAYQGAICSLCCSLDARCKDRCKTPRARLPNQILHTLR 481 S+L C +C NAFETPDMA+CPAY+ ICSLCCSLDARC D+CK PRARL Q + Sbjct: 499 QESLL-CGLCNNAFETPDMAYCPAYRTPICSLCCSLDARCGDQCK-PRARLSMQFEDLIG 556 Query: 482 QLIPARFALKLNTRIGHYLSVFGLLAGGLAIVLWMLYFQQMADLSGLSLSAPDSLRGVFI 541 +++P L+TR+ YL + +L G + L ++Y Q L S A L F+ Sbjct: 557 KMLPRFPRHYLHTRLAQYLGLLTILVAGSSGALALIYNQVAHGLIDQSPEAHHLLMLAFL 616 Query: 542 KLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQEIEAHKQTDAELQRAKEAAE 601 K F + V GV AWW+VLT ESR VAQEESERQT+LL+QEI+AH++TD LQ+AKEA+E Sbjct: 617 KAFLTVCVFAGVLAWWVVLTRESRLVAQEESERQTSLLIQEIDAHEKTDQALQKAKEASE 676 Query: 602 SANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKEAIAIIRRSGEHLLSLID 661 +AN AKSR++ G+SHELRTPLNSILG+ QIL D T PP ++ +A I RS HLLSLI+ Sbjct: 677 AANAAKSRYITGLSHELRTPLNSILGFTQILQRDTTTPPHHQDPLATIMRSSSHLLSLIN 736 Query: 662 GLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRFEKSGRLPQIVHADQ 721 GLLD+AKIEAGK++L E+ + FL + MFA A++K L FR E GR+P +V D+ Sbjct: 737 GLLDVAKIEAGKLKLEPTEILFQEFLHDLEKMFAGTAQEKNLGFRLELEGRMPMVVRGDE 796 Query: 722 KRLRQILINLLGNAVKFTDHGGVTLKLRYAREIAYFDVIDSGIGIADEDLERIFLPFERS 781 KR+RQILINLLGNAV FTD G V L++ Y RE A FD++DSGIGIA E +ERIF PFER Sbjct: 797 KRVRQILINLLGNAVNFTDSGEVVLRVSYRRETAIFDIVDSGIGIAPEQIERIFQPFER- 855 Query: 782 SAANLREDIGTGLGLAISRMLVHIMGGELSVQSRVGHGSSFHLKIYLPEVHVPRPRIKLE 841 R D G GLGL I+RML +MGG LSV S G G+ F ++++L EV VP+ I + Sbjct: 856 -GGQTRHDNGVGLGLTITRMLTALMGGALSVSSTPGEGTHFKVRLFLSEVRVPKAVIDVN 914 Query: 842 DQMSGYTGPSRHILVVDDQASQRRLLKDMLMPLGFVVSEADSGLACMERLGREVPDLILL 901 + GY G R +LVVDD R+++ ML PLGF V++A++G+ + ++ PDLIL+ Sbjct: 915 HDVVGYDGERRLVLVVDDHIEHRKVISGMLEPLGFTVAQAENGMEAVRQVSLLHPDLILM 974 Query: 902 DIAMPQMDGWTVARAIRARGLAQLPILLVSANAFENLHERNEPPLVNDFVVKPVSYHELL 961 D++MP MDGW R IR + P++++SANA + + + +D++ KPV +LL Sbjct: 975 DLSMPDMDGWATLRMIRRNARSNAPVIVLSANA----NASTDDDIGHDYLSKPVHLRDLL 1030 Query: 962 GKIRQHLQLDWVASILPPVPAEVPPTPAAPQALMLVPPQDKLAALLELGSIGYAKEILRQ 1021 +++ HL L+W T + + ++PP++ L L L +GY + I + Sbjct: 1031 DRLKHHLNLNW---------QHRSRTASETKTPWILPPREDLEDLYTLCGLGYVRGIQNK 1081 Query: 1022 LDAMERQQPAYLPFTTELRQLVKQFRLNEYVTRIKELI 1059 LDA+E A F T+LR L K FRL+E +KE++ Sbjct: 1082 LDAIETSNIASGSFVTDLRALAKGFRLDELSLHLKEML 1119