BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2740.p (480 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776045.1| cobyric acid synthase [Herbaspirillum serope... 866 0.0 ref|YP_001099280.1| cobyric acid synthase [Herminiimonas arsenic... 673 0.0 ref|YP_001352791.1| cobyric acid synthase [Janthinobacterium sp.... 667 0.0 ref|YP_294891.1| cobyric acid synthase [Ralstonia eutropha JMP13... 627 e-177 ref|YP_002982144.1| cobyric acid synthase [Ralstonia pickettii 1... 624 e-176 >ref|YP_003776045.1| cobyric acid synthase [Herbaspirillum seropedicae SmR1] gb|ADJ64137.1| cobyric acid synthase protein [Herbaspirillum seropedicae SmR1] Length = 489 Score = 866 bits (2237), Expect = 0.0, Method: Composition-based stats. Identities = 444/478 (92%), Positives = 454/478 (94%) Query: 1 MIQGTTSDAGKSTLAAALCRLLKKDGIGVAPFKPQNMALNSAVTSDGGEIGRAQALQAQA 60 MIQGTTSDAGKSTLAAALCRLLKKDG+ VAPFKPQNMALNSAVTSDGGEIGRAQALQAQA Sbjct: 10 MIQGTTSDAGKSTLAAALCRLLKKDGVSVAPFKPQNMALNSAVTSDGGEIGRAQALQAQA 69 Query: 61 AGIAPHTDMNPVLLKPSSDTGAQVIVHGKVRADMNARDYHRYKTEAMQAVLQSYERLRTQ 120 AGIAPHTDMNPVLLKPSSDTGAQVIVHGKVRADMNARDYHRYKTEAMQAVLQSY RLR Q Sbjct: 70 AGIAPHTDMNPVLLKPSSDTGAQVIVHGKVRADMNARDYHRYKTEAMQAVLQSYARLRAQ 129 Query: 121 YACVIVEGAGSPAEINLRARDIANMGFAEAVDCPVIIVADIDRGGVFAHLTGTLDCLSES 180 YACVIVEGAGSPAEINLRARDIANMGFAEAVDCPVIIVADIDRGGVFAHLTGTLDCLSES Sbjct: 130 YACVIVEGAGSPAEINLRARDIANMGFAEAVDCPVIIVADIDRGGVFAHLTGTLDCLSES 189 Query: 181 ERERVIGFVINRFRGDISLLQGGLDWLEARTGKPVLAVLPYLHGLHLDAEDAVAATQESK 240 ER RVIGFVINRFRGDISLLQ GLDWLE RTGKPVLAVLPYLHGLHLDAEDAVAATQE K Sbjct: 190 ERARVIGFVINRFRGDISLLQAGLDWLEQRTGKPVLAVLPYLHGLHLDAEDAVAATQEVK 249 Query: 241 GDFRIVVPVFPRISNHTDFDALRAHPGVDLRFIGPGQPVPPADLIILPGSKNTRGDLRWL 300 GDFRIVVPVFPRISNHTDFDALRAHPGVDLRFIGPGQPVPPADLIILPGSKNTRGDLRWL Sbjct: 250 GDFRIVVPVFPRISNHTDFDALRAHPGVDLRFIGPGQPVPPADLIILPGSKNTRGDLRWL 309 Query: 301 REHGWDTAIARHLRYGGKLIGICGGFQMLGESVDDPHGVEGAPGSSAGLGLLPMRTELTR 360 REHGW+ AIARHLRYGGK+IGICGGFQMLGESVDDPHGVEGAPGSSAGLGLL MRTELTR Sbjct: 310 REHGWEAAIARHLRYGGKVIGICGGFQMLGESVDDPHGVEGAPGSSAGLGLLAMRTELTR 369 Query: 