BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2694.p (583 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776641.1| hemolysin activation/secretion protein [Herb... 727 0.0 emb|CAQ36962.1| activation/secretion protein [Ralstonia solanace... 686 0.0 gb|AEG71561.1| hemolysin activator translocator [Ralstonia solan... 685 0.0 ref|YP_002257836.1| activation/secretion protein [Ralstonia sola... 685 0.0 ref|NP_522636.1| activation/secretion protein [Ralstonia solanac... 684 0.0 >ref|YP_003776641.1| hemolysin activation/secretion protein [Herbaspirillum seropedicae SmR1] gb|ADJ64733.1| hemolysin activation/secretion protein [Herbaspirillum seropedicae SmR1] Length = 584 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 378/584 (64%), Positives = 465/584 (79%), Gaps = 1/584 (0%) Query: 1 MKQDPQGVLRGPLRPRRLATALSFAFSLGQWGVAHELHAQTDPATQQYQREQQRERALRR 60 M QDPQG LR +R R + L L Q GV AQ D +TQQ+QR+Q+RER LRR Sbjct: 1 MSQDPQGSLRRHVRLRGRGSFLPIVLCLCQAGVMSSAWAQADLSTQQFQRQQERERELRR 60 Query: 61 QQETTPDVRLPAESAAPALPLPAQETPCYPIRRVELRGEEAARFDWLLG-DEASVDGRCL 119 QQE PDVRLPA+ A A +PAQE+PC+ + RV L G +ARFDWLL EA+ GRCL Sbjct: 61 QQERGPDVRLPAQPGAAAEAVPAQESPCFAVHRVVLDGPGSARFDWLLDLPEANPGGRCL 120 Query: 120 GVQGINALMTRLQNAIVARGYITTRVLAEPQDLNSGVLMLTLLPGRVRQIRFAADADPRG 179 GVQGINA+M+ LQNAIVARGY+TTR+LA+PQD+ SG L LT++PG++R IRFA +ADPR Sbjct: 121 GVQGINAVMSALQNAIVARGYVTTRILAQPQDIASGELRLTIVPGKIRAIRFADNADPRA 180 Query: 180 TQWNALPVRPGELLNLRDIEQGLENLKRVPTAEADIKLEPAQGEGALPGQSDLVISYRQA 239 TQWNALP PG+LLNLRDIEQGLENLKRVPTAEAD+++ P++G+ A PG SDLVISY+Q Sbjct: 181 TQWNALPASPGDLLNLRDIEQGLENLKRVPTAEADVQIAPSEGKDAAPGDSDLVISYQQG 240 Query: 240 FPLRLAVSVDDSGSDATGKYQGSITLSYDNWWTLNDLFYVSVNHDLGGGNAGPRGSRGST 299 P+RL +SVDDSG+ ATGKYQGS T+S DNW TLNDLFY+S +HDLGGG+ G RGS+ Sbjct: 241 IPIRLTLSVDDSGTKATGKYQGSATVSLDNWLTLNDLFYISFSHDLGGGDPGARGSQSQV 300 Query: 300 VHYSLPFGYWNLGFTTSSSDYHQTIAGLTQTYLYRGQSETSEIKLARMVYRDASRKTSVS 359 VHYSLP GYW L FT SS+ YHQ +AG+ QTYLY GQSET+E+KL+R+VYRDA RKT++S Sbjct: 301 VHYSLPLGYWALAFTNSSNRYHQAVAGINQTYLYSGQSETNELKLSRLVYRDAVRKTTLS 360 Query: 360 AKAFLRRASNFVNDTEIEVQRRRTAGWELGVGHREFIADGALDLSLAYRRGTGAFSALPA 419 K F+R +SN+V+DTE++VQRRR AGWE+G+ HREFI +G LDL+LAY+RGTGAF A+ A Sbjct: 361 FKGFVRSSSNYVDDTEVQVQRRRVAGWEMGLAHREFIGEGTLDLALAYKRGTGAFDAMAA 420 Query: 420 PEDVFGEGSARFSLATLDLNLSQPFSLDAPWGRQALRYTLAARGQWNGTALAPQERFSIG 