BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2664.p (345 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774419.1| metal ion ABC transporter ATPase [Herbaspiri... 627 e-178 ref|YP_004754369.1| methionine ABC transporter ATP-binding prote... 544 e-153 ref|YP_003907831.1| ABC transporter-like protein [Burkholderia s... 468 e-130 ref|ZP_02884890.1| ABC transporter related [Burkholderia gramini... 468 e-130 ref|YP_560004.1| ABC methionine transporter, ATPase subunit [Bur... 468 e-130 >ref|YP_003774419.1| metal ion ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ62511.1| ABC-type metal ion transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 345 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 339/345 (98%), Positives = 344/345 (99%) Query: 1 MIEIQAVTQRFGNVEAVRNVDLSIRKGEIFGIIGRSGAGKSTLVRTLNLLNRPTSGRIVL 60 MIEIQAVTQRFGNVEAVR VDLSIRKGEIFGIIGRSGAGKSTLVRTLNLLNRPTSGRIVL Sbjct: 1 MIEIQAVTQRFGNVEAVRKVDLSIRKGEIFGIIGRSGAGKSTLVRTLNLLNRPTSGRIVL 60 Query: 61 DGQDLTSLSSSQLREARRGIGMIFQHFNLLSSRSVYDNIALPLELAGKSKSEIAAKVEPL 120 DGQDLTSLS++QLREARRGIGMIFQHFNLLSSRSVYDNIALPLELAGKSK+EIAAKVEPL Sbjct: 61 DGQDLTSLSAAQLREARRGIGMIFQHFNLLSSRSVYDNIALPLELAGKSKAEIAAKVEPL 120 Query: 121 LELVGLTALRDRYPAQISGGQKQRVGIARALANDPKVLLSDEATSALDPETTRSILELLR 180 LELVGLTALRDRYPAQISGGQKQRVGIARALANDPKVLLSDEATSALDPETTRSILELLR Sbjct: 121 LELVGLTALRDRYPAQISGGQKQRVGIARALANDPKVLLSDEATSALDPETTRSILELLR 180 Query: 181 KINKELGLTIVLITHQMEVIKQICDRVAVMEAGQVIEQGEVLEVFRQPRHEVTRALIGDV 240 KINKELGLTIVLITHQMEVIKQICDRVAVMEAGQVIEQGEVL+VFRQPRHEVTRALIGDV Sbjct: 181 KINKELGLTIVLITHQMEVIKQICDRVAVMEAGQVIEQGEVLDVFRQPRHEVTRALIGDV 240 Query: 241 IAHELPKGVLARLRERLARADAGQGTDHLFRFAFTGNDVDQPHLSEAVRRFNLNFNILHG 300 IAHELPKGVLARLRERLARADAGQGTDHLFRFAFTGNDVDQPHLSEAVRRFNL+FNILHG Sbjct: 241 IAHELPKGVLARLRERLARADAGQGTDHLFRFAFTGNDVDQPHLSEAVRRFNLDFNILHG 300 Query: 301 QIDEIQGQAFGSLAILANGTQDNINQAMQYLREQGVVVEELNHVI 345 QIDEIQGQAFGSLAILANGTQDNINQAMQYLREQGVVVEELNHVI Sbjct: 301 QIDEIQGQAFGSLAILANGTQDNINQAMQYLREQGVVVEELNHVI 345 >ref|YP_004754369.1| methionine ABC transporter ATP-binding protein [Collimonas fungivorans Ter331] gb|AEK63546.1| Methionine ABC transporter ATP-binding protein [Collimonas fungivorans Ter331] Length = 349 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 293/349 (83%), Positives = 317/349 (90%), Gaps = 4/349 (1%) Query: 1 MIEIQAVTQRF----GNVEAVRNVDLSIRKGEIFGIIGRSGAGKSTLVRTLNLLNRPTSG 56 MIEI+AVTQRF G V+AVRNV LSIRKGEIFGIIGRSGAGKSTLVR LNLLNRPTSG Sbjct: 1 MIEIKAVTQRFNGARGPVDAVRNVSLSIRKGEIFGIIGRSGAGKSTLVRCLNLLNRPTSG 60 Query: 57 RIVLDGQDLTSLSSSQLREARRGIGMIFQHFNLLSSRSVYDNIALPLELAGKSKSEIAAK 116 I++DG+DLT+L + QLR ARR IGMIFQHFNLLSSR+VYDNIALPLELAG SKSEIA K Sbjct: 61 NIIVDGKDLTALDAEQLRGARREIGMIFQHFNLLSSRTVYDNIALPLELAGLSKSEIAKK 