BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2689.p (384 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774433.1| major facilitator superfamily protein [Herba... 510 e-142 ref|YP_001811493.1| major facilitator transporter [Burkholderia ... 347 2e-93 ref|ZP_03585433.1| major facilitator superfamily MFS_1 [Burkhold... 340 2e-91 ref|YP_001341988.1| major facilitator transporter [Marinomonas s... 331 1e-88 ref|ZP_03570619.1| major facilitator superfamily MFS_1 [Burkhold... 330 3e-88 >ref|YP_003774433.1| major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] gb|ADJ62525.1| major facilitator superfamily MFS_1 protein [Herbaspirillum seropedicae SmR1] Length = 384 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 353/384 (91%), Positives = 366/384 (95%) Query: 1 MITTYSKRALAALMLAHCAGMIDLVALPVWVGTLVAHYHFDARQAGLLASLFLGGAVLAS 60 MIT+YSKR LAALMLAHCAGMIDLVALPVWVGTLVA+YHFDARQAGLLASLFLGGAVLAS Sbjct: 1 MITSYSKRGLAALMLAHCAGMIDLVALPVWVGTLVAYYHFDARQAGLLASLFLGGAVLAS 60 Query: 61 AVLAPRFDPETARWKAAIGFGLSALLFAVAAQTQHYLLLALLHAACGITTGLSLSVTHGT 120 A+LAPRFDPETARWKAAIGF LSALLF VAAQT HYLLLALLHA CGITTGLSLSVTHGT Sbjct: 61 AMLAPRFDPETARWKAAIGFALSALLFTVAAQTHHYLLLALLHAVCGITTGLSLSVTHGT 120 Query: 121 IARGSNPHRGFALVGIALGVFAILFLGSAPPIIASVGGPALFYLFAGVMAMGALACALAF 180 IARGSNPHRGFALVGIALGVFAILFLGSAPP++A +GG LFYLFAGVMA+GALA ALAF Sbjct: 121 IARGSNPHRGFALVGIALGVFAILFLGSAPPLVAHLGGSTLFYLFAGVMAVGALASALAF 180 Query: 181 PRPETDGLPRVAKPREPVPRQVWYGIAGIACMGLVQSMTFSFLERVGSDRGFGLEAVTGV 240 PR ETDGLPRV+ R PVPRQVWYGIAGIACMGLVQSMTFSFLERVGSDRGFGL+AVTGV Sbjct: 181 PRAETDGLPRVSTVRPPVPRQVWYGIAGIACMGLVQSMTFSFLERVGSDRGFGLQAVTGV 240 Query: 241 LIALGFVNLLPAPLAALLEKRLPARSVLMAGPLVQALLVVVIMSSLRFAPYAAAASVFAA 300 LIALGFVNLLPAPLAALLEKRLPAR+VLMAGPLVQALLV+VIMSS RFAPYAAAASVFAA Sbjct: 241 LIALGFVNLLPAPLAALLEKRLPARNVLMAGPLVQALLVLVIMSSARFAPYAAAASVFAA 300 Query: 301 VMIFTHTFAFGLMARLDRSGRAMAATPAMLMTGAAIGPILGGTLVQGWGYGSLGPVAVVL 360 VMIFTHTFAFGLMARLDRSGRAMAATPAMLMTGAAIGPILGGTLVQGWGYGSLGPVA+ L Sbjct: 301 VMIFTHTFAFGLMARLDRSGRAMAATPAMLMTGAAIGPILGGTLVQGWGYGSLGPVALAL 360 Query: 361 GVGASICFSRLPRAVAVQPQEALA 384 G+ AS CFSRLPRA AVQPQEALA Sbjct: 361 GLTASFCFSRLPRAAAVQPQEALA 