BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2685.p (420 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774429.1| hypothetical protein Hsero_1004 [Herbaspiril... 765 0.0 ref|ZP_07774648.1| hypothetical protein PFWH6_2040 [Pseudomonas ... 677 0.0 ref|YP_004353397.1| hypothetical protein PSEBR_a2127 [Pseudomona... 674 0.0 ref|ZP_05126827.1| conserved hypothetical protein [gamma proteob... 670 0.0 ref|ZP_08141495.1| hypothetical protein G1E_19585 [Pseudomonas s... 668 0.0 >ref|YP_003774429.1| hypothetical protein Hsero_1004 [Herbaspirillum seropedicae SmR1] gb|ADJ62521.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 386 Score = 765 bits (1976), Expect = 0.0, Method: Composition-based stats. Identities = 363/386 (94%), Positives = 376/386 (97%) Query: 35 MFRYFPTNYVWNLSVDLAIEMGARIGEIEAMCAPLQEAAKQPDAEGTAAFRATWADMAEK 94 MFRYFPTNYVWNLSVDLAIEMGARIGEIEAMCAPLQEAA+QPDAEGTAAFRATWADMAEK Sbjct: 1 MFRYFPTNYVWNLSVDLAIEMGARIGEIEAMCAPLQEAARQPDAEGTAAFRATWADMAEK 60 Query: 95 LCSLAAEDEARGRLLSAGAKYKRAASYLLTCERLQGHGAPGRLELYRRFLEVFQRGLTLA 154 LCSLAAEDE RGRLLSAG KYKRAASYLLTCERLQGHGAPGRLELY+RFLEVFQRG+ LA Sbjct: 61 LCSLAAEDEMRGRLLSAGEKYKRAASYLLTCERLQGHGAPGRLELYKRFLEVFQRGIALA 120 Query: 155 GDNCERVEIPYEGKVISGLYIRANNVQGPAPILVQLNGLDSTKEMKYLVGLPGWLAERGV 214 G+NCERVEI YEG+VISGLY RA NVQGPAP+LVQLNGLDSTKEMKYLVGLPGWLAERGV Sbjct: 121 GENCERVEIAYEGRVISGLYTRARNVQGPAPVLVQLNGLDSTKEMKYLVGLPGWLAERGV 180 Query: 215 SSLVIDQPGTGEALRLHGMTARFDAEHWARHVVDWLEQRDDVDASRIGCEGVSLGGYYCP 274 +SLVIDQPGTGEALRLHG+TARFDAEHWARHVVDWLEQR+DVD +RIGCEGVSLGGYYCP Sbjct: 181 ASLVIDQPGTGEALRLHGLTARFDAEHWARHVVDWLEQREDVDPTRIGCEGVSLGGYYCP 240 Query: 275 RVVAMEPRFACGVVWGANHDWRDVQKKRLEKEGDFPVPHYWQHVCWVWGAKDIDGFMRIA 334 RVVAMEPRFACGVVWGANHDWRDVQK+RLEKEGDFPVPHYWQHVCWVWGAKDID FMRIA Sbjct: 241 RVVAMEPRFACGVVWGANHDWRDVQKRRLEKEGDFPVPHYWQHVCWVWGAKDIDDFMRIA 300 Query: 335 EDVHLDGVVEKIRVPFLVTHGEKDTQIPLKWAHRTYEQLVNSPKRELKIFTDREGGAQHA 394 EDVHLDGVVEKIRVPFLVTHGEKD+QIPLKWAHRTYEQLVNSPKRELK+FTDREGG QHA Sbjct: 301 EDVHLDGVVEKIRVPFLVTHGEKDSQIPLKWAHRTYEQLVNSPKRELKVFTDREGGVQHA 360 Query: 395 SFDNSINAGHVIADWVAETLGGRTKR 420 SFDNSINAGH IADWVAETLGGRTKR Sbjct: 361 SFDNSINAGHYIADWVAETLGGRTKR 386 >ref|ZP_07774648.1| hypothetical