BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2690.p         (271 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774434.1| cyclase [Herbaspirillum seropedicae SmR1] >g...   542   e-152
ref|ZP_03544237.1| cyclase family protein [Comamonas testosteron...   500   e-140
ref|ZP_03585434.1| polyketide cyclase [Burkholderia multivorans ...   489   e-136
ref|YP_001811492.1| cyclase family protein [Burkholderia ambifar...   489   e-136
ref|ZP_03570618.1| polyketide cyclase [Burkholderia multivorans ...   489   e-136

>ref|YP_003774434.1| cyclase [Herbaspirillum seropedicae SmR1]
 gb|ADJ62526.1| cyclase protein [Herbaspirillum seropedicae SmR1]
          Length = 271

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 261/269 (97%), Positives = 265/269 (98%)

Query: 1   MTASLQTRRRHRFVDLSIYLENDVLSDPPPLAPKITYQKHADTLPEFMAMLPGTLPEDYP 60
           MTASLQ RRRHRFVDLSIYLENDVLSDPPPLAPKITYQ+HADTLPEFMAMLPGT PEDYP
Sbjct: 1   MTASLQARRRHRFVDLSIYLENDVLSDPPPLAPKITYQQHADTLPEFMAMLPGTRPEDYP 60

Query: 61  DGEAAAAEWVTLTTHNGTHLDAPWHFHSTQDAKNGGARPSITIDEVPLEWCFQAGVKLDF 120
           DGEAAAAEWVTLTTHNGTHLDAPWHFHSTQDAKNGGARPSITIDEVPLEWCFQ GVKLDF
Sbjct: 61  DGEAAAAEWVTLTTHNGTHLDAPWHFHSTQDAKNGGARPSITIDEVPLEWCFQPGVKLDF 120

Query: 121 RHFPDGYVATAADVEAELKRIGHVLQPLDIVVVNTRAGSRYGHRDYLGAGCGMGYEATMY 180
           RHFPDGYVATAADVEAELKRIGHVL+PLDIVVVNTRAGSRYGHRDYLGAGCGMGYEATMY
Sbjct: 121 RHFPDGYVATAADVEAELKRIGHVLEPLDIVVVNTRAGSRYGHRDYLGAGCGMGYEATMY 180

Query: 181 LLERGVRLTGTDAWSWDAPFSYTAQRVAETGDKSLIWEGHKAGRDIGYCHLEKLHNLEAL 240
           LLERGVRLTGTDAWSWDAPFSYTAQRVAETG+K+LIWEGHKAGRDIGYCHLEKLHNLEAL
Sbjct: 181 LLERGVRLTGTDAWSWDAPFSYTAQRVAETGNKALIWEGHKAGRDIGYCHLEKLHNLEAL 240

Query: 241 PAHGFTISCFPHKIRGASAGWTRAVAIFD 269
           PAHGF ISCFPHKIRGASAGWTRAVAIFD
Sbjct: 241 PAHGFMISCFPHKIRGASAGWTRAVAIFD 269


>ref|ZP_03544237.1| cyclase family protein [Comamonas testosteroni KF-1]
 gb|EED68523.1| cyclase family protein [Comamonas testosteroni KF-1]
          Length = 270

 Score =  500 bits (1288), Expect = e-140,   Method: Composition-based stats.
 Identities = 239/261 (91%), Positives = 250/261 (95%)

Query: 10  RHRFVDLSIYLENDVLSDPPPLAPKITYQKHADTLPEFMAMLPGTLPEDYPDGEAAAAEW 69
           R RFVDLSIYLENDVLSDPPPLAPKITYQKH DTLPEFMAM+PGT PEDYPDGEAAAAEW
Sbjct: 5   RRRFVDLSIYLENDVLSDPPPLAPKITYQKHQDTLPEFMAMIPGTTPEDYPDGEAAAAEW 64

Query: 70  VTLTTHNGTHLDAPWHFHSTQDAKNGGARPSITIDEVPLEWCFQAGVKLDFRHFPDGYVA 129
           VTLTTH+GTHLDAPWHFHSTQDAK GG+RPSITIDEVPLEWCFQ GVKLDFR+FPDGYVA
Sbjct: 65  VTLTTHSGTHLDAPWHFHSTQDAKLGGSRPSITIDEVPLEWCFQPGVKLDFRYFPDGYVA 124