361 EKKLLQVVGQCAFAETAASVSGYEIHMGVSSGPALGRPAFVIDGRGEGAQSEDGQILGSY 420 +K+LLQV G CA + +A V GYEIHMGVSSG AL RPAFVI+GRGEGAQS DGQILGSY Sbjct: 370 DKRLLQVSGHCAVGDRSAPVRGYEIHMGVSSGAALARPAFVIEGRGEGAQSADGQILGSY 429 Query: 421 LHGMFDTPQAFGALLAWAGLAGTEPVDLDALREASLERLAESCRPLYDALQRVPTRFA 478 LHGMFDTPQA GALL WAGLAG EPVDLDALRE SLERLAESCRPLY+ALQR+PTRF Sbjct: 430 LHGMFDTPQALGALLDWAGLAGAEPVDLDALREVSLERLAESCRPLYEALQRLPTRFG 487 >ref|YP_001099280.1| cobyric acid synthase [Herminiimonas arsenicoxydans] sp|A4G3R6|COBQ_HERAR RecName: Full=Cobyric acid synthase emb|CAL61153.1| cobyric acid synthase [Herminiimonas arsenicoxydans] Length = 486 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 354/470 (75%), Positives = 393/470 (83%) Query: 1 MIQGTTSDAGKSTLAAALCRLLKKDGIGVAPFKPQNMALNSAVTSDGGEIGRAQALQAQA 60 M+QGTTSDAGK+TL AALCRLL + G+ V PFKPQNMALNSAVT+DGGEIGRAQALQA A Sbjct: 9 MVQGTTSDAGKTTLVAALCRLLAQQGVRVVPFKPQNMALNSAVTADGGEIGRAQALQAVA 68 Query: 61 AGIAPHTDMNPVLLKPSSDTGAQVIVHGKVRADMNARDYHRYKTEAMQAVLQSYERLRTQ 120 AG+ PHTDMNP+LLKPSSDTGAQVI+HG+ R DMNARDYH YK AMQAVL+SY RL Q Sbjct: 69 AGLPPHTDMNPILLKPSSDTGAQVIIHGRARNDMNARDYHAYKPIAMQAVLESYGRLSAQ 128 Query: 121 YACVIVEGAGSPAEINLRARDIANMGFAEAVDCPVIIVADIDRGGVFAHLTGTLDCLSES 180 Y V+VEGAGSPAE+NLR RDIANMGFAEAVDCPVI+VADIDRGGVFAH+ GTL CLSES Sbjct: 129 YETVLVEGAGSPAEVNLRDRDIANMGFAEAVDCPVILVADIDRGGVFAHIIGTLACLSES 188 Query: 181 ERERVIGFVINRFRGDISLLQGGLDWLEARTGKPVLAVLPYLHGLHLDAEDAVAATQESK 240 ER+R IGFVINRFRGDISLL+ GL WLE +TGKPVLAVLPYLHGL LDAEDAV TQ ++ Sbjct: 189 ERKRTIGFVINRFRGDISLLEPGLRWLEEQTGKPVLAVLPYLHGLFLDAEDAVEQTQTAR 248 Query: 241 GDFRIVVPVFPRISNHTDFDALRAHPGVDLRFIGPGQPVPPADLIILPGSKNTRGDLRWL 300 G FRIVVPV PRISNHTDFDALRAHP VDL+ IGPGQP+P ADLIILPGSKNTRGDL WL Sbjct: 249 GAFRIVVPVPPRISNHTDFDALRAHPDVDLQLIGPGQPIPAADLIILPGSKNTRGDLDWL 308 Query: 301 REHGWDTAIARHLRYGGKLIGICGGFQMLGESVDDPHGVEGAPGSSAGLGLLPMRTELTR 360 +GW A+ RH RYGGK+IGICGG+QMLG+++ DP GVEG PG S GL LL + T LT Sbjct: 309 IANGWREALIRHARYGGKIIGICGGYQMLGKTIADPQGVEGLPGISQGLALLDITTVLTP 368 Query: 361 EKKLLQVVGQCAFAETAASVSGYEIHMGVSSGPALGRPAFVIDGRGEGAQSEDGQILGSY 420 EK+L QV