protein PFWH6_2040 [Pseudomonas fluorescens WH6] gb|EFQ64199.1| hypothetical protein PFWH6_2040 [Pseudomonas fluorescens WH6] Length = 385 Score = 677 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 316/384 (82%), Positives = 343/384 (89%) Query: 35 MFRYFPTNYVWNLSVDLAIEMGARIGEIEAMCAPLQEAAKQPDAEGTAAFRATWADMAEK 94 MFRYFPTNYVWNLSVDLAIEMGARIGEIE MCAPLQEAAKQPDA G+ AFR TWA+MA+K Sbjct: 1 MFRYFPTNYVWNLSVDLAIEMGARIGEIEEMCAPLQEAAKQPDAAGSKAFRETWANMADK 60 Query: 95 LCSLAAEDEARGRLLSAGAKYKRAASYLLTCERLQGHGAPGRLELYRRFLEVFQRGLTLA 154 LCSLA EDE +GR+LSAG KY RAA+Y L+CERLQ HGAPGR ELY+RFL+ FQR + LA Sbjct: 61 LCSLAEEDEGKGRMLSAGEKYNRAATYYLSCERLQAHGAPGRTELYQRFLQTFQRSIELA 120 Query: 155 GDNCERVEIPYEGKVISGLYIRANNVQGPAPILVQLNGLDSTKEMKYLVGLPGWLAERGV 214 +NCERVEIPYEGK ISGL +RA V GPAPILVQ+NGLDSTKEMKY VGLP WLA+RGV Sbjct: 121 RENCERVEIPYEGKHISGLLVRAEGVSGPAPILVQVNGLDSTKEMKYRVGLPAWLAKRGV 180 Query: 215 SSLVIDQPGTGEALRLHGMTARFDAEHWARHVVDWLEQRDDVDASRIGCEGVSLGGYYCP 274 SSL+IDQPGTGEALRLH +TARFD+EHWA VVDWLE RDDVD RIG EGVSLGGYYCP Sbjct: 181 SSLIIDQPGTGEALRLHNLTARFDSEHWASRVVDWLETRDDVDVKRIGLEGVSLGGYYCP 240 Query: 275 RVVAMEPRFACGVVWGANHDWRDVQKKRLEKEGDFPVPHYWQHVCWVWGAKDIDGFMRIA 334 R VA EPRFACGVVWGANHDWRDVQK+RLEKEG FPVPHYW HV WVWGAKD D FM IA Sbjct: 241 RAVAFEPRFACGVVWGANHDWRDVQKRRLEKEGSFPVPHYWSHVAWVWGAKDTDEFMTIA 300 Query: 335 EDVHLDGVVEKIRVPFLVTHGEKDTQIPLKWAHRTYEQLVNSPKRELKIFTDREGGAQHA 394 E+VHLDG++++I+VPFLVTHGEKD+QIPLKWAHRTYEQLVNSPKRELKIFT+REGG QH+ Sbjct: 301 ENVHLDGILDRIKVPFLVTHGEKDSQIPLKWAHRTYEQLVNSPKRELKIFTEREGGVQHS 360 Query: 395 SFDNSINAGHVIADWVAETLGGRT 418 SFDNSINAG IADWVAE LGGRT Sbjct: 361 SFDNSINAGQYIADWVAEVLGGRT 384 >ref|YP_004353397.1| hypothetical protein PSEBR_a2127 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA68393.1| conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 385 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 315/384 (82%), Positives = 343/384 (89%) Query: 35 MFRYFPTNYVWNLSVDLAIEMGARIGEIEAMCAPLQEAAKQPDAEGTAAFRATWADMAEK 94 MFRYFPTNYVWNLSVDLAIEMGARIGEIE MCAPLQEAAKQPDA G+ AFR TWA+MA+K Sbjct: 1 MFRYFPTNYVWNLSVDLAIEMGARIGEIEEMCAPLQEAAKQPDAAGSKAFRETWANMADK 60 Query: 95 LCSLAAEDEARGRLLSAGAKYKRAASYLLTCERLQGHGAPGRLELYRRFLEVFQRGLTLA 154 LC