479 PE+ FGEG++RF L T DLNL+ PF+L PWG+QA+RYTL AR QWN T L PQ++FS+G Sbjct: 421 PEEAFGEGTSRFRLMTADLNLNAPFALPMPWGKQAMRYTLGARAQWNRTPLTPQDKFSLG 480 Query: 480 GRYTVRGFDGEMTLLADHGWFVRNELAAALGSSGQEFFIGLDYGEVAGPSAQLLVGKHLA 539 GRY+VRGFDGE LLA+ GW+VRNELAAALG+S QE + GLDYGEV GPS +LLVG+ LA Sbjct: 481 GRYSVRGFDGESNLLAERGWYVRNELAAALGASKQEIYAGLDYGEVGGPSTELLVGRRLA 540 Query: 540 GAVAGLRGGYKSLSWEAFAGTPVSKPEGFETARLTAGFTLNWSY 583 GAV GLRG ++E FAG P+S+P+ F+T+ LTAG +L WS+ Sbjct: 541 GAVLGLRGALGRTNYEVFAGVPISQPDRFKTSPLTAGMSLMWSF 584 >emb|CAQ36962.1| activation/secretion protein [Ralstonia solanacearum MolK2] Length = 562 Score = 686 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 342/552 (61%), Positives = 418/552 (75%), Gaps = 11/552 (1%) Query: 39 AQTDPA---TQQYQREQQRERALRRQQETTPDVRLPAESAAPALPLPAQETPCYPIRRVE 95 AQT PA Q+ R+Q+RE LR+QQE PDVRL A LPA E+PC+ I R+ Sbjct: 15 AQTAPAGEAAQELLRQQERECLLRQQQEPKPDVRLERGGAVETDRLPANESPCFRIDRIT 74 Query: 96 LRGEEAARFDWLLGDEASVD----GRCLGVQGINALMTRLQNAIVARGYITTRVLAEPQD 151 L G+ AARF W L D GRCLG GIN +M R+QNAIVARGY+TTRVLA PQD Sbjct: 75 LTGDAAARFQWALSAADPSDDPATGRCLGAAGINLVMKRVQNAIVARGYVTTRVLAAPQD 134 Query: 152 LNSGVLMLTLLPGRVRQIRFAADADPRGTQWNALPVRPGELLNLRDIEQGLENLKRVPTA 211 L G L LTL+PGR+R IRF+ D+ PR T+WNALP PG++LNLRDIEQGLEN KRVPTA Sbjct: 135 LKQGTLGLTLVPGRIRAIRFSEDSSPRATKWNALPAAPGDILNLRDIEQGLENFKRVPTA 194 Query: 212 EADIKLEPAQGEGALPGQSDLVISYRQAFPLRLAVSVDDSGSDATGKYQGSITLSYDNWW 271 +ADI++ PA+G A PG+SDLVI ++Q P RL V+ DDSGS TGKYQGS+T+SYD+WW Sbjct: 195 DADIQIAPAEGPDAAPGESDLVIVWKQGLPFRLNVAADDSGSKYTGKYQGSVTVSYDHWW 254 Query: 272 TLNDLFYVSVNHDLGGGNAGPRGSRGSTVHYSLPFGYWNLGFTTSSSDYHQTIAGLTQTY 331 TLNDLFY S NHDLGGG +G +G+RG TVHY +P+ YW LGFTTSS DY+Q++ G QTY Sbjct: 255 TLNDLFYASFNHDLGGGYSGSKGTRGYTVHYEVPYDYWLLGFTTSSYDYYQSVVGANQTY 314 Query: 332 LYRGQSETSEIKLARMVYRDASRKTSVSAKAFLRRASNFVNDTEIEVQRRRTAGWELGVG 391 +Y G SE SE++L+R+ YRDA RKTS + ++R ++NF++DTEIEVQRRRTAGWE+G+ Sbjct: 315 IYSGTSENSEVRLSRLFYRDAVRKTSAYVRGWVRSSANFIDDTEIEVQRRRTAGWEIGLN 374 Query: 392 HREFIADGALDLSLAYRRGTGAFSALPAPEDVFGEGSARFSLATLDLNLSQPFSLDAPWG 451 HREFI LD ++AYR+GTG S+LPAPE+ F EG++R SL T+D L+ PF++ Sbjct: 375 HREFIGAATLDANVAYRKGTGMLSSLPAPEEAFEEGTSRPSLITVDAQLTVPFAV----A 430 Query: 452 RQALRYTLAARGQWNGTALAPQERFSIGGRYTVRGFDGEMTLLADHGWFVRNELAAALGS 511 Q LRYT A RGQWN T L PQ+RFSIGGRYTVRGFDGE TL+ D GW VRN+L ALG+ Sbjct: 431 SQRLRYTTAWRGQWNRTPLVPQDRFSIGGRYTVRGFDGENTLIGDRGWLVRNDLGWALGN 490 Query: 512 SGQEFFIGLDYGEVAGPSAQLLVGKHLAGAVAGLRGGYKSLSWEAFAGTPVSKPEGFETA 571 SGQE ++G+DYGEV G S +LL+G+HLAGAV GLRGGYK L W+ F GTP+SKPEGF TA Sbjct: 491 SGQELYVGVDYGEVGGQSTRLLIGQHLAGAVLGLRGGYKGLFWDVFVGTPISKPEGFRTA 550 Query: 572 RLTAGFTLNWSY 583 TAGF ++WSY Sbjct: 551 HTTAGFNVSWSY 562 >gb|AEG71561.1| hemolysin activator translocator [Ralstonia solanacearum Po82] Length = 578 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 343/552 (62%), Positives = 418/552 (75%), Gaps = 11/552 (1%) Query: 39 AQTDPA---TQQYQREQQRERALRRQQETTPDVRLPAESAAPALPLPAQETPCYPIRRVE 95 AQT PA Q+ R+Q+RER LR+QQE PDVRL A LPA E+PC+ I R+ Sbjct: 31 AQTAPAGEAAQELLRQQERERLLRQQQEPKPDVRLERGGAVETDRLPANESPCFRIDRIT 90 Query: 96 LRGEEAARFDWLLGDEASVD----GRCLGVQGINALMTRLQNAIVARGYITTRVLAEPQD 151 L G+ AARF W L D GRCLG GIN +M R+QNAIVARGY+TTRVLA PQD Sbjct: 91 LTGDAAARFQWALSAADPADDPATGRCLGAAGINLVMKRVQNAIVARGYVTTRVLAAPQD 150 Query: 152 LNSGVLMLTLLPGRVRQIRFAADADPRGTQWNALPVRPGELLNLRDIEQGLENLKRVPTA 211 L G L LTL+PGR+R IRF+ D+ PR T+WNALP PG++LNLRDIEQGLEN KRVPTA Sbjct: 151 LKQGTLGLTLVPGRIRAIRFSEDSSPRATKWNALPAAPGDILNLRDIEQGLENFKRVPTA 210 Query: 212 EADIKLEPAQGEGALPGQSDLVISYRQAFPLRLAVSVDDSGSDATGKYQGSITLSYDNWW 271 +ADI++ PA+G A PG+SDLVI ++Q P RL V+ DDSGS TGKYQGS+T+SYD+WW Sbjct: 211 DADIQIAPAEGPDAAPGESDLVIVWKQGLPFRLNVAADDSGSKYTGKYQGSVTVSYDHWW 270 Query: 272 TLNDLFYVSVNHDLGGGNAGPRGSRGSTVHYSLPFGYWNLGFTTSSSDYHQTIAGLTQTY 331 TLNDLFY S NHDLGGG +G +G+RG TVHY +P+ YW LGFTTSS DY+Q++ G QTY Sbjct: 271 TLNDLFYASFNHDLGGGYSGSKGTRGYTVHYEVPYDYWLLGFTTSSYDYYQSVVGANQTY 330 Query: 332 LYRGQSETSEIKLARMVYRDASRKTSVSAKAFLRRASNFVNDTEIEVQRRRTAGWELGVG 391 +Y G SE SE++L+R+ YRDA RKTS + ++R ++NF++DTEIEVQRRRTAGWE+G+ Sbjct: 331 IYSGTSENSEVRLSRLFYRDAVRKTSAYVRGWVRSSANFIDDTEIEVQRRRTAGWEIGLN 390 Query: 392 HREFIADGALDLSLAYRRGTGAFSALPAPEDVFGEGSARFSLATLDLNLSQPFSLDAPWG 451 HREFI LD ++AYR+GTG S+LPAPE+ F EG++R SL TLD LS PF++ Sbjct: 391 HREFIGAATLDANVAYRKGTGMLSSLPAPEEAFEEGTSRPSLITLDAQLSVPFAV----A 446 Query: 452 RQALRYTLAARGQWNGTALAPQERFSIGGRYTVRGFDGEMTLLADHGWFVRNELAAALGS 511 Q LRYT A RGQWN T L PQ+RFSIGGRYTVRGFDGE TL+ D GW VRN+L ALG+ Sbjct: 447 SQRLRYTTAWRGQWNRTPLVPQDRFSIGGRYTVRGFDGENTLIGDRGWLVRNDLGWALGN 506 Query: 512 SGQEFFIGLDYGEVAGPSAQLLVGKHLAGAVAGLRGGYKSLSWEAFAGTPVSKPEGFETA 571 SGQE ++G+DYGEV G S +LL+G+HLAG