Query: 130 TAADVEAELKRIGHVLQPLDIVVVNTRAGSRYGHRDYLGAGCGMGYEATMYLLERGVRLT 189
           TAADVEAELKRIGH +QPLDIVVVNTRAGSRYG+ DYLGAGCGMGYEATMYLLERGVRLT
Sbjct: 125 TAADVEAELKRIGHEIQPLDIVVVNTRAGSRYGNADYLGAGCGMGYEATMYLLERGVRLT 184

Query: 190 GTDAWSWDAPFSYTAQRVAETGDKSLIWEGHKAGRDIGYCHLEKLHNLEALPAHGFTISC 249
           GTDAWSWDAPFSYTA +VAETG+K+LIWEGHKAGRDIGYCHLEKLHNLEALP  GF ISC
Sbjct: 185 GTDAWSWDAPFSYTAAKVAETGNKALIWEGHKAGRDIGYCHLEKLHNLEALPPTGFLISC 244

Query: 250 FPHKIRGASAGWTRAVAIFDE 270
           FPHKIRGASAGWTRAVAIF++
Sbjct: 245 FPHKIRGASAGWTRAVAIFED 265


>ref|ZP_03585434.1| polyketide cyclase [Burkholderia multivorans CGD1]
 gb|EEE00026.1| polyketide cyclase [Burkholderia multivorans CGD1]
          Length = 269

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 234/258 (90%), Positives = 242/258 (93%)

Query: 12  RFVDLSIYLENDVLSDPPPLAPKITYQKHADTLPEFMAMLPGTLPEDYPDGEAAAAEWVT 71
           RFVDLSIYLENDVLSDPPPLAP+I YQKH DTLPEFMAMLPGT PEDYPDGEAAAAEWVT
Sbjct: 6   RFVDLSIYLENDVLSDPPPLAPRIRYQKHGDTLPEFMAMLPGTKPEDYPDGEAAAAEWVT 65

Query: 72  LTTHNGTHLDAPWHFHSTQDAKNGGARPSITIDEVPLEWCFQAGVKLDFRHFPDGYVATA 131
           LTTH+GTHLDAPWHFHST DA  G ARPSITIDEVPLEWCFQ GVKLDFRHFPDGYVATA
Sbjct: 66  LTTHSGTHLDAPWHFHSTMDASLGEARPSITIDEVPLEWCFQPGVKLDFRHFPDGYVATA 125

Query: 132 ADVEAELKRIGHVLQPLDIVVVNTRAGSRYGHRDYLGAGCGMGYEATMYLLERGVRLTGT 191
           ADVEAEL RIGH LQPLDIVV NTRAG+RYGH DY+ AGCGMGYEATMYLLERGVRLTGT
Sbjct: 126 ADVEAELARIGHELQPLDIVVANTRAGARYGHADYVNAGCGMGYEATMYLLERGVRLTGT 185

Query: 192 DAWSWDAPFSYTAQRVAETGDKSLIWEGHKAGRDIGYCHLEKLHNLEALPAHGFTISCFP 251
           DAWSWDAPF YTA+++AETGD SLIWEGHKAGRDIGYCHLEKLHNLEALP+HGF ISCFP
Sbjct: 186 DAWSWDAPFCYTAKKIAETGDTSLIWEGHKAGRDIGYCHLEKLHNLEALPSHGFFISCFP 245

Query: 252 HKIRGASAGWTRAVAIFD 269
           HKIRGASAGWTRAVAIFD
Sbjct: 246 HKIRGASAGWTRAVAIFD 263


>ref|YP_001811492.1| cyclase family protein [Burkholderia ambifaria MC40-6]
 gb|ACB67276.1| cyclase family protein [Burkholderia ambifaria MC40-6]
          Length = 271

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 235/260 (90%), Positives = 245/260 (94%)

Query: 12  RFVDLSIYLENDVLSDPPPLAPKITYQKHADTLPEFMAMLPGTLPEDYPDGEAAAAEWVT 71
           RFVDLSIYLENDVLSDPPPLAP+I+YQKH DTLPEFMAMLPGT PEDYPDGEAAAAEWVT
Sbjct: 6   RFVDLSIYLENDVLSDPPPLAPRISYQKHGDTLPEFMAMLPGTKPEDYPDGEAAAAEWVT 65