G CAFA+T A+VSGYEIHMG+S G A PAFVI GR EGA+S D QILGSY Sbjct: 369 EKQLEQVHGMCAFADTDAAVSGYEIHMGLSEGEACSHPAFVIAGRPEGARSADDQILGSY 428 Query: 421 LHGMFDTPQAFGALLAWAGLAGTEPVDLDALREASLERLAESCRPLYDAL 470 LHGMFDTP A ALL WAGL VD LREASL+R+A++ +PL DAL Sbjct: 429 LHGMFDTPSACSALLRWAGLDSDVAVDTARLREASLDRIAQAAQPLLDAL 478 >ref|YP_001352791.1| cobyric acid synthase [Janthinobacterium sp. Marseille] sp|A6SWZ4|COBQ_JANMA RecName: Full=Cobyric acid synthase gb|ABR89064.1| cobyric acid synthase [Janthinobacterium sp. Marseille] Length = 476 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 346/457 (75%), Positives = 388/457 (84%), Gaps = 2/457 (0%) Query: 1 MIQGTTSDAGKSTLAAALCRLLKKDGIGVAPFKPQNMALNSAVTSDGGEIGRAQALQAQA 60 M+QGTTSDAGK+TL AALCRLL ++G+ V PFKPQNMALNSAVT+DGGEIGRAQALQA A Sbjct: 1 MVQGTTSDAGKTTLVAALCRLLAQEGVRVVPFKPQNMALNSAVTADGGEIGRAQALQAVA 60 Query: 61 AGIAPHTDMNPVLLKPSSDTGAQVIVHGKVRADMNARDYHRYKTEAMQAVLQSYERLRTQ 120 AG+ PHTDMNP+LLKPSSDTGAQVI+HGK R+DMNARDYH YK AMQAVL+SY+RL+TQ Sbjct: 61 AGLQPHTDMNPILLKPSSDTGAQVIIHGKARSDMNARDYHAYKPIAMQAVLESYQRLQTQ 120 Query: 121 YACVIVEGAGSPAEINLRARDIANMGFAEAVDCPVIIVADIDRGGVFAHLTGTLDCLSES 180 Y V+VEGAGSPAE+NLR RDIANMGFAEAVDCPVI+VADIDRGGVFAH+ GTL CLSES Sbjct: 121 YESVLVEGAGSPAEVNLRERDIANMGFAEAVDCPVILVADIDRGGVFAHIIGTLACLSES 180 Query: 181 ERERVIGFVINRFRGDISLLQGGLDWLEARTGKPVLAVLPYLHGLHLDAEDAVAATQESK 240 ER R +GFVINRFRGDISLL+ GL WLE +TGKPVLAVLPYLHGL LDAEDAV TQ + Sbjct: 181 ERRRTVGFVINRFRGDISLLEPGLKWLEEQTGKPVLAVLPYLHGLFLDAEDAVEHTQAVR 240 Query: 241 GDFRIVVPVFPRISNHTDFDALRAHPGVDLRFIGPGQPVPPADLIILPGSKNTRGDLRWL 300 G FR+VVPV PRISNHTDFDALRAHP +DL+ +GPGQP+P ADLIILPGSKNTRGDL WL Sbjct: 241 GAFRVVVPVPPRISNHTDFDALRAHPEIDLQLVGPGQPIPAADLIILPGSKNTRGDLEWL 300 Query: 301 REHGWDTAIARHLRYGGKLIGICGGFQMLGESVDDPHGVEGAPGSSAGLGLLPMRTELTR 360 +GW A+ RHLRYGGK+IGICGG+QMLG +V DPHGVEG PG SAGLGLL + TELTR Sbjct: 301 IANGWREALLRHLRYGGKIIGICGGYQMLGMTVADPHGVEGTPGESAGLGLLDVATELTR 360 Query: 361 EKKLLQVVGQCAFAETAASVSGYEIHMGVSSGPALGRPAFVIDGRGEGAQSEDGQILGSY 420 +K+L QV G CAFA+ VSGYEIHMG S G A +PAF+IDGR EGA+S D Q+LG+Y Sbjct: 361 