BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2713.p         (83 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_334412.1| hypothetical protein BURPS1710b_3035 [Burkholde...   109   1e-22
ref|YP_109147.1| hypothetical protein BPSL2550 [Burkholderia pse...    79   2e-13
ref|YP_442140.1| transglycosylase associated protein family [Bur...    75   5e-12
ref|YP_004359565.1| Transglycosylase-associated protein [Burkhol...    72   3e-11
ref|YP_001580567.1| transglycosylase-associated protein [Burkhol...    72   3e-11

>ref|YP_334412.1| hypothetical protein BURPS1710b_3035 [Burkholderia pseudomallei
           1710b]
 gb|ABA48358.1| putative membrane protein [Burkholderia pseudomallei 1710b]
          Length = 323

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 58/83 (69%), Positives = 74/83 (89%)

Query: 1   MEHGLIAWLIIGAVAGWLAGVLVKGGGFGLLADILIGIVGAVIGGWLAGLLGIAVGGGIL 60
           M HGLI WLIIGA+AGWLAG+LVKGGGFGLL DI++GIVGAVIGGWLAG+LGI +GGG +
Sbjct: 241 MAHGLIMWLIIGAIAGWLAGLLVKGGGFGLLVDIIVGIVGAVIGGWLAGILGIHIGGGFI 300

Query: 61  ASIVTATLGAIVLLVIVRAFRRA 83
           +S++ A +GA++LL ++R F+RA
Sbjct: 301 SSVIVAVIGAVILLFVIRLFKRA 323


>ref|YP_109147.1| hypothetical protein BPSL2550 [Burkholderia pseudomallei K96243]
 ref|YP_001079726.1| hypothetical protein BMA10247_0149 [Burkholderia mallei NCTC 10247]
 emb|CAH36558.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gb|ABO06917.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
          Length = 115

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 58/83 (69%), Positives = 74/83 (89%)

Query: 1   MEHGLIAWLIIGAVAGWLAGVLVKGGGFGLLADILIGIVGAVIGGWLAGLLGIAVGGGIL 60
           M HGLI WLIIGA+AGWLAG+LVKGGGFGLL DI++GIVGAVIGGWLAG+LGI +GGG +
Sbjct: 33  MAHGLIMWLIIGAIAGWLAGLLVKGGGFGLLVDIIVGIVGAVIGGWLAGILGIHIGGGFI 92

Query: 61  ASIVTATLGAIVLLVIVRAFRRA 83
           +S++ A +GA++LL ++R F+RA
Sbjct: 93  SSVIVAVIGAVILLFVIRLFKRA 115


>ref|YP_442140.1| transglycosylase associated protein family [Burkholderia
           thailandensis E264]
 gb|ABC39082.1| Transglycosylase associated protein family [Burkholderia
           thailandensis E264]
          Length = 117

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 58/83 (69%), Positives = 74/83 (89%)

Query: 1   MEHGLIAWLIIGAVAGWLAGVLVKGGGFGLLADILIGIVGAVIGGWLAGLLGIAVGGGIL 60
           M HGLI WLIIGA+AGWLAG+LVKGGGFGLL DI++GIVGAVIGGWLAG+LGI +GGG +
Sbjct: 35  MAHGLIMWLIIGAIAGWLAGLLVKGGGFGLLVDIIVGIVGAVIGGWLAGILGIHIGGGFI 94

Query: 61  ASIVTATLGAIVLLVIVRAFRRA 83
           +S++ A +GA++LL ++R F+RA
Sbjct: 95  SSVIVAVIGAVILLFVIRLFKRA 117


>ref|YP_004359565.1| Transglycosylase-associated protein [Burkholderia gladioli BSR3]
 gb|AEA59609.1| Transglycosylase-associated protein [Burkholderia gladioli BSR3]
          Length = 83

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 61/83 (73%), Positives = 73/83 (87%)

Query: 1  MEHGLIAWLIIGAVAGWLAGVLVKGGGFGLLADILIGIVGAVIGGWLAGLLGIAVGGGIL 60
          M HGLI WLIIGA+AGWLAG+LVKGGGFGL+ DI++GIVGAVIGGWLAG+LGI+VG G  
Sbjct: 1  MAHGLIMWLIIGAIAGWLAGLLVKGGGFGLIVDIIVGIVGAVIGGWLAGVLGISVGSGFF 60

Query: 61 ASIVTATLGAIVLLVIVRAFRRA 83
          ASI+ A +GA++LL I+R FRRA
Sbjct: 61 ASIIVAVIGAVILLFIIRLFRRA 83


>ref|YP_001580567.1| transglycosylase-associated protein [Burkholderia multivorans
          ATCC 17616]
 ref|YP_001945345.1| transglycosylase-associated protein [Burkholderia multivorans
          ATCC 17616]
 ref|ZP_03586583.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gb|ABX16070.1| Transglycosylase-associated protein [Burkholderia multivorans
          ATCC 17616]
 dbj|BAG42809.1| transglycosylase-associated protein [Burkholderia multivorans
          ATCC 17616]
 gb|EED98870.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
          Length = 83

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 60/83 (72%), Positives = 73/83 (87%)

Query: 1  MEHGLIAWLIIGAVAGWLAGVLVKGGGFGLLADILIGIVGAVIGGWLAGLLGIAVGGGIL 60
          M HGLI WLIIGA+AGWLAGVLVKGGGFGL+ DI++GIVGAVIGGWLAG+LGI+VG G +
Sbjct: 1  MTHGLIMWLIIGAIAGWLAGVLVKGGGFGLIVDIIVGIVGAVIGGWLAGVLGISVGSGFI 60

Query: 61 ASIVTATLGAIVLLVIVRAFRRA 83
           S++ A +GA++LL I+R FRRA
Sbjct: 61 GSVIIAVIGAVILLFIIRLFRRA 83