BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2662.p (265 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774417.1| metal ion ABC transporter periplasmic compon... 469 e-130 ref|YP_004754371.1| methionine ABC transporter substrate-binding... 379 e-103 ref|YP_004684669.1| D-methionine-binding lipoprotein MetQ [Cupri... 371 e-101 ref|YP_725328.1| ABC transporter periplasmic protein [Ralstonia ... 371 e-101 ref|YP_002004835.1| d-and l-methionine ABC transporter substrate... 368 e-100 >ref|YP_003774417.1| metal ion ABC transporter periplasmic component/surface antigen protein [Herbaspirillum seropedicae SmR1] emb|CAP19689.1| periplasmic component protein [Herbaspirillum seropedicae] gb|ADJ62509.1| ABC-type metal ion transport system, periplasmic component/surface antigen protein [Herbaspirillum seropedicae SmR1] Length = 265 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 260/265 (98%), Positives = 262/265 (98%) Query: 1 MKRRQLIQFIAGLGLAAGLACAPAMAEDQIKMGVTAGPHAEIMEQVKKLLEKDGVQMKVI 60 MKRRQLIQFIAGLGLAAGL APA A+DQIKMGVTAGPHAEIMEQVKKLLEKDGVQMKVI Sbjct: 1 MKRRQLIQFIAGLGLAAGLVSAPAFAQDQIKMGVTAGPHAEIMEQVKKLLEKDGVQMKVI 60 Query: 61 EFTDYIQPNAALAAGDLDANSYQHQPYLDAQIKDRGYKFVSVGSTITFPMGVYSKKIKSL 120 EFTDYIQPNAALAAGDLDANSYQHQPYLDAQIKDRGYKFVSVGSTITFPMGVYSKKIKSL Sbjct: 61 EFTDYIQPNAALAAGDLDANSYQHQPYLDAQIKDRGYKFVSVGSTITFPMGVYSKKIKSL 120 Query: 121 NDLKQGARVGVPNDPTNGGRALLVLQAKGVIKLKADAGLKATPLDIVENPKKIKIIELDA 180 NDLKQGARVGVPNDPTNGGRALLVLQAKGVIKLKADAGLKATPLDIVENPKKIKI+ELDA Sbjct: 121 NDLKQGARVGVPNDPTNGGRALLVLQAKGVIKLKADAGLKATPLDIVENPKKIKIVELDA 180 Query: 181 AQLPRSLDDFDAAVINGNYAESAGLSPTKDAIAVEASTGPYANVIAVRIADKDKPWVAKL 240 AQLPRSLDDFDAAVINGNYAESAGLSPTKDAIAVEASTGPYANVIAVRIADKDKPWVAKL Sbjct: 181 AQLPRSLDDFDAAVINGNYAESAGLSPTKDAIAVEASTGPYANVIAVRIADKDKPWVAKL 240 Query: 241 VKAYHSPEVKKFVLEKYKGSVITSW 265 VKAYHSPEVKKFVLEKYKGSVITSW Sbjct: 241 VKAYHSPEVKKFVLEKYKGSVITSW 265 >ref|YP_004754371.1| methionine ABC transporter substrate-binding protein [Collimonas fungivorans Ter331] gb|AEK63548.1| Methionine ABC transporter substrate-binding protein [Collimonas fungivorans Ter331] Length = 276 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 206/269 (76%), Positives = 