120 Query: 117 VEPLLELVGLTALRDRYPAQISGGQKQRVGIARALANDPKVLLSDEATSALDPETTRSIL 176 V PLLELVGLTAL+D YPAQISGGQKQRVGIARALAN+PKVLLSDEATSALDPETTRSIL Sbjct: 121 VTPLLELVGLTALKDSYPAQISGGQKQRVGIARALANEPKVLLSDEATSALDPETTRSIL 180 Query: 177 ELLRKINKELGLTIVLITHQMEVIKQICDRVAVMEAGQVIEQGEVLEVFRQPRHEVTRAL 236 ELLRKIN+ELGLTIVLITHQMEVIK ICDR+AVME+G+VIE GEVLE+FR P+HEVTRAL Sbjct: 181 ELLRKINRELGLTIVLITHQMEVIKMICDRMAVMESGEVIEHGEVLELFRSPKHEVTRAL 240 Query: 237 IGDVIAHELPKGVLARLRERLARADAGQGTDHLFRFAFTGNDVDQPHLSEAVRRFNLNFN 296 IGDVIA ELP+GVL RLR RLA++DAG GTDHLFRFAFTG+ VDQP LSEAVR+F+L+FN Sbjct: 241 IGDVIAQELPQGVLQRLRARLAQSDAGSGTDHLFRFAFTGSGVDQPLLSEAVRKFDLDFN 300 Query: 297 ILHGQIDEIQGQAFGSLAILANGTQDNINQAMQYLREQGVVVEELNHVI 345 ILHGQIDEIQGQAFGSLAILANGT +NI AM YL QGV VEELNHVI Sbjct: 301 ILHGQIDEIQGQAFGSLAILANGTSENIAAAMAYLTAQGVTVEELNHVI 349 >ref|YP_003907831.1| ABC transporter-like protein [Burkholderia sp. CCGE1003] gb|ADN58540.1| ABC transporter related protein [Burkholderia sp. CCGE1003] Length = 344 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 252/348 (72%), Positives = 296/348 (85%), Gaps = 9/348 (2%) Query: 1 MIEIQAVTQRF----GNVEAVRNVDLSIRKGEIFGIIGRSGAGKSTLVRTLNLLNRPTSG 56 MIEI+ ++QRF G VEA+ NV+LSI GE+FGIIGRSGAGKSTLVRT+NLL RPT G Sbjct: 1 MIEIRNISQRFAGPRGWVEALHNVNLSIPAGEVFGIIGRSGAGKSTLVRTINLLTRPTEG 60 Query: 57 RIVLDGQDLTSLSSSQLREARRGIGMIFQHFNLLSSRSVYDNIALPLELAGKSKSEIAAK 116 IV+DG+DLT+L + QLREARR IGMIFQHFNLLSSR+V++N+ALPLELAG + EI A Sbjct: 61 NIVVDGRDLTTLPAPQLREARREIGMIFQHFNLLSSRTVFENVALPLELAGMKRDEIEAN 120 Query: 117 VEPLLELVGLTALRDRYPAQISGGQKQRVGIARALANDPKVLLSDEATSALDPETTRSIL 176 V PLLELVGL+A +DRYPAQISGGQKQRVGIARALA+ PKVLLSDEATSALDPETTR+IL Sbjct: 121 VVPLLELVGLSAQKDRYPAQISGGQKQRVGIARALASKPKVLLSDEATSALDPETTRAIL 180 Query: 177 ELLRKINKELGLTIVLITHQMEVIKQICDRVAVMEAGQVIEQGEVLEVFRQPRHEVTRAL 236 ELL++IN+EL LTIVLITHQM+VIKQ+CDRVAV++AG+V+EQG+V++VF QP HEVTRAL Sbjct: 181 ELLKRINRELNLTIVLITHQMDVIKQVCDRVAVLDAGRVVEQGKVIDVFLQPHHEVTRAL 240 Query: 237 IGDVIAHELPKGVLARLRERLARADAGQGTDHLFRFAFTGNDVDQPHLSEAVRRFNLNFN 296 IGDVIA ELP + AR+ ERL G+ HL R AFTG+ VDQP LSE +RR+ L+FN Sbjct: 241 IGDVIAQELPPAMKARVAERLK-----TGSGHLLRLAFTGSGVDQPILSETIRRYELDFN 295 Query: 297 ILHGQIDEIQGQAFGSLAILANGTQDNINQAMQYLREQGVVVEELNHV 344 ILHGQIDEIQGQAFGSLA+LA G + QA+ YLREQGVVVEEL++V Sbjct: 296 ILHGQIDEIQGQAFGSLAVLAGGEPAKVAQALAYLREQGVVVEELSYV 343 >ref|ZP_02884890.1| ABC transporter related [Burkholderia graminis C4D1M] gb|EDT09684.1| ABC transporter related [Burkholderia graminis C4D1M] Length = 344 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 251/348 (72%), Positives = 297/348 (85%), Gaps = 9/348 (2%) Query: 1 MIEIQAVTQRF----GNVEAVRNVDLSIRKGEIFGIIGRSGAGKSTLVRTLNLLNRPTSG 56 MIEI+ ++QRF G VEA+ NV+LSI GE+FGIIGRSGAGKSTLVRT+NLL RPT G Sbjct: 1 MIEIRNISQRFAGPRGWVEALHNVNLSIPAGEVFGIIGRSGAGKSTLVRTINLLTRPTEG 60 Query: 57 RIVLDGQDLTSLSSSQLREARRGIGMIFQHFNLLSSRSVYDNIALPLELAGKSKSEIAAK 116 IV+DG+DLT+L ++QLREARR IGMIFQHFNLLSSR+V++N+ALPLELAG + EI A Sbjct: 61 NIVVDGRDLTTLPAAQLREARREIGMIFQHFNLLSSRTVFENVALPLELAGMKRDEIEAN 120 Query: 117 VEPLLELVGLTALRDRYPAQISGGQKQRVGIARALANDPKVLLSDEATSALDPETTRSIL 176 V PLLELVGL+A +DRYPAQISGGQKQRVGIARALA+ PKVLLSDEATSALDPETTRSIL Sbjct: 121 VLPLLELVGLSAQKDRYPAQISGGQKQRVGIARALASKPKVLLSDEATSALDPETTRSIL 180 Query: 177 ELLRKINKELGLTIVLITHQMEVIKQICDRVAVMEAGQVIEQGEVLEVFRQPRHEVTRAL 236 +LL++IN+EL LT+VLITHQM+VIKQ+CDRVAV++AG+V+EQG+V++VF QP HEVTRAL Sbjct: 181 DLLKRINRELNLTVVLITHQMDVIKQVCDRVAVLDAGRVVEQGKVIDVFLQPHHEVTRAL 240 Query: 237 IGDVIAHELPKGVLARLRERLARADAGQGTDHLFRFAFTGNDVDQPHLSEAVRRFNLNFN 296 IGDVIA ELP + AR+ ERL G+ HL R AFTG+ VDQP LSE +RR+ L+FN Sbjct: 241 IGDVIAQELPPAMKARVAERLK-----TGSGHLLRLAFTGSGVDQPILSETIRRYELDFN 295 Query: 297 ILHGQIDEIQGQAFGSLAILANGTQDNINQAMQYLREQGVVVEELNHV 344 ILHGQIDEIQGQAFGSLA+LA G + QA+ YLREQGVVVEEL++V Sbjct: 296 ILHGQIDEIQGQAFGSLAVLAGGEPAKVAQALAYLREQGVVVEELSYV 343 >ref|YP_560004.1| ABC methionine transporter, ATPase subunit [Burkholderia xenovorans LB400] sp|Q13VD7|METN1_BURXL RecName: Full=Methionine import ATP-binding protein MetN 1 gb|ABE31952.1| ABC methionine transporter, ATPase subunit [Burkholderia xenovorans LB400] Length = 344 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 252/348 (72%), Positives = 297/348 (85%), Gaps = 9/348 (2%) Query: 1 MIEIQAVTQRF----GNVEAVRNVDLSIRKGEIFGIIGRSGAGKSTLVRTLNLLNRPTSG 56 MIEI+ ++QRF G+VEA+ NV+LSI GE+FGIIGRSGAGKSTLVRT+NLL RP+ G Sbjct: 1 MIEIRNISQRFAGPRGSVEALHNVNLSIPAGEVFGIIGRSGAGKSTLVRTINLLTRPSEG 60 Query: 57 RIVLDGQDLTSLSSSQLREARRGIGMIFQHFNLLSSRSVYDNIALPLELAGKSKSEIAAK 116 IV++G+DLT+L ++QLREARR IGMIFQHFNLLSSR+VY N+ALPLELAG + EI A Sbjct: 61 NIVVNGRDLTTLPAAQLREARREIGMIFQHFNLLSSRTVYGNVALPLELAGMKRDEIEAN 120 Query: 117 VEPLLELVGLTALRDRYPAQISGGQKQRVGIARALANDPKVLLSDEATSALDPETTRSIL 176 V PLLELVGLTA +DRYPAQISGGQKQRVGIARALA+ PKVLLSDEATSALDPETTRSIL Sbjct: 121 VLPLLELVGLTAQKDRYPAQISGGQKQRVGIARALASKPKVLLSDEATSALDPETTRSIL 180 Query: 177 ELLRKINKELGLTIVLITHQMEVIKQICDRVAVMEAGQVIEQGEVLEVFRQPRHEVTRAL 236 +LLR+IN+EL LTIVLITHQM+VIKQ+CDRVAV++AG+V+E+G+V++VF QP HEVTRAL Sbjct: 181 DLLRRINRELNLTIVLITHQMDVIKQVCDRVAVLDAGRVVEEGKVIDVFLQPHHEVTRAL 240 Query: 237 IGDVIAHELPKGVLARLRERLARADAGQGTDHLFRFAFTGNDVDQPHLSEAVRRFNLNFN 296 IGDVIA ELP + AR+ ERL G+ HL R AFTG+ VDQP LSE +RR+ L+FN Sbjct: 241 IGDVIAQELPPAMKARVAERLK-----TGSGHLLRLAFTGSGVDQPILSETIRRYELDFN 295 Query: 297 ILHGQIDEIQGQAFGSLAILANGTQDNINQAMQYLREQGVVVEELNHV 344 ILHGQIDEIQGQAFGSLA+LA G + QA+ YLREQGVVVEEL++V Sbjct: 296 ILHGQIDEIQGQAFGSLAVLAGGEPAKVAQALTYLREQGVVVEELSYV 343