BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2719.p (269 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776062.1| integral membrane protein [Herbaspirillum se... 322 5e-86 ref|ZP_08783032.1| cobalt transporter, subunit CbtA [Methylobact... 195 8e-48 ref|YP_002278705.1| cobalt transporter subunit CbtA [Rhizobium l... 174 1e-41 ref|YP_001749638.1| cobalt transporter subunit CbtA [Pseudomonas... 170 2e-40 ref|ZP_04929246.1| hypothetical protein PACG_01875 [Pseudomonas ... 169 4e-40 >ref|YP_003776062.1| integral membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64154.1| integral membrane protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 322 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 200/248 (80%), Positives = 208/248 (83%), Gaps = 13/248 (5%) Query: 28 MASAVVVAGALSGVLLSGVQQFQVEKIILKAEEYEKAGESAAPAADDHAHEPAAQAAAHE 87 MASAVVVAGALSGVLLSGVQQFQVEK+IL+AE+YEKA E A AA AHE HE Sbjct: 1 MASAVVVAGALSGVLLSGVQQFQVEKLILQAEQYEKAAEEGASAAPQAAHE-------HE 53 Query: 88 HSHANAHEHEHAH------DANAWEPADGAERTGYTVLANVSMAVGFALLLVAAFALSGR 141 H A+ H AH DA+AWEPADGAERTGYTVLANVSMAVGFALLLVAA LSGR Sbjct: 54 HDQAHEHAAASAHAHEHSHDADAWEPADGAERTGYTVLANVSMAVGFALLLVAAITLSGR 113 Query: 142 QISWRSGLLWGLAGYGVFFVAPSLGLPPEVPGTLAAPLQARQLWWVMTAAMTAASLGLFV 201 Q+SWRSGLLWGLAGYGVFFVAPSLGLPPEVPGTLAAPLQARQ WWVMTA MTAASLGLFV Sbjct: 114 QVSWRSGLLWGLAGYGVFFVAPSLGLPPEVPGTLAAPLQARQFWWVMTAVMTAASLGLFV 173 Query: 202 FTRGWPWKLVGVMLLVVPHFIGAPQPEVHGSVAPEELAQAFIRATAAANAVFWLALGGLT 261 FTR W KL+ V LLVVPH +GAPQPEVHG VAPEELA AFIRATA ANAVFWLALGGLT Sbjct: 174 FTRAWWCKLLAVALLVVPHLVGAPQPEVHGGVAPEELAHAFIRATALANAVFWLALGGLT 233 Query: 262 GFFYRRFG 269 GFFYRRFG Sbjct: 234 GFFYRRFG 241 >ref|ZP_08783032.1| cobalt transporter, subunit CbtA [Methylobacter tundripaludum SV96] gb|EGW19677.1| cobalt transporter, subunit CbtA [Methylobacter tundripaludum SV96] Length = 225 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 124/247 (50%), Positives = 153/247 (61%), Gaps = 26/247 (10%) Query: 21 NWTVFRRMASAVVVAGALSGVLLSGVQQFQVEKIILKAEEYEKAGESAAPAADDHAHEPA 80 N T FR + A + G L+G+LL+ VQQ QV +LKAE YE+A + P+ + Sbjct: 3 NLTTFRELVIAALWTGLLAGLLLTAVQQIQVIPTLLKAEVYEEA--AVVPSTE------- 53 Query: 81 AQAAAHEHSHANAHEHEHAHDANAWEPADGAERTGYTVLANVSMAVGFALLLVAAFALSG 140 N+HEH W+P +G ERT +T +AN+S+ VGFALL+ A L G Sbjct: 54 -----------NSHEHHE------WQPENGWERTFFTAVANISLGVGFALLIGAVMCLRG 96 Query: 141 RQISWRSGLLWGLAGYGVFFVAPSLGLPPEVPGTLAAPLQARQLWWVMTAAMTAASLGLF 200 R +WR GLLWGLAGY FFVAPSLGLPPEVPGT AA L RQ WW++T T L L Sbjct: 97 RPGNWRMGLLWGLAGYLTFFVAPSLGLPPEVPGTEAARLADRQSWWLITVLDTGFGLSLL 156 Query: 201 VFTRGWPWKLVGVMLLVVPHFIGAPQPEVHGSVAPEELAQAFIRATAAANAVFWLALGGL 260 F + + G++LL PH I APQPEVH S AP ELAQ+FI AT ANAVFWLA+GGL Sbjct: 157 AFAKTRTNQFFGIVLLAAPHLISAPQPEVHSSAAPAELAQSFITATVFANAVFWLAIGGL 216 Query: 261 TGFFYRR 267 G FY++ Sbjct: 217 MGQFYKK 223 >ref|YP_002278705.1| cobalt transporter subunit CbtA [Rhizobium leguminosarum bv. trifolii WSM2304] gb|ACI57965.1| cobalt transporter, subunit CbtA [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 241 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 