237/269 (88%), Gaps = 4/269 (1%) Query: 1 MKRRQLIQFIAGLGLAAGLACAPAMA----EDQIKMGVTAGPHAEIMEQVKKLLEKDGVQ 56 M RRQL+QF GLGL AGL+ AP A + IK+G T GPHA+I+E VKK+ KDG+ Sbjct: 8 MNRRQLVQFFTGLGLIAGLSAAPVSAVFAQDKPIKIGATGGPHAQILEVVKKVAAKDGLT 67 Query: 57 MKVIEFTDYIQPNAALAAGDLDANSYQHQPYLDAQIKDRGYKFVSVGSTITFPMGVYSKK 116 ++++EF+DYIQPNAALAAGDLDANSYQH PYL+AQIKDRGYK V+VG TITFPMGVYSKK Sbjct: 68 IQIVEFSDYIQPNAALAAGDLDANSYQHLPYLEAQIKDRGYKLVNVGYTITFPMGVYSKK 127 Query: 117 IKSLNDLKQGARVGVPNDPTNGGRALLVLQAKGVIKLKADAGLKATPLDIVENPKKIKII 176 IKSL DLK GARVGVPNDPTNGGRALL+LQA+GV+KLKADAGLKATPLDIV+NPKK+KI+ Sbjct: 128 IKSLKDLKTGARVGVPNDPTNGGRALLLLQAQGVLKLKADAGLKATPLDIVDNPKKLKIV 187 Query: 177 ELDAAQLPRSLDDFDAAVINGNYAESAGLSPTKDAIAVEASTGPYANVIAVRIADKDKPW 236 E+DAAQLPRSLDD DAA INGNYAESAGL PTKD IA+EA+ GPYANVIAVR ADKDKPW Sbjct: 188 EIDAAQLPRSLDDLDAAAINGNYAESAGLDPTKDGIAIEAAKGPYANVIAVRAADKDKPW 247 Query: 237 VAKLVKAYHSPEVKKFVLEKYKGSVITSW 265 VAKLVKAYHSPEVK++V++++K SVI +W Sbjct: 248 VAKLVKAYHSPEVKQYVVDQFKSSVIPAW 276 >ref|YP_004684669.1| D-methionine-binding lipoprotein MetQ [Cupriavidus necator N-1] gb|AEI76188.1| D-methionine-binding lipoprotein MetQ [Cupriavidus necator N-1] Length = 265 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 198/265 (74%), Positives = 228/265 (86%) Query: 1 MKRRQLIQFIAGLGLAAGLACAPAMAEDQIKMGVTAGPHAEIMEQVKKLLEKDGVQMKVI 60 M+RR L+Q+I G + A LA E IK+GVT GPHA+IMEQVKK+ KDG+ ++V+ Sbjct: 1 MQRRNLLQWILGAAIGATLATGAVAQEKPIKIGVTGGPHAQIMEQVKKVAAKDGLNIQVV 60 Query: 61 EFTDYIQPNAALAAGDLDANSYQHQPYLDAQIKDRGYKFVSVGSTITFPMGVYSKKIKSL 120 EF+DYIQPNAALAAGDLDANSYQH PYL+AQIKDRGYKF + T+TFPMGVYSKKIKSL Sbjct: 61 EFSDYIQPNAALAAGDLDANSYQHLPYLEAQIKDRGYKFTHIAYTVTFPMGVYSKKIKSL 120 Query: 121 NDLKQGARVGVPNDPTNGGRALLVLQAKGVIKLKADAGLKATPLDIVENPKKIKIIELDA 180 + LKQGARVGVPNDPTNGGR LL+LQ+KGVIKLK +AGLKATPLDIVENPKKI+I+ELDA Sbjct: 121 DQLKQGARVGVPNDPTNGGRGLLLLQSKGVIKLKPNAGLKATPLDIVENPKKIRIVELDA 180 Query: 181 AQLPRSLDDFDAAVINGNYAESAGLSPTKDAIAVEASTGPYANVIAVRIADKDKPWVAKL 240 AQLPRSLDD DAA INGNYAESAGLSP KDAIA+E GPYAN+IA+R ADK+KPWVAKL Sbjct: 181 AQLPRSLDDLDAAAINGNYAESAGLSPVKDAIAIEGPKGPYANLIAIREADKNKPWVAKL 240 Query: 241 VKAYHSPEVKKFVLEKYKGSVITSW 265 VKAYHSPE+K++V +K SVIT+W Sbjct: 241 VKAYHSPEIKQYVTSTFKDSVITAW 265