BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2671.p (283 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEG71993.1| signal transduction protein eal domain protein [R... 198 9e-49 emb|CAQ36929.1| signal transduction protein eal domain [Ralstoni... 198 9e-49 ref|ZP_00946159.1| Hypothetical Protein RRSL_00812 [Ralstonia so... 197 2e-48 ref|NP_105541.1| hypothetical protein mlr4740 [Mesorhizobium lot... 196 3e-48 ref|YP_004139955.1| diguanylate cyclase [Mesorhizobium ciceri bi... 196 5e-48 >gb|AEG71993.1| signal transduction protein eal domain protein [Ralstonia solanacearum Po82] Length = 540 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 106/241 (43%), Positives = 140/241 (58%) Query: 2 SPSITPDDLIRGIEQDEFWPALQPIVDLRTKRIMSFEMLARWTSRQHGEVSPGVFIPLAE 61 + SIT + L+ +E+D PA Q +VDLR + FE+L+RWT GEV P VFIP AE Sbjct: 10 AASITRERLLDALERDAIEPAFQCLVDLRDHGLKGFEVLSRWTEADLGEVPPAVFIPAAE 69 Query: 62 SAGLLTRLLGSLLPKVAPHMTEWPSHIKLAVNVSPTQIATRQGFEQLRDVLSATHRNAAR 121 GL+ RLL +L K W LA N+SP Q+ F +R+ + AR Sbjct: 70 QHGLIDRLLVRVLSKACQAAASWGGDFFLAFNLSPLQLQNTALFSLIREAAESGRFPLAR 129 Query: 122 IQIELTEECMCNDPAVVRIHAKELKALGYTFSLDDFGTGFSGLSRLNTLPFDEIKIDASF 181 +Q+E+TE + D ELK G +LDDFG GFS L RL FD+IKIDASF Sbjct: 130 LQMEITESVLVGDLGAAASLVGELKRAGIRIALDDFGIGFSNLERLQAFAFDKIKIDASF 189 Query: 182 ISQIETNPKSLPLVRWMIALGSGLGMDGVAEGIETQAQLDLLLRTGCRLGQGYLFGRPIP 241 + +E + S +V +I LG LG+D VAEG+ET+AQ D+L GC +GQG+LFG P+P Sbjct: 190 VQHMEGDSDSRKIVASIIGLGQSLGVDVVAEGVETRAQADILRGLGCGMGQGWLFGHPVP 249 Query: 242 A 242 A Sbjct: 250 A 250 >emb|CAQ36929.1| signal transduction protein eal domain [Ralstonia solanacearum MolK2] Length = 534 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 106/241 (43%), Positives = 141/241 (58%) Query: 2 SPSITPDDLIRGIEQDEFWPALQPIVDLRTKRIMSFEMLARWTSRQHGEVSPGVFIPLAE 61 + SIT + L+ +E+D PA Q +VDLR + FE+L+RWT GEV P VFIP+AE Sbjct: 4 AASITRERLLDALERDAIEPAFQCLVDLRDHGLKGFEVLSRWTEADLGEVPPAVFIPVAE 63 Query: 62 SAGLLTRLLGSLLPKVAPHMTEWPSHIKLAVNVSPTQIATRQGFEQLRDVLSATHRNAAR 121 GL+ RLL +L K W LA N+SP Q+ F +R+ + AR Sbjct: 64 RHGLIDRLLVRVLSKACQAAAAWGGDFFLAFNLSPLQLQNTALFSLIREAAESGRFPLAR 123 Query: 122 IQIELTEECMCNDPAVVRIHAKELKALGYTFSLDDFGTGFSGLSRLNTLPFDEIKIDASF 181 +Q+E+TE + D ELK G +LDDFG GFS L RL FD+IKIDASF Sbjct: 124 LQMEITESVLVGDLGAAASLVGELKRAGIRIALDDFGIGFSNLERLQAFAFDKIKIDASF 183 Query: 182 ISQIETNPKSLPLVRWMIALGSGLGMDGVAEGIETQAQLDLLLRTGCRLGQGYLFGRPIP 241 + +E + S +V +I LG LG+D VAEG+ET+AQ D+L GC +GQG+LFG P+P Sbjct: 184 VQHMEGDSDSRKIVASIIGLGQSLGVDVVAEGVETRAQADILRGLGCGMGQGWLFGHPVP 243 Query: 242 A 242 A Sbjct: 244 A 244 >ref|ZP_00946159.1| Hypothetical Protein RRSL_00812 [Ralstonia solanacearum UW551] ref|YP_002257809.1| signal transduction protein eal domain [Ralstonia solanacearum IPO1609] gb|EAP71327.1| Hypothetical Protein RRSL_00812 [Ralstonia solanacearum UW551] emb|CAQ59697.1| signal transduction protein eal domain [Ralstonia solanacearum IPO1609] Length = 534 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 106/241 (43%), Positives = 140/241 (58%) Query: 2 SPSITPDDLIRGIEQDEFWPALQPIVDLRTKRIMSFEMLARWTSRQHGEVSPGVFIPLAE 61 + SIT + L+ +E+D PA Q +VDLR + FE+L+RWT GEV P VFIP AE Sbjct: 4 AASITRERLLDALERDAIEPAFQCLVDLRDHGLKGFEVLSRWTEADLGEVPPAVFIPAAE 63 Query: 62 SAGLLTRLLGSLLPKVAPHMTEWPSHIKLAVNVSPTQIATRQGFEQLRDVLSATHRNAAR 121 GL+ RLL +L K W LA N+SP Q+ F +R+ + AR Sbjct: 64 RHGLIDRLLVRVLSKACQAAAAWGGDFFLAFNLSPLQLQNTALFSLIREAAESGRFPLAR 123 Query: 122 IQIELTEECMCNDPAVVRIHAKELKALGYTFSLDDFGTGFSGLSRLNTLPFDEIKIDASF 181 +Q+E+TE + D ELK G +LDDFG GFS L RL FD+IKIDASF Sbjct: 124 LQMEITESVLVGDLGAAASLVGELKRAGIRIALDDFGIGFSNLERLQAFAFDKIKIDASF 183 Query: 182 ISQIETNPKSLPLVRWMIALGSGLGMDGVAEGIETQAQLDLLLRTGCRLGQGYLFGRPIP 241 + +E + S +V +I LG LG+D VAEG+ET+AQ D+L GC +GQG+LFG P+P Sbjct: 184 VQHMEGDSDSRKIVASIIGLGQSLGVDVVAEGVETRAQADILRGLGCGMGQGWLFGHPVP 243 Query: 242 A 242 A Sbjct: 244 A 244 >ref|NP_105541.1| hypothetical protein mlr4740 [Mesorhizobium loti MAFF303099] dbj|BAB51327.1| mlr4740 [Mesorhizobium loti MAFF303099] Length = 449 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 105/240 (43%), Positives = 144/240 (60%) Query: 10 LIRGIEQDEFWPALQPIVDLRTKRIMSFEMLARWTSRQHGEVSPGVFIPLAESAGLLTRL 69 L R + E P QPIVDL T+R + FE LARWT R G V P VFIP+AE G++ L Sbjct: 197 LRRAVSAGEVEPHFQPIVDLTTRRTIGFETLARWTDRDLGAVPPTVFIPIAEERGIIGPL 256 Query: 70 LGSLLPKVAPHMTEWPSHIKLAVNVSPTQIATRQGFEQLRDVLSATHRNAARIQIELTEE 129 +L K WPS + L+ N+SP+Q+ + + +L T + R++IE+TE Sbjct: 257 SQLVLRKATEAARSWPSDLFLSFNLSPSQLVDQNTGLHILAILDRTGFDPRRLEIEITET 316 Query: 130 CMCNDPAVVRIHAKELKALGYTFSLDDFGTGFSGLSRLNTLPFDEIKIDASFISQIETNP 189 + NDPA ++L+ +G SLDDFGTG S L RL FD++KID +F+S I + Sbjct: 317 GLMNDPASAAQIVEDLRRVGIRVSLDDFGTGQSSLGRLREFHFDKLKIDRAFVSSILDDR 376 Query: 190 KSLPLVRWMIALGSGLGMDGVAEGIETQAQLDLLLRTGCRLGQGYLFGRPIPAHCCLALL 249 S ++R ++A+ GLGMD VAEGIE +AQ D L++ GC GQGYLFG+P+ A L L Sbjct: 377 PSEHIIRAILAMCEGLGMDVVAEGIEEEAQADRLVQFGCAGGQGYLFGKPVDADATLGYL 436 >ref|YP_004139955.1| diguanylate cyclase [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV09905.1| diguanylate cyclase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 449 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 104/240 (43%), Positives = 143/240 (59%) Query: 10 LIRGIEQDEFWPALQPIVDLRTKRIMSFEMLARWTSRQHGEVSPGVFIPLAESAGLLTRL 69 L R + E P QPIVDL T+R + FE LARWT R G V P VFIP+AE G++ L Sbjct: 197 LRRAVSAGEVEPHFQPIVDLATRRTIGFETLARWTDRDLGSVPPTVFIPIAEERGIIGPL 256 Query: 70 LGSLLPKVAPHMTEWPSHIKLAVNVSPTQIATRQGFEQLRDVLSATHRNAARIQIELTEE 129 +L K WP + L+ N+SP+Q+ + + +L T + R++IE+TE Sbjct: 257 SQLVLRKATEAARSWPKDLFLSFNLSPSQLVDQNTGLHILAILDRTGFDPRRLEIEITET 316 Query: 130 CMCNDPAVVRIHAKELKALGYTFSLDDFGTGFSGLSRLNTLPFDEIKIDASFISQIETNP 189 + NDPA ++L+ +G SLDDFGTG S L RL FD++KID +F+S I + Sbjct: 317 GLMNDPASAAQIVEDLRRVGIRVSLDDFGTGQSSLGRLREFHFDKLKIDRAFVSSILDDR 376 Query: 190 KSLPLVRWMIALGSGLGMDGVAEGIETQAQLDLLLRTGCRLGQGYLFGRPIPAHCCLALL 249 S ++R ++A+ GLGMD VAEGIE +AQ D L++ GC GQGYLFG+P+ A L L Sbjct: 377 PSEHIIRAILAMCEGLGMDVVAEGIEQEAQADRLVQFGCAGGQGYLFGKPVDADATLGYL 436