V GLRGGYK L W+ F GTP+SKPEGF T+ Sbjct: 507 SGQELYVGVDYGEVGGQSTRLLIGQHLAGGVLGLRGGYKGLFWDVFIGTPLSKPEGFRTS 566 Query: 572 RLTAGFTLNWSY 583 TAGF ++WSY Sbjct: 567 HTTAGFNVSWSY 578 >ref|YP_002257836.1| activation/secretion protein [Ralstonia solanacearum IPO1609] emb|CAQ59725.1| activation/secretion protein [Ralstonia solanacearum IPO1609] Length = 562 Score = 685 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 342/552 (61%), Positives = 419/552 (75%), Gaps = 11/552 (1%) Query: 39 AQTDPA---TQQYQREQQRERALRRQQETTPDVRLPAESAAPALPLPAQETPCYPIRRVE 95 AQT PA Q+ R+Q+RER LR+QQE PDVRL A LPA E+PC+ I R+ Sbjct: 15 AQTAPAGEAAQELLRQQERERLLRQQQEPKPDVRLERGGAVETDRLPANESPCFRIDRIT 74 Query: 96 LRGEEAARFDWLLGDEASVD----GRCLGVQGINALMTRLQNAIVARGYITTRVLAEPQD 151 L G+ AARF W L D GRCLG GIN +M R+QNAIVARGY+TTRVLA PQD Sbjct: 75 LTGDAAARFQWALSAADPSDDPATGRCLGAAGINRVMKRVQNAIVARGYVTTRVLAAPQD 134 Query: 152 LNSGVLMLTLLPGRVRQIRFAADADPRGTQWNALPVRPGELLNLRDIEQGLENLKRVPTA 211 L G L LTL+PGR+R IRF+ D+ PR T+WNALP PG++LNLRDIEQGLEN KRVPTA Sbjct: 135 LKQGTLGLTLVPGRIRAIRFSEDSSPRATKWNALPAAPGDILNLRDIEQGLENFKRVPTA 194 Query: 212 EADIKLEPAQGEGALPGQSDLVISYRQAFPLRLAVSVDDSGSDATGKYQGSITLSYDNWW 271 +ADI++ PA+G A PG+SDLVI ++Q P RL V+ DDSGS TGKYQGS+T+SYD+WW Sbjct: 195 DADIQIAPAEGPDAAPGESDLVIVWKQGLPFRLNVAADDSGSKYTGKYQGSVTVSYDHWW 254 Query: 272 TLNDLFYVSVNHDLGGGNAGPRGSRGSTVHYSLPFGYWNLGFTTSSSDYHQTIAGLTQTY 331 TLNDLFY S NHDLGGG +G +G+RG TVHY +P+ YW LGFTTSS DY+Q++ G QTY Sbjct: 255 TLNDLFYASFNHDLGGGYSGSKGTRGYTVHYEVPYDYWLLGFTTSSYDYYQSVVGANQTY 314 Query: 332 LYRGQSETSEIKLARMVYRDASRKTSVSAKAFLRRASNFVNDTEIEVQRRRTAGWELGVG 391 +Y G SE SE++L+R+ YRDA RKTS + ++R ++NF++DTEIEVQRRRTAGWE+G+ Sbjct: 315 IYSGTSENSEVRLSRLFYRDAVRKTSAYVRGWVRSSANFIDDTEIEVQRRRTAGWEIGLN 374 Query: 392 HREFIADGALDLSLAYRRGTGAFSALPAPEDVFGEGSARFSLATLDLNLSQPFSLDAPWG 451 HREFI LD ++AYR+GTG S+LPAPE+ F EG++R SL T+D L+ PF++ Sbjct: 375 HREFIGAATLDANVAYRKGTGMLSSLPAPEEAFEEGTSRPSLITVDAQLTVPFAV----A 430 Query: 452 RQALRYTLAARGQWNGTALAPQERFSIGGRYTVRGFDGEMTLLADHGWFVRNELAAALGS 511 Q LRYT A RGQWN T L PQ+RFSIGGRYTVRGFDGE TL+ D GW VRN+L ALG+ Sbjct: 431 SQRLRYTTAWRGQWNRTPLVPQDRFSIGGRYTVRGFDGENTLIGDRGWLVRNDLGWALGN 490 Query: 512 SGQEFFIGLDYGEVAGPSAQLLVGKHLAGAVAGLRGGYKSLSWEAFAGTPVSKPEGFETA 571 SGQE ++G+DYGEV G S +LL+G+HLAGAV GLRGGYK L W+ F GTP+SKPEGF T+ Sbjct: 491 SGQELYVGVDYGEVGGQSTRLLIGQHLAGAVLGLRGGYKGLFWDVFVGTPLSKPEGFRTS 