BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2691.p (197 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774435.1| cupin superfamily protein [Herbaspirillum se... 310 6e-83 ref|ZP_03570617.1| cupin 2, conserved barrel domain protein [Bur... 290 1e-76 ref|YP_001811491.1| cupin 2 domain-containing protein [Burkholde... 289 1e-76 ref|ZP_03585435.1| cupin 2, conserved barrel domain protein [Bur... 287 6e-76 ref|ZP_03267420.1| Cupin 2 conserved barrel domain protein [Burk... 280 8e-74 >ref|YP_003774435.1| cupin superfamily protein [Herbaspirillum seropedicae SmR1] gb|ADJ62527.1| Cupin_2 family protein [Herbaspirillum seropedicae SmR1] Length = 196 Score = 310 bits (795), Expect = 6e-83, Method: Composition-based stats. Identities = 160/194 (82%), Positives = 175/194 (90%), Gaps = 3/194 (1%) Query: 5 MSFPPIHRVVTGHDAQGRSIISSDGPLPTVVEVAAIPGTLFHEVWST---SATPARVDNG 61 MSFPPIHRVVTGHDAQGRSI+SS+GPLPTVVE+AAIPGT+FHEVWST TP +VDNG Sbjct: 1 MSFPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNG 60 Query: 62 LDPSLGALVLSPPERGTRMRFVDIPPDTEEFLASANSKMHEAFSQIGEASASTVQTDSPH 121 DP++GALVLSPP GTRMRFVDIPPDT+EFLA + KM +AF+QIGEA ASTVQ DSPH Sbjct: 61 ADPTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPH 120 Query: 122 PLMHRTESVDYGIVIEGEMTLVLDRGEVALKPGSVVVQRGTNHAWANRSGKPCRMLFILV 181 PLMHRTESVDYG+VIEGEMTLVLD+GEVALKPGSVVVQRGTNHAWANRSG+PCRMLFILV Sbjct: 121 PLMHRTESVDYGVVIEGEMTLVLDQGEVALKPGSVVVQRGTNHAWANRSGRPCRMLFILV 180 Query: 182 DGEYDPAIAAQLAK 195 DG Y+ IAAQL K Sbjct: 181 DGRYEADIAAQLRK 194 >ref|ZP_03570617.1| cupin 2, conserved barrel domain protein [Burkholderia multivorans CGD2M] ref|ZP_03577262.1| cupin 2, conserved barrel domain protein [Burkholderia multivorans CGD2] gb|EEE08839.1| cupin 2, conserved barrel domain protein [Burkholderia multivorans CGD2] gb|EEE16524.1| cupin 2, conserved barrel domain protein [Burkholderia multivorans CGD2M] Length = 198 Score = 290 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 146/189 (77%), Positives = 170/189 (89%) Query: 5 MSFPPIHRVVTGHDAQGRSIISSDGPLPTVVEVAAIPGTLFHEVWSTSATPARVDNGLDP 64 MSFP I RVVTGHD GR++++SDGPLPTVVE+AAIPGT+FHEVWSTS++PA VDNG DP Sbjct: 1 MSFPAIRRVVTGHDTDGRAVVASDGPLPTVVEIAAIPGTVFHEVWSTSSSPATVDNGADP 60 Query: 65 SLGALVLSPPERGTRMRFVDIPPDTEEFLASANSKMHEAFSQIGEASASTVQTDSPHPLM 124 ++GAL+L PP +GTRMRFVDIPPDT EFLA +KMH+AFS+IG+A+ASTVQ SPHPLM Sbjct: 61 TVGALMLPPPRQGTRMRFVDIPPDTPEFLAHGATKMHDAFSEIGDAAASTVQAGSPHPLM 120 Query: 125 HRTESVDYGIVIEGEMTLVLDRGEVALKPGSVVVQRGTNHAWANRSGKPCRMLFILVDGE 184 HRTESVDYG+VIEGEMTL+LD EVAL PGSVV+QRGTNHAWANRSG+PCRMLF+L+DG Sbjct: 121 HRTESVDYGVVIEGEMTLILDDAEVALAPGSVVIQRGTNHAWANRSGRPCRMLFVLIDGV 180 Query: 185 YDPAIAAQL 193 YDPA+AA L Sbjct: 181 YDPALAAVL 189 >ref|YP_001811491.1| cupin 2 domain-containing protein [Burkholderia ambifaria MC40-6] gb|ACB67275.1| Cupin 2 conserved