BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2704.p         (109 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001907883.1| hypothetical protein ETA_19540 [Erwinia tasm...    97   1e-18
ref|YP_003261609.1| hypothetical protein Pecwa_4299 [Pectobacter...    90   1e-16
gb|AAO34624.1| unknown [Erwinia chrysanthemi]                          87   6e-16
ref|ZP_08499682.1| hypothetical protein HMPREF9086_3946 [Enterob...    86   2e-15
ref|YP_050214.1| hypothetical protein ECA2119 [Pectobacterium at...    86   3e-15

>ref|YP_001907883.1| hypothetical protein ETA_19540 [Erwinia tasmaniensis Et1/99]
 emb|CAO97000.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
          Length = 106

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/102 (46%), Positives = 67/102 (65%), Gaps = 4/102 (3%)

Query: 6   LLTTAEDEIAAGSVFRVKAEWPYEEIVDFMLLYLPSESSTHALIVCTGMKAGRVLIKLPP 65
           LL   E  I  G VFR+ A WPYE+IVDFM++ L   + TH L+V +G KAG +L++LP 
Sbjct: 6   LLNYPEKSIRRGRVFRLPAVWPYEDIVDFMVIDL---AHTHGLVVSSGFKAGSMLVELPS 62

Query: 66  E-ADCGGRAISKDWLIRKWDEWVYPQCAIEDVLVARRYEVES 106
           E A   G A+S +W+I  W +W+YP+CA++DV +  +Y   S
Sbjct: 63  ESASSEGHALSTEWVINNWSKWIYPECAVKDVYIIDQYTATS 104


>ref|YP_003261609.1| hypothetical protein Pecwa_4299 [Pectobacterium wasabiae WPP163]
 gb|ACX90002.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163]
          Length = 110

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/99 (39%), Positives = 63/99 (63%), Gaps = 1/99 (1%)

Query: 6   LLTTAEDEIAAGSVFRVKAEWPYEEIVDFMLLYLPSESSTHALIVCTGMKAGRVLIKLPP 65
           L+      I+ G VFR  A WPYE  +D +++ +P E S ++L+V TG KAG +L++LP 
Sbjct: 5   LIEYKSKTISRGCVFRFPAIWPYESYIDLLVVDIPDEGSGYSLVVTTGHKAGLILVRLPN 64

Query: 66  EAD-CGGRAISKDWLIRKWDEWVYPQCAIEDVLVARRYE 103
           E +    R+IS  W++  W++W+YP C +ED+L+   Y+
Sbjct: 65  ECESVSNRSISYQWILDNWNKWIYPDCNLEDILIIEHYD 103


>gb|AAO34624.1| unknown [Erwinia chrysanthemi]
          Length = 110

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/89 (44%), Positives = 61/89 (68%), Gaps = 1/89 (1%)

Query: 17  GSVFRVKAEWPYEEIVDFMLLYLPSESSTHALIVCTGMKAGRVLIKLPPEADCGG-RAIS 75
           G++FR+ A WPYE +VDFM++ L +    + LIV +G KAG +L+KLP E      R +S
Sbjct: 18  GNIFRLPAVWPYEALVDFMVVDLSNADRPYGLIVSSGHKAGLILVKLPAECCLSEVRGLS 77

Query: 76  KDWLIRKWDEWVYPQCAIEDVLVARRYEV 104
            +W+I  W++W+YP+C ++DV V  RYE+
Sbjct: 78  VEWVIDNWEKWIYPECDVKDVYVIDRYEI 106


>ref|ZP_08499682.1| hypothetical protein HMPREF9086_3946 [Enterobacter hormaechei ATCC
           49162]
 gb|EGK57955.1| hypothetical protein HMPREF9086_3946 [Enterobacter hormaechei ATCC
           49162]
          Length = 103

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 4/98 (4%)

Query: 6   LLTTAEDEIAAGSVFRVKAEWPYEEIVDFMLLYLPSESSTHALIVCTGMKAGRVLIKLPP 65
           L+      I  G+VFR+ A WPYEE VDFM++ L     TH L+V +G KAG +LI LP 
Sbjct: 3   LIDYKNKSIKRGTVFRLPAVWPYEEWVDFMVIDL---FETHGLVVSSGHKAGLILISLPI 59

Query: 66  E-ADCGGRAISKDWLIRKWDEWVYPQCAIEDVLVARRY 102
           E A   GRA+S +W+I  W +W+YP C +E+V +   Y
Sbjct: 60  ESASTEGRALSTEWVITNWAKWIYPDCQVENVHILDEY 97


>ref|YP_050214.1| hypothetical protein ECA2119 [Pectobacterium atrosepticum SCRI1043]
 emb|CAG75021.1| hypothetical protein ECA2119 [Pectobacterium atrosepticum SCRI1043]
          Length = 110

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 2   NWQNLLTTAEDEIAAGSVFRVKAEWPYEEIVDFMLLYLPSESSTHALIVCTGMKAGRVLI 61
           N   L+      +  G+V R+  +WPYEE+VDFM+  +P    ++ L+V +G KAG +L+
Sbjct: 3   NAMKLVNYPSKALVHGTVLRLPGQWPYEELVDFMVFDMPGGDRSNGLMVSSGHKAGLILV 62

Query: 62  KLPPEADCGG-RAISKDWLIRKWDEWVYPQCAIEDVLVARRY 102
            LP +++    R +S  W+I  W++W+YP+C I DV V   Y
Sbjct: 63  LLPQDSELKEVRGLSTQWVIDNWEKWIYPECNINDVHVIGSY 104