DKRLEQVSGVCAFADVG--VSGYEIHMGTSDGAARAQPAFLIDGRPEGARSADDQVLGTY 418 Query: 421 LHGMFDTPQAFGALLAWAGLAGTEPVDLDALREASLE 457 LHG+FDTP A ALL WAGL VD LREASL+ Sbjct: 419 LHGLFDTPDACAALLHWAGLNSDVRVDTAQLREASLQ 455 >ref|YP_294891.1| cobyric acid synthase [Ralstonia eutropha JMP134] sp|Q474Y6|COBQ_RALEJ RecName: Full=Cobyric acid synthase gb|AAZ60047.1| adenosylcobyric acid synthase (glutamine-hydrolysing) [Ralstonia eutropha JMP134] Length = 488 Score = 627 bits (1618), Expect = e-177, Method: Composition-based stats. Identities = 331/472 (70%), Positives = 378/472 (80%), Gaps = 10/472 (2%) Query: 1 MIQGTTSDAGKSTLAAALCRLLKKDGIGVAPFKPQNMALNSAVTSDGGEIGRAQALQAQA 60 M+QGTTSDAGKST+ A LCR+L + G+ VAPFKPQNMALNSAVT+DGGEIGRAQALQAQA Sbjct: 1 MVQGTTSDAGKSTVVAGLCRVLARAGMRVAPFKPQNMALNSAVTADGGEIGRAQALQAQA 60 Query: 61 AGIAPHTDMNPVLLKPSSDTGAQVIVHGKVRADMNARDYHRYKTEAMQAVLQSYERLRTQ 120 A + PHTDMNPVLLKPSSDTGAQ+I+HGK R D++AR YH YK EAM+AVL S+ERL Sbjct: 61 ARVEPHTDMNPVLLKPSSDTGAQIIIHGKARLDLDARAYHAYKPEAMKAVLASHERLTQA 120 Query: 121 YACVIVEGAGSPAEINLRARDIANMGFAEAVDCPVIIVADIDRGGVFAHLTGTLDCLSES 180 Y V+VEGAGSPAEINLR RDIANMGFAE VDCPV++VADIDRGGVFAHL GTLDCLS+S Sbjct: 121 YDVVVVEGAGSPAEINLRDRDIANMGFAERVDCPVVLVADIDRGGVFAHLVGTLDCLSDS 180 Query: 181 ERERVIGFVINRFRGDISLLQGGLDWLEARTGKPVLAVLPYLHGLHLDAEDAVAATQESK 240 ER RV GF+INRFRGDISLLQ GLDWLEARTGKPV VLPYLHGLHLDAEDA+ Q +K Sbjct: 181 ERARVTGFIINRFRGDISLLQPGLDWLEARTGKPVFGVLPYLHGLHLDAEDAIVGAQSAK 240 Query: 241 -----GDFRIVVPVFPRISNHTDFDALRAHPGVDLRFIGPGQPVPPADLIILPGSKNTRG 295 R++VPV PRISNHTDFDALRAHP VDLRFIGPG PVPPADL+ILPGSK+ R Sbjct: 241 RGTPDALLRVIVPVLPRISNHTDFDALRAHPQVDLRFIGPGMPVPPADLVILPGSKSVRA 300 Query: 296 DLRWLREHGWDTAIARHLRYGGKLIGICGGFQMLGESVDDPHGVEGAPGSSAGLGLLPMR 355 DL +LR +GW+ A+ RHLRYGGK+IGICGG QMLG + DP G EG GSSAG G L Sbjct: 301 DLDFLRANGWEPALRRHLRYGGKVIGICGGMQMLGRQIHDPAGHEGPAGSSAGFGWLDYE 360 Query: 356 TELTREKKLLQVVGQCAFAETAASVSGYEIHMGVSSGPALGRPAFVIDG-----RGEGAQ 410 T L K+L +V G+ A A+ A+VSGYEIHMGVS+G L RPA +D R +GA Sbjct: 361 TTLAPHKQLRRVSGRLADADREAAVSGYEIHMGVSTGSGLERPALWLDDENGTRRADGAC 420 Query: 411 SEDGQILGSYLHGMFDTPQAFGALLAWAGLAGTEPVDLDALREASLERLAES 