384 >ref|YP_001811493.1| major facilitator transporter [Burkholderia ambifaria MC40-6] gb|ACB67277.1| major facilitator superfamily MFS_1 [Burkholderia ambifaria MC40-6] Length = 400 Score = 347 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 221/365 (60%), Positives = 268/365 (73%), Gaps = 5/365 (1%) Query: 12 ALMLAHCAGMIDLVALPVWVGTLVAHYHFDARQAGLLASLFLGGAVLASAVLAPRFDPET 71 ALM+AHCAGM+DLVALPVWVGTL+ Y D ++AGLLA+LFL GAVL+S +PR + Sbjct: 31 ALMVAHCAGMVDLVALPVWVGTLIGAYRLDPQKAGLLATLFLAGAVLSSVFFSPRLNRLP 90 Query: 72 ARWKAAIGFGLSALLFA--VAAQTQHYLLLALLHAACGITTGLSLSVTHGTIARGSNPHR 129 AR + +GFG++A F + YL+LA LHA GI G LS THGT+ R NPHR Sbjct: 91 ARAMSTVGFGIAAGAFVGITSVPVDRYLMLATLHAVAGIAVGCGLSFTHGTVGRSRNPHR 150 Query: 130 GFALVGIALGVFAILFLGSAPPIIASVGGPALFYLFAGVMAMGALACALAFPRPETDGLP 189 FA+ G+ALG+FAI FLG+ P +IA+ GGP LF++FA VM + A+ACALAFP Sbjct: 151 LFAISGLALGIFAIAFLGTVPGLIATHGGPMLFHVFASVMGVAAIACALAFP--SIQARR 208 Query: 190 RVAKPREP-VPRQVWYGIAGIACMGLVQSMTFSFLERVGSDRGFGLEAVTGVLIALGFVN 248 A EP R VW+G+AG+ CM L QSM FSF++R+G DRGFGL AV LIALGFVN Sbjct: 209 SAAAGDEPRFERVVWFGMAGVGCMALTQSMLFSFVQRIGLDRGFGLSAVIATLIALGFVN 268 Query: 249 LLPAPLAALLEKRLPARSVLMAGPLVQALLVVVIMSSLRFAPYAAAASVFAAVMIFTHTF 308 L PAP+A LLE R+P R V+ AGP+VQA L +VI S F YAAA SVFAAVMIFTHTF Sbjct: 269 LFPAPVAGLLETRVPGRRVVQAGPVVQAALALVITQSAAFVLYAAATSVFAAVMIFTHTF 328 Query: 309 AFGLMARLDRSGRAMAATPAMLMTGAAIGPILGGTLVQGWGYGSLGPVAVVLGVGASICF 368 AFG++AR+DR+GRA+AATPAMLMTGAAIGP+LGGTLV+ GYGSLG AV++ A+ICF Sbjct: 329 AFGMLARIDRTGRAVAATPAMLMTGAAIGPVLGGTLVKQSGYGSLGSAAVLIAAAAAICF 388 Query: 369 SRLPR 373 SRL R Sbjct: 389 SRLDR 393 >ref|ZP_03585433.1| major facilitator superfamily MFS_1 [Burkholderia multivorans CGD1] gb|EEE00025.1| major facilitator superfamily MFS_1 [Burkholderia multivorans CGD1] Length = 400 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 222/363 (61%), Positives = 269/363 (74%), Gaps = 5/363 (1%) Query: 12 ALMLAHCAGMIDLVALPVWVGTLVAHYHFDARQAGLLASLFLGGAVLASAVLAPRFDPET 71 ALM+AHCAGM+DLVALPVWVGTL+ Y D ++AGLLA+LFL GAVL+S +PR + Sbjct: 31 ALMIAHCAGMVDLVALPVWVGTLIGAYRLDPQRAGLLATLFLAGAVLSSVFFSPRLNRLP 90 Query: 72 ARWKAAIGFGLSA--LLFAVAAQTQHYLLLALLHAACGITTGLSLSVTHGTIARGSNPHR 