LA EDE++GR+LSAG KY RAA+Y L+CERLQ HGAPGR ELY+RFL FQRG+ LA Sbjct: 61 LCGLAEEDESKGRMLSAGEKYNRAATYYLSCERLQAHGAPGRTELYQRFLHTFQRGIELA 120 Query: 155 GDNCERVEIPYEGKVISGLYIRANNVQGPAPILVQLNGLDSTKEMKYLVGLPGWLAERGV 214 +NC RVEIPYEGK ISGL +RA V GPAPILVQ+NGLDSTKEMKY VGLP WLA+RGV Sbjct: 121 RENCVRVEIPYEGKHISGLLVRAEGVSGPAPILVQVNGLDSTKEMKYRVGLPAWLAKRGV 180 Query: 215 SSLVIDQPGTGEALRLHGMTARFDAEHWARHVVDWLEQRDDVDASRIGCEGVSLGGYYCP 274 SSL+IDQPGTGEALRLH +TARFD+EHWA VVDWLE RDDVDA RIG EGVSLGGYYCP Sbjct: 181 SSLIIDQPGTGEALRLHNLTARFDSEHWASPVVDWLETRDDVDAKRIGLEGVSLGGYYCP 240 Query: 275 RVVAMEPRFACGVVWGANHDWRDVQKKRLEKEGDFPVPHYWQHVCWVWGAKDIDGFMRIA 334 R VA EPRFACGVVWGANHDWRDVQK+RLEKEG FPVPHYW HV WVWGAKD D FM IA Sbjct: 241 RAVAFEPRFACGVVWGANHDWRDVQKRRLEKEGSFPVPHYWSHVAWVWGAKDTDEFMTIA 300 Query: 335 EDVHLDGVVEKIRVPFLVTHGEKDTQIPLKWAHRTYEQLVNSPKRELKIFTDREGGAQHA 394 E+VHLDG++++I+VPFLVTHGEKD+QIPLKWAHRTYEQLVNSPKRELK+FT+REGG QH+ Sbjct: 301 ENVHLDGILDRIKVPFLVTHGEKDSQIPLKWAHRTYEQLVNSPKRELKVFTEREGGVQHS 360 Query: 395 SFDNSINAGHVIADWVAETLGGRT 418 SFDNSINAG IADWVAE LGGRT Sbjct: 361 SFDNSINAGQYIADWVAEVLGGRT 384 >ref|ZP_05126827.1| conserved hypothetical protein [gamma proteobacterium NOR5-3] gb|EED33374.1| conserved hypothetical protein [gamma proteobacterium NOR5-3] Length = 387 Score = 670 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 312/386 (80%), Positives = 348/386 (90%) Query: 35 MFRYFPTNYVWNLSVDLAIEMGARIGEIEAMCAPLQEAAKQPDAEGTAAFRATWADMAEK 94 MF+YFPTNYVWNLSVDLAIEMGARIGEIEAMCAPLQEAAK+PDA+G AFR TWA MA++ Sbjct: 1 MFKYFPTNYVWNLSVDLAIEMGARIGEIEAMCAPLQEAAKKPDAQGVQAFRDTWAKMADQ 60 Query: 95 LCSLAAEDEARGRLLSAGAKYKRAASYLLTCERLQGHGAPGRLELYRRFLEVFQRGLTLA 154 LC LA EDEARGR+LSAG KY RAASYL+TCERLQ H APGRLELY+R L++F++G++LA Sbjct: 61 LCELAEEDEARGRMLSAGEKYSRAASYLITCERLQAHKAPGRLELYKRMLDLFEKGISLA 120 Query: 155 GDNCERVEIPYEGKVISGLYIRANNVQGPAPILVQLNGLDSTKEMKYLVGLPGWLAERGV 214 +NCERVEIPYEGK ISGL++RA N GPAP+LVQ+NGLDSTKEMKY VGLP WLA+RGV Sbjct: 121 DENCERVEIPYEGKHISGLFVRAQNGSGPAPLLVQVNGLDSTKEMKYRVGLPLWLAKRGV 180 Query: 215 SSLVIDQPGTGEALRLHGMTARFDAEHWARHVVDWLEQRDDVDASRIGCEGVSLGGYYCP 274 SSL+IDQPGTGEALRL + AR+D+EHWA VVDWLE RDDVDASRIG EGVSLGGY+CP Sbjct: 181 SSLIIDQPGTGEALRLQNLVARYDSEHWASPVVDWLEARDDVDASRIGMEGVSLGGYFCP 240 Query: 275 RVVAMEPRFACGVVWGANHDWRDVQKKRLEKEGDFPVPHYWQHVCWVWGAKDIDGFMRIA 334 R VA EPRFACGV WGANHDWRDVQK+RLE EGDFPVPHYW HV WVWGA+D+D FM IA Sbjct: 241 RAVAFEPRFACGVCWGANHDWRDVQKRRLENEGDFPVPHYWAHVRWVWGAEDMDEFMAIA 300 Query: 335 EDVHLDGVVEKIRVPFLVTHGEKDTQIPLKWAHRTYEQLVNSPKRELKIFTDREGGAQHA 394 E+VHLDGVVEKI+VPFLVTHGEKD+QIPLKWA RTYEQL NSPKRELK+FT+REGG QH+ Sbjct: 301 ENVHLDGVVEKIKVPFLVTHGEKDSQIPLKWAERTYEQLSNSPKRELKVFTEREGGVQHS 360 Query: 395 SFDNSINAGHVIADWVAETLGGRTKR 420 SFDNSINAGH IADWVAETLGG+T + Sbjct: 361 SFDNSINAGHYIADWVAETLGGQTAK 386 >ref|ZP_08141495.1| hypothetical protein G1E_19585 [Pseudomonas sp. TJI-51] gb|EGB97211.1| hypothetical protein G1E_19585 [Pseudomonas sp. TJI-51] Length = 385 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 310/384 (80%), Positives = 343/384 (89%) Query: 35 MFRYFPTNYVWNLSVDLAIEMGARIGEIEAMCAPLQEAAKQPDAEGTAAFRATWADMAEK 94 MFRYFPTNYVWNLSVDLAIEMGAR+GEIE MCAPLQEAAKQPDA GTAAFR TW+ MA+K Sbjct: 1 MFRYFPTNYVWNLSVDLAIEMGARMGEIEEMCAPLQEAAKQPDAAGTAAFRETWSKMADK 60 Query: 95 LCSLAAEDEARGRLLSAGAKYKRAASYLLTCERLQGHGAPGRLELYRRFLEVFQRGLTLA 154 LC LA EDEA GRLLSAG KY RAA+Y LTCERLQ HGAPGR LY++F+ F RG++L+ Sbjct: 61 LCGLAEEDEAAGRLLSAGEKYNRAATYYLTCERLQAHGAPGREALYKQFVSTFARGISLS 120 Query: 155 GDNCERVEIPYEGKVISGLYIRANNVQGPAPILVQLNGLDSTKEMKYLVGLPGWLAERGV 214 +NCERVEIPYEGKV+SGL++RA V GPAPIL+Q+NGLDSTKEMKY VGLP WLA+RGV Sbjct: 121 KENCERVEIPYEGKVLSGLFVRAEGVNGPAPILLQVNGLDSTKEMKYRVGLPAWLAKRGV 180 Query: 215 SSLVIDQPGTGEALRLHGMTARFDAEHWARHVVDWLEQRDDVDASRIGCEGVSLGGYYCP 274 SSL+IDQPGTGEALRLH +TARFD+EHWA VVDWLE +VD+ RIG EGVSLGGYYCP Sbjct: 181 SSLLIDQPGTGEALRLHDLTARFDSEHWASRVVDWLETHPEVDSKRIGMEGVSLGGYYCP 240 Query: 275 RVVAMEPRFACGVVWGANHDWRDVQKKRLEKEGDFPVPHYWQHVCWVWGAKDIDGFMRIA 334 R VA EPRFACGVVWGANHDWRDVQK+RLEKEG PVPHYW HVCWVWGAKDI+ FM I+ Sbjct: 241 RAVAFEPRFACGVVWGANHDWRDVQKRRLEKEGSLPVPHYWAHVCWVWGAKDIEDFMPIS 300 Query: 335 EDVHLDGVVEKIRVPFLVTHGEKDTQIPLKWAHRTYEQLVNSPKRELKIFTDREGGAQHA 394 E VHLDG++++I+VPFLVTHGEKD+QIPLKWAHRT+EQLVNSPKRELKIFTDREGG QH+ Sbjct: 301 EKVHLDGILDRIKVPFLVTHGEKDSQIPLKWAHRTFEQLVNSPKRELKIFTDREGGVQHS 360 Query: 395 SFDNSINAGHVIADWVAETLGGRT 418 SFDNSINAG IADWVAETLGGRT Sbjct: 361 SFDNSINAGQYIADWVAETLGGRT 384