462 SEDGQ+L +Y+HG+FD P A LL WAGL G + +DL ALREAS+ERLA++ Sbjct: 421 SEDGQVLATYVHGVFDEPTACEGLLRWAGLDGAQGIDLAALREASIERLADT 472 >ref|YP_002982144.1| cobyric acid synthase [Ralstonia pickettii 12D] gb|ACS63472.1| cobyric acid synthase CobQ [Ralstonia pickettii 12D] Length = 481 Score = 624 bits (1609), Expect = e-176, Method: Composition-based stats. Identities = 332/471 (70%), Positives = 377/471 (80%), Gaps = 5/471 (1%) Query: 1 MIQGTTSDAGKSTLAAALCRLLKKDGIGVAPFKPQNMALNSAVTSDGGEIGRAQALQAQA 60 MIQGTTSDAGKSTL A LCR+ + G+ VAPFKPQNMALNSAVT+DGGEIGRAQALQAQA Sbjct: 1 MIQGTTSDAGKSTLVAGLCRVAHRAGVRVAPFKPQNMALNSAVTADGGEIGRAQALQAQA 60 Query: 61 AGIAPHTDMNPVLLKPSSDTGAQVIVHGKVRADMNARDYHRYKTEAMQAVLQSYERLRTQ 120 AG+AP DMNPVLLKP+SDTGAQ+I+HG+ R D++AR YH YK AM AVL+S+ RLR + Sbjct: 61 AGVAPTVDMNPVLLKPNSDTGAQIIIHGQARCDLDARAYHDYKPTAMAAVLESHTRLRAR 120 Query: 121 YACVIVEGAGSPAEINLRARDIANMGFAEAVDCPVIIVADIDRGGVFAHLTGTLDCLSES 180 Y V+VEGAGSPAE+NLR RDIANMGFAEAVDCPV++VADIDRGGVFAHL GTL CLSES Sbjct: 121 YDLVLVEGAGSPAEVNLRDRDIANMGFAEAVDCPVVLVADIDRGGVFAHLLGTLACLSES 180 Query: 181 ERERVIGFVINRFRGDISLLQGGLDWLEARTGKPVLAVLPYLHGLHLDAEDAVAATQE-- 238 ER RV GFVINRFRGDISLL GLDWL A+TGKPV VLPYLHGLHLDAEDAV Q Sbjct: 181 ERARVAGFVINRFRGDISLLTPGLDWLTAQTGKPVFGVLPYLHGLHLDAEDAVQTAQRAA 240 Query: 239 SKGDFRIVVPVFPRISNHTDFDALRAHPGVDLRFIGPGQPVPPADLIILPGSKNTRGDLR 298 S R+V+PV PR+SNHTDFDALRAHP VD+R +GPGQP+PPADLIILPGSK+ + DL Sbjct: 241 SADALRVVIPVLPRVSNHTDFDALRAHPQVDVRLVGPGQPIPPADLIILPGSKSVQADLA 300 Query: 299 WLREHGWDTAIARHLRYGGKLIGICGGFQMLGESVDDPHGVEGAPGSSAGLGLLPMRTEL 358 WLR +GWD AIARHLRYGGKLIGICGG QMLG + DP+G+EGA GS GLG L T L Sbjct: 301 WLRANGWDAAIARHLRYGGKLIGICGGMQMLGRRLHDPNGLEGAAGSVQGLGYLDFETTL 360 Query: 359 TREKKLLQVVGQCAFAETAASVSGYEIHMGVSSGPALGRPAFVI-DGRGEGAQSEDGQIL 417 K+L QV G AE+ A++ GYEIHMGV+ G AL RPA + DGR +GA S DGQIL Sbjct: 361 EPAKQLRQVRG--TLAESGAAIDGYEIHMGVTVGAALARPAVQLDDGRADGAISADGQIL 418 Query: 418 GSYLHGMFDTPQAFGALLAWAGLAGTEPVDLDALREASLERLAESCRPLYD 468 +YLHG+FD P+A ALLAWAG++ D ALREASLERLA++C D Sbjct: 419 ATYLHGLFDAPEACRALLAWAGVSEARAQDYAALREASLERLADTCEAHLD 469