barrel domain protein [Burkholderia ambifaria MC40-6] Length = 198 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 145/189 (76%), Positives = 169/189 (89%) Query: 5 MSFPPIHRVVTGHDAQGRSIISSDGPLPTVVEVAAIPGTLFHEVWSTSATPARVDNGLDP 64 MSFP I RVVTGHD+ GR++++SDGPLPTVVE+AAIPGT+FHEVWSTS++PA VDNG DP Sbjct: 1 MSFPAIRRVVTGHDSDGRAVVASDGPLPTVVEIAAIPGTVFHEVWSTSSSPAMVDNGADP 60 Query: 65 SLGALVLSPPERGTRMRFVDIPPDTEEFLASANSKMHEAFSQIGEASASTVQTDSPHPLM 124 ++G L+L PP +GTRMRFVDIPPDT EFLA KMH+AFSQIG+A+ASTV+ SPHPLM Sbjct: 61 TVGVLMLPPPTQGTRMRFVDIPPDTPEFLAHGARKMHDAFSQIGDAAASTVKAGSPHPLM 120 Query: 125 HRTESVDYGIVIEGEMTLVLDRGEVALKPGSVVVQRGTNHAWANRSGKPCRMLFILVDGE 184 HRTES+DYG+VIEGEMTL+LD EVAL PGSVV+QRGTNHAWANRSG+PCRMLF+LVDG Sbjct: 121 HRTESIDYGVVIEGEMTLILDDAEVALAPGSVVIQRGTNHAWANRSGRPCRMLFVLVDGA 180 Query: 185 YDPAIAAQL 193 YDPA+AA L Sbjct: 181 YDPAVAAML 189 >ref|ZP_03585435.1| cupin 2, conserved barrel domain protein [Burkholderia multivorans CGD1] gb|EEE00027.1| cupin 2, conserved barrel domain protein [Burkholderia multivorans CGD1] Length = 198 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 142/189 (75%), Positives = 164/189 (86%) Query: 5 MSFPPIHRVVTGHDAQGRSIISSDGPLPTVVEVAAIPGTLFHEVWSTSATPARVDNGLDP 64 MSFP IHR+VTGHDA+GR++ISS GPLPTVVE+AAIPGT+FHEVWSTS P +DNG DP Sbjct: 1 MSFPAIHRIVTGHDAEGRAVISSQGPLPTVVEIAAIPGTVFHEVWSTSGNPVSIDNGADP 60 Query: 65 SLGALVLSPPERGTRMRFVDIPPDTEEFLASANSKMHEAFSQIGEASASTVQTDSPHPLM 124 ++GAL L PP +GTR RFVDIP DT EFLA ++M EAF+Q+G+A ASTV+ DSPHPLM Sbjct: 61 TVGALTLPPPPQGTRFRFVDIPSDTSEFLARGATRMQEAFTQVGDAHASTVRADSPHPLM 120 Query: 125 HRTESVDYGIVIEGEMTLVLDRGEVALKPGSVVVQRGTNHAWANRSGKPCRMLFILVDGE 184 HRTES+DYG+VIEGEMTLVLD EVAL PGSVV+QRGTNHAWANRSG+PCRMLF+L+DG Sbjct: 121 HRTESIDYGVVIEGEMTLVLDDSEVALAPGSVVIQRGTNHAWANRSGRPCRMLFVLIDGV 180 Query: 185 YDPAIAAQL 193 YDPAIA L Sbjct: 181 YDPAIADAL 189 >ref|ZP_03267420.1| Cupin 2 conserved barrel domain protein [Burkholderia sp. H160] gb|EEA01002.1| Cupin 2 conserved barrel domain protein [Burkholderia sp. H160] Length = 198 Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats. Identities = 141/189 (74%), Positives = 166/189 (87%) Query: 5 MSFPPIHRVVTGHDAQGRSIISSDGPLPTVVEVAAIPGTLFHEVWSTSATPARVDNGLDP 64 MSFP I RVVTGHD G++++ SDG LP V ++AAIPGT+FHEVWSTSATPA +DNG DP Sbjct: 1 MSFPAIRRVVTGHDPNGQAVVVSDGALPNVAQIAAIPGTVFHEVWSTSATPAPLDNGADP 60 Query: 65 SLGALVLSPPERGTRMRFVDIPPDTEEFLASANSKMHEAFSQIGEASASTVQTDSPHPLM 124 ++GAL+L PP+ GTRMRFVDIPPDT EFLA +++H+AFSQIG+A+ASTV+TDSPHPLM Sbjct: 61 TVGALMLPPPKHGTRMRFVDIPPDTAEFLAHGATRVHDAFSQIGDAAASTVRTDSPHPLM 120 Query: 125 HRTESVDYGIVIEGEMTLVLDRGEVALKPGSVVVQRGTNHAWANRSGKPCRMLFILVDGE 184 HRTES+DYG+VIEGEMTLVLD EVAL PGSVV+QRGTNHAWANRSG+PCRMLF+L+DG Sbjct: 121 HRTESIDYGVVIEGEMTLVLDAAEVALAPGSVVIQRGTNHAWANRSGRPCRMLFVLIDGA 180 Query: 185 YDPAIAAQL 193 Y P IAA L Sbjct: 181 YAPEIAAAL 189