Query: 72  LTTHNGTHLDAPWHFHSTQDAKNGGARPSITIDEVPLEWCFQAGVKLDFRHFPDGYVATA 131
           LTTH+GTHLDAPWHFHST DA  G ARPSITID+VPLEWCFQ GVKLDFRHFPDGYVATA
Sbjct: 66  LTTHSGTHLDAPWHFHSTMDASLGEARPSITIDQVPLEWCFQPGVKLDFRHFPDGYVATA 125

Query: 132 ADVEAELKRIGHVLQPLDIVVVNTRAGSRYGHRDYLGAGCGMGYEATMYLLERGVRLTGT 191
           ADVEAEL RIGH LQPLDIVVVNTRAGSRYGH DY+ AGCGMGYEATMYLLERG+RLTGT
Sbjct: 126 ADVEAELARIGHELQPLDIVVVNTRAGSRYGHDDYVNAGCGMGYEATMYLLERGMRLTGT 185

Query: 192 DAWSWDAPFSYTAQRVAETGDKSLIWEGHKAGRDIGYCHLEKLHNLEALPAHGFTISCFP 251
           DAWSWDAPFSYTA+++AETGD SLIWEGHKAGRDIGYCHLEKLHNL ALP  GFTISCFP
Sbjct: 186 DAWSWDAPFSYTAKKIAETGDTSLIWEGHKAGRDIGYCHLEKLHNLTALPPTGFTISCFP 245

Query: 252 HKIRGASAGWTRAVAIFDET 271
           HKIRGASAGWTRAVAIFD+T
Sbjct: 246 HKIRGASAGWTRAVAIFDDT 265


>ref|ZP_03570618.1| polyketide cyclase [Burkholderia multivorans CGD2M]
 ref|ZP_03577263.1| polyketide cyclase [Burkholderia multivorans CGD2]
 gb|EEE08840.1| polyketide cyclase [Burkholderia multivorans CGD2]
 gb|EEE16525.1| polyketide cyclase [Burkholderia multivorans CGD2M]
          Length = 271

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 236/260 (90%), Positives = 243/260 (93%)

Query: 12  RFVDLSIYLENDVLSDPPPLAPKITYQKHADTLPEFMAMLPGTLPEDYPDGEAAAAEWVT 71
           RFVDLSIYLENDVLSDPPPLAPKI YQKH DTLPEFMAMLPGT PEDYPDGEAAAAEWVT
Sbjct: 6   RFVDLSIYLENDVLSDPPPLAPKIRYQKHGDTLPEFMAMLPGTKPEDYPDGEAAAAEWVT 65

Query: 72  LTTHNGTHLDAPWHFHSTQDAKNGGARPSITIDEVPLEWCFQAGVKLDFRHFPDGYVATA 131
           LTTH+GTHLDAPWHFHST DA  G ARPSITID+VPLEWCFQ GVKLDFRHFPDGYVATA
Sbjct: 66  LTTHSGTHLDAPWHFHSTMDASLGEARPSITIDQVPLEWCFQPGVKLDFRHFPDGYVATA 125

Query: 132 ADVEAELKRIGHVLQPLDIVVVNTRAGSRYGHRDYLGAGCGMGYEATMYLLERGVRLTGT 191
           ADVEAEL RIGH LQPLDIVVVNTRAGSRYGH DY+ AGCGMGYEATMYLLERGVRLTGT
Sbjct: 126 ADVEAELARIGHELQPLDIVVVNTRAGSRYGHDDYVNAGCGMGYEATMYLLERGVRLTGT 185

Query: 192 DAWSWDAPFSYTAQRVAETGDKSLIWEGHKAGRDIGYCHLEKLHNLEALPAHGFTISCFP 251
           DAWSWDAPF YTA+++AETGD SLIWEGHKAGRDIGYCHLEKLHNL ALP  GFTISCFP
Sbjct: 186 DAWSWDAPFCYTAKKIAETGDTSLIWEGHKAGRDIGYCHLEKLHNLTALPPTGFTISCFP 245

Query: 252 HKIRGASAGWTRAVAIFDET 271
           HKIRGASAGWTRAVAIFD+T
Sbjct: 246 HKIRGASAGWTRAVAIFDDT 265