112/248 (45%), Positives = 151/248 (60%), Gaps = 12/248 (4%) Query: 23 TVFRRMASAVVVAGALSGVLLSGVQQFQVEKIILKAEEYEKAGESAAPAADDHAHEPAAQ 82 ++FR + V+AG++ G ++ VQ F ++I +AE YEKAGE++ A A Sbjct: 2 SLFRSIVFTAVLAGSIVGTAVTAVQFFGTSQLIARAEVYEKAGETSQAAD-----AEAVV 56 Query: 83 AAAHEHSHANAHEHEHAHDANAWEPADGAERTGYTVLANVSMAVGFALLLVAAFALSGRQ 142 AA H+H+ H+HE WEPADG ERT +T+ AN+ A+G+AL L ++ G+ Sbjct: 57 AAGHDHAAMADHDHEEG----GWEPADGVERTAFTLAANILTAIGYALALTGLISMRGKA 112 Query: 143 ISWRSGLLWGLAGYGVFFVAPSLGLPPEVPGTLAAPLQARQLWWVMTAAMTAASLGLFVF 202 I WR GL+WGLAG+ +AP LGLPPE+PGT +APL RQ+WW+ TA TA L L F Sbjct: 113 IGWREGLMWGLAGFACVMIAPMLGLPPELPGTPSAPLADRQVWWIATATATACGLALIAF 172 Query: 203 TRGWPWK-LVGVMLLVVPHFIGAP-QPEVHGSVAPEELAQAFIRATAAANAVFWLALGGL 260 R PW + ++L+ PH IGAP PE ++APE L FI A A + VFW LG L Sbjct: 173 HRK-PWTAVAAIVLIAAPHVIGAPAAPEGQHALAPEALEHQFIAAAAMTSLVFWALLGSL 231 Query: 261 TGFFYRRF 268 TG F+RRF Sbjct: 232 TGTFFRRF 239 >ref|YP_001749638.1| cobalt transporter subunit CbtA [Pseudomonas putida W619] gb|ACA73269.1| cobalt transporter, subunit CbtA [Pseudomonas putida W619] Length = 236 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 122/244 (50%), Positives = 155/244 (63%), Gaps = 12/244 (4%) Query: 24 VFRRMASAVVVAGALSGVLLSGVQQFQVEKIILKAEEYEKAGESAAPAADDHAHEPAAQA 83 + +R+A +G L+ +LL+ +Q F V +IL+AE YE SAAP+A+ H+H+ A Sbjct: 1 MIKRIARTAGFSGLLAALLLTLLQSFWVAPLILEAETYE----SAAPSAEHHSHDTQATV 56 Query: 84 AAHEHSHANAHEHEHAHDANAWEPADGAERTGYTVLANVSMAVGFALLLVAAFALSGRQI 143 H HA AHEH A+AW P DG +R T N+ +AVGFAL+L A ++L Sbjct: 57 G---HEHAAAHEHS----ADAWSPEDGWQRILSTTGGNLVVAVGFALILAALYSLREPN- 108 Query: 144 SWRSGLLWGLAGYGVFFVAPSLGLPPEVPGTLAAPLQARQLWWVMTAAMTAASLGLFVFT 203 +G LWGLAG+ VF +AP+LGLPPE+PGT AA L RQ WW+ TAA TA L L VF Sbjct: 109 RVTTGALWGLAGFAVFCLAPTLGLPPELPGTAAADLGQRQNWWIGTAAATALGLALLVFA 168 Query: 204 RGWPWKLVGVMLLVVPHFIGAPQPEVHGSVAPEELAQAFIRATAAANAVFWLALGGLTGF 263 R W K +G +LLVVPH IGAPQPEVH S+APE L F A+ NA FWLALG L+ + Sbjct: 169 RHWLLKALGAVLLVVPHLIGAPQPEVHQSLAPEALETQFKIASWVTNAAFWLALGLLSAW 228 Query: 264 FYRR 267 YRR Sbjct: 229 LYRR 232 >ref|ZP_04929246.1| hypothetical protein PACG_01875 [Pseudomonas aeruginosa C3719] gb|EAZ53365.1| hypothetical protein PACG_01875 [Pseudomonas aeruginosa C3719] Length = 364 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 106/204 (51%), Positives = 123/204 (60%), Gaps = 18/204 (8%) Query: 47 QQFQVEKIILKAEEYEKAGESAAPAADDHAHEPAAQAAAHEHSHANAHEHEHAHDANAWE 106 Q V +IL+AE YEK S AA H H P A H HD AWE Sbjct: 155 QILWVTPLILEAETYEK---SEPVAAQPHEHAPGVAA--------------HVHDEEAWE 197 Query: 107 PADGAERTGYTVLANVSMAVGFALLLVAAFALSGRQISWRSGLLWGLAGYGVFFVAPSLG 166 P DG +RT T N+ +AVGFAL+L F L +W+ GLLWGLAGY VF +APSLG Sbjct: 198 PEDGWQRTLSTTGGNLVVAVGFALMLAGLFTLRAPGQTWQ-GLLWGLAGYAVFCLAPSLG 256 Query: 167 LPPEVPGTLAAPLQARQLWWVMTAAMTAASLGLFVFTRGWPWKLVGVMLLVVPHFIGAPQ 226 LPPE+PGT AA L RQ WW+ TAA TA L L VF WP KLVG +LL +PH GAPQ Sbjct: 257 LPPELPGTAAADLVQRQYWWIATAAATAVGLALLVFGGNWPLKLVGAVLLALPHLFGAPQ 316 Query: 227 PEVHGSVAPEELAQAFIRATAAAN 250 PEVH S+APE LAQ F+ A+ +N Sbjct: 317 PEVHASLAPEALAQRFVVASLVSN 340