BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2702.p         (110 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003539830.1| hypothetical protein EAM_2763 [Erwinia amylo...   104   5e-21
ref|YP_001907883.1| hypothetical protein ETA_19540 [Erwinia tasm...   102   1e-20
gb|AAO34624.1| unknown [Erwinia chrysanthemi]                         102   2e-20
ref|ZP_08499682.1| hypothetical protein HMPREF9086_3946 [Enterob...   101   3e-20
ref|YP_003261609.1| hypothetical protein Pecwa_4299 [Pectobacter...    97   8e-19

>ref|YP_003539830.1| hypothetical protein EAM_2763 [Erwinia amylovora ATCC 49946]
 emb|CBJ47437.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
          Length = 106

 Score =  104 bits (259), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/94 (47%), Positives = 66/94 (70%)

Query: 13  QYIMHGAIFRVKGVWPYEEFVDFMLVDMADDRTRHALVVSSGRKASLVLVRLPLDSGSPT 72
           ++I  G+ FR+  VWPYE+ VDFM+ +  DD   + L++SSG KA L LV+ P++S S  
Sbjct: 9   KFISRGSAFRLPAVWPYEKLVDFMVFETQDDERPYGLIISSGYKAGLCLVKFPMESISDE 68

Query: 73  GNTLSRKWLIENWGKWVYPQCSVQDVFFLPRYEA 106
           GN LS +W+I NW KW+YP+C+V+DV  + +Y A
Sbjct: 69  GNGLSTEWVINNWEKWIYPECNVEDVHIIEQYVA 102


>ref|YP_001907883.1| hypothetical protein ETA_19540 [Erwinia tasmaniensis Et1/99]
 emb|CAO97000.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
          Length = 106

 Score =  102 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 3/92 (3%)

Query: 15  IMHGAIFRVKGVWPYEEFVDFMLVDMADDRTRHALVVSSGRKASLVLVRLPLDSGSPTGN 74
           I  G +FR+  VWPYE+ VDFM++D+A     H LVVSSG KA  +LV LP +S S  G+
Sbjct: 14  IRRGRVFRLPAVWPYEDIVDFMVIDLAHT---HGLVVSSGFKAGSMLVELPSESASSEGH 70

Query: 75  TLSRKWLIENWGKWVYPQCSVQDVFFLPRYEA 106
            LS +W+I NW KW+YP+C+V+DV+ + +Y A
Sbjct: 71  ALSTEWVINNWSKWIYPECAVKDVYIIDQYTA 102


>gb|AAO34624.1| unknown [Erwinia chrysanthemi]
          Length = 110

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/96 (47%), Positives = 66/96 (68%)

Query: 15  IMHGAIFRVKGVWPYEEFVDFMLVDMADDRTRHALVVSSGRKASLVLVRLPLDSGSPTGN 74
           + HG IFR+  VWPYE  VDFM+VD+++    + L+VSSG KA L+LV+LP +       
Sbjct: 15  LRHGNIFRLPAVWPYEALVDFMVVDLSNADRPYGLIVSSGHKAGLILVKLPAECCLSEVR 74

Query: 75  TLSRKWLIENWGKWVYPQCSVQDVFFLPRYEAQDPE 110
            LS +W+I+NW KW+YP+C V+DV+ + RYE  D +
Sbjct: 75  GLSVEWVIDNWEKWIYPECDVKDVYVIDRYEILDSQ 110


>ref|ZP_08499682.1| hypothetical protein HMPREF9086_3946 [Enterobacter hormaechei ATCC
           49162]
 gb|EGK57955.1| hypothetical protein HMPREF9086_3946 [Enterobacter hormaechei ATCC
           49162]
          Length = 103

 Score =  101 bits (252), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)

Query: 15  IMHGAIFRVKGVWPYEEFVDFMLVDMADDRTRHALVVSSGRKASLVLVRLPLDSGSPTGN 74
           I  G +FR+  VWPYEE+VDFM++D+ +    H LVVSSG KA L+L+ LP++S S  G 
Sbjct: 11  IKRGTVFRLPAVWPYEEWVDFMVIDLFET---HGLVVSSGHKAGLILISLPIESASTEGR 67

Query: 75  TLSRKWLIENWGKWVYPQCSVQDVFFLPRYEA 106
            LS +W+I NW KW+YP C V++V  L  Y A
Sbjct: 68  ALSTEWVITNWAKWIYPDCQVENVHILDEYVA 99


>ref|YP_003261609.1| hypothetical protein Pecwa_4299 [Pectobacterium wasabiae WPP163]
 gb|ACX90002.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163]
          Length = 110

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 36/91 (39%), Positives = 65/91 (71%)

Query: 15  IMHGAIFRVKGVWPYEEFVDFMLVDMADDRTRHALVVSSGRKASLVLVRLPLDSGSPTGN 74
           I  G +FR   +WPYE ++D ++VD+ D+ + ++LVV++G KA L+LVRLP +  S +  
Sbjct: 13  ISRGCVFRFPAIWPYESYIDLLVVDIPDEGSGYSLVVTTGHKAGLILVRLPNECESVSNR 72

Query: 75  TLSRKWLIENWGKWVYPQCSVQDVFFLPRYE 105
           ++S +W+++NW KW+YP C+++D+  +  Y+
Sbjct: 73  SISYQWILDNWNKWIYPDCNLEDILIIEHYD 103