129 AR + +GFG++A L + YL++A LHA G+ G LS THGT+ R NPHR Sbjct: 91 ARVMSTVGFGIAAGAFLGITSVPVDRYLMMAALHAVAGVAVGCGLSFTHGTVGRSRNPHR 150 Query: 130 GFALVGIALGVFAILFLGSAPPIIASVGGPALFYLFAGVMAMGALACALAFPRPETDGLP 189 FA+ G+ALGVFAI FLG+ P + A+ GGP LF +FAGVM + LACALAFP Sbjct: 151 LFAVAGLALGVFAIAFLGAVPGLAATHGGPTLFRVFAGVMGVATLACALAFP--SIQARR 208 Query: 190 RVAKPREP-VPRQVWYGIAGIACMGLVQSMTFSFLERVGSDRGFGLEAVTGVLIALGFVN 248 A EP R VW+G+AG+ CM L QSM FSF+ER+G DRGFGL AV LIALGFVN Sbjct: 209 DAATGDEPRFERVVWFGMAGVGCMALTQSMLFSFVERIGLDRGFGLRAVIATLIALGFVN 268 Query: 249 LLPAPLAALLEKRLPARSVLMAGPLVQALLVVVIMSSLRFAPYAAAASVFAAVMIFTHTF 308 L PAP+A LLE R+P R V+ AGP+VQA+L +VI S FAPYAAA SVFAAVMIFTHTF Sbjct: 269 LFPAPVAGLLETRVPGRKVVQAGPVVQAVLALVITQSAAFAPYAAATSVFAAVMIFTHTF 328 Query: 309 AFGLMARLDRSGRAMAATPAMLMTGAAIGPILGGTLVQGWGYGSLGPVAVVLGVGASICF 368 AFG++AR+DR+GRA+AATPAMLMTGAAIGP+LGGTLV+ +GYGSLG AV++ A+ICF Sbjct: 329 AFGMLARIDRTGRAVAATPAMLMTGAAIGPVLGGTLVKQFGYGSLGFAAVLIATAAAICF 388 Query: 369 SRL 371 SRL Sbjct: 389 SRL 391 >ref|YP_001341988.1| major facilitator transporter [Marinomonas sp. MWYL1] gb|ABR72053.1| major facilitator superfamily MFS_1 [Marinomonas sp. MWYL1] Length = 387 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 190/362 (52%), Positives = 252/362 (69%), Gaps = 2/362 (0%) Query: 12 ALMLAHCAGMIDLVALPVWVGTLVAHYHFDARQAGLLASLFLGGAVLASAVLAPRFDPET 71 ALM++H AGM+DLVALP+W+G LVA YHFD++QAG L +LFL GAV AS ++APRF Sbjct: 12 ALMVSHSAGMLDLVALPLWIGVLVATYHFDSQQAGGLVTLFLIGAVCASILIAPRFKKLN 71 Query: 72 ARWKAAIGFGLSALLFAVAAQTQHYLLLALLHAACGITTGLSLSVTHGTIARGSNPHRGF 131 R ++ GF S L F A+Q Y+ L+ LH GI++ +LS+ HGT ARG NPHR F Sbjct: 72 RRMVSSFGFFASGLCFFAASQINDYVQLSFLHLLAGISSSAALSMAHGTFARGENPHRLF 131 Query: 132 ALVGIALGVFAILFLGSAPPIIASVGGPALFYLFAGVMAMGALACALAFPRPETD--GLP 189 A+ G+ LG+ A +F+G+ P I +VGG +LF +F G+M A CA+AFP D G Sbjct: 132 AIAGLTLGIMAFVFMGATPNITKAVGGHSLFIIFGGIMTFAAFVCAVAFPSLVLDEEGCE 191 Query: 190 RVAKPREPVPRQVWYGIAGIACMGLVQSMTFSFLERVGSDRGFGLEAVTGVLIALGFVNL 249 + +P VWYGI GI+ M + Q+MTFSF+ERVGSDRGF E+VT VLI L +N+ Sbjct: 192 NAKQVVTKIPSSVWYGIVGISLMAVTQAMTFSFMERVGSDRGFSTESVTLVLIVLTVINI 251 Query: 250 LPAPLAALLEKRLPARSVLMAGPLVQALLVVVIMSSLRFAPYAAAASVFAAVMIFTHTFA 309 + A A + EKRL AR VL GP++Q +L ++M++ FA YAA+AS F ++MIFTHTF Sbjct: 252 VAAASAGIFEKRLSARVVLCTGPILQIILSNIMMNASSFAFYAASASCFVSLMIFTHTFV 311 Query: 310 FGLMARLDRSGRAMAATPAMLMTGAAIGPILGGTLVQGWGYGSLGPVAVVLGVGASICFS 369 FGL+ARLD SGRA+AATPAMLM GAA+GPILGGT+++ GY +G A+V G + +CF Sbjct: 312 FGLLARLDESGRALAATPAMLMIGAAVGPILGGTIIKFVGYQGIGIAALVFGTISLVCFI 371 Query: 370 RL 371 R+ Sbjct: 372 RV 373 >ref|ZP_03570619.1| major facilitator superfamily MFS_1 [Burkholderia multivorans CGD2M] ref|ZP_03577264.1| major facilitator superfamily MFS_1 [Burkholderia multivorans CGD2] gb|EEE08841.1| major facilitator superfamily MFS_1 [Burkholderia multivorans CGD2] gb|EEE16526.1| major facilitator superfamily MFS_1 [Burkholderia multivorans CGD2M] Length = 400 Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 217/369 (58%), Positives = 264/369 (71%), Gaps = 3/369 (0%) Query: 12 ALMLAHCAGMIDLVALPVWVGTLVAHYHFDARQAGLLASLFLGGAVLASAVLAPRFDPET 71 ALMLAHCAGM+DLVALPVWVGTL+ Y D ++AGLL +LFL GAVL+S +PR + Sbjct: 31 ALMLAHCAGMVDLVALPVWVGTLIGAYRLDPQKAGLLVTLFLAGAVLSSVFFSPRLNRLP 90 Query: 72 ARWKAAIGFGLSALLF--AVAAQTQHYLLLALLHAACGITTGLSLSVTHGTIARGSNPHR 129 AR + +GFG++A F + YL +A LHA G+ G LS THGT+ R NPHR Sbjct: 91 ARAMSTVGFGMAACAFLGITSVSVDRYLTMAALHAVAGVAVGCGLSFTHGTVGRSRNPHR 150 Query: 130 GFALVGIALGVFAILFLGSAPPIIASVGGPALFYLFAGVMAMGALACALAFPRPETDGLP 189 FA+ G+ALG+FAI FLG P +IA+ GGP LF +FA VM + +ACALAFP + Sbjct: 151 LFAVAGLALGIFAIAFLGIVPGLIATHGGPMLFRVFASVMGVATIACALAFPSIQARRST 210 Query: 190 RVAKPREPVPRQVWYGIAGIACMGLVQSMTFSFLERVGSDRGFGLEAVTGVLIALGFVNL 249 R VW+G+AG+ CM L QSM FSF++R+G DRGFGL AV LIALGFVNL Sbjct: 211 AAGVERR-FEHAVWFGMAGVGCMALTQSMLFSFVQRIGLDRGFGLSAVIATLIALGFVNL 269 Query: 250 LPAPLAALLEKRLPARSVLMAGPLVQALLVVVIMSSLRFAPYAAAASVFAAVMIFTHTFA 309 PAP+A LLE R+P R V+ AG +VQA L +VI S FAPYAAA SVFAAVMIFTHTFA Sbjct: 270 FPAPVAGLLETRVPGRKVVQAGAVVQAALALVITQSAAFAPYAAATSVFAAVMIFTHTFA 329 Query: 310 FGLMARLDRSGRAMAATPAMLMTGAAIGPILGGTLVQGWGYGSLGPVAVVLGVGASICFS 369 FG++AR+DR+GRA+AATPAMLMTGAAIGP+LGGTLV+ +GYGSLG AV++ A+ICFS Sbjct: 330 FGMLARIDRTGRAVAATPAMLMTGAAIGPLLGGTLVKQFGYGSLGFAAVLIAAAAAICFS 389 Query: 370 RLPRAVAVQ 378 RL R Q Sbjct: 390 RLDRPSPSQ 398