550 Query: 572 RLTAGFTLNWSY 583 TAGF ++WSY Sbjct: 551 HTTAGFNVSWSY 562 >ref|NP_522636.1| activation/secretion protein [Ralstonia solanacearum GMI1000] emb|CAD18226.1| probable activation/secretion protein [Ralstonia solanacearum GMI1000] Length = 578 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 340/549 (61%), Positives = 419/549 (76%), Gaps = 8/549 (1%) Query: 39 AQTDPATQQYQREQQRERALRRQQETTPDVRLPAESAAPALPLPAQETPCYPIRRVELRG 98 A + ATQ+ R+Q+RERALR++QE+ PDVRL AA LPA E+PC+ I R+ L G Sbjct: 34 APAEDATQELLRQQERERALRQRQESKPDVRLERGVAAETGRLPADESPCFRIDRITLTG 93 Query: 99 EEAARFDWLLGDEASVD----GRCLGVQGINALMTRLQNAIVARGYITTRVLAEPQDLNS 154 + A RF W L D GRCLG GIN +M R+QNAIVARGY+TTRVLA PQDL Sbjct: 94 DAAERFQWALPAADPSDDPATGRCLGTAGINLVMKRVQNAIVARGYVTTRVLAAPQDLKQ 153 Query: 155 GVLMLTLLPGRVRQIRFAADADPRGTQWNALPVRPGELLNLRDIEQGLENLKRVPTAEAD 214 G L LTL+PGR+R IRF+ D+ PR T+WNALP PG++LNLRDIEQGLEN KRVPTA+AD Sbjct: 154 GTLALTLVPGRIRAIRFSDDSSPRATRWNALPAAPGDILNLRDIEQGLENFKRVPTADAD 213 Query: 215 IKLEPAQGEGALPGQSDLVISYRQAFPLRLAVSVDDSGSDATGKYQGSITLSYDNWWTLN 274 I++ PA G GA PG+SDLVI+++Q P RL V+ DDSGS TGKYQGS+T+SYD+WWTLN Sbjct: 214 IQIAPADGPGATPGESDLVIAWKQGLPFRLNVAADDSGSKYTGKYQGSVTVSYDHWWTLN 273 Query: 275 DLFYVSVNHDLGGGNAGPRGSRGSTVHYSLPFGYWNLGFTTSSSDYHQTIAGLTQTYLYR 334 DLFY S NHDLGGG +G +G+RG TVHY +P+ YW LGFTTSS DY+Q++ G QTY+Y Sbjct: 274 DLFYASFNHDLGGGYSGSKGTRGYTVHYEVPYDYWLLGFTTSSYDYYQSVVGANQTYIYS 333 Query: 335 GQSETSEIKLARMVYRDASRKTSVSAKAFLRRASNFVNDTEIEVQRRRTAGWELGVGHRE 394 G SE SE++L+R+ YRDA RKTS + ++R ++NF++DTE+EVQRRR AGWE+G+ HRE Sbjct: 334 GTSENSEVRLSRLFYRDAVRKTSAYVRGWVRSSANFIDDTEVEVQRRRMAGWEIGLNHRE 393 Query: 395 FIADGALDLSLAYRRGTGAFSALPAPEDVFGEGSARFSLATLDLNLSQPFSLDAPWGRQA 454 FI LD ++AYR+GTG S+LPAPE+ F EG+AR SL T D L+ PF++ Q Sbjct: 394 FIGAATLDANVAYRKGTGMLSSLPAPEESFDEGTARPSLITADAQLTVPFAV----ASQR 449 Query: 455 LRYTLAARGQWNGTALAPQERFSIGGRYTVRGFDGEMTLLADHGWFVRNELAAALGSSGQ 514 LRYT A RGQWN T L PQ+RFSIGGRYTVRGFDGE TL+ D GW VRN+L LG+SGQ Sbjct: 450 LRYTTAWRGQWNRTPLVPQDRFSIGGRYTVRGFDGENTLIGDRGWLVRNDLGWTLGNSGQ 509 Query: 515 EFFIGLDYGEVAGPSAQLLVGKHLAGAVAGLRGGYKSLSWEAFAGTPVSKPEGFETARLT 574 E ++G+DYGEV G SA++L+G+HLAGAV GLRGGYK L W+ F GTP+SKPEGF TA T Sbjct: 510 ELYVGVDYGEVGGQSARVLIGQHLAGAVLGLRGGYKGLFWDVFIGTPLSKPEGFRTAHTT 569 Query: 575 AGFTLNWSY 583 AGF ++WSY Sbjct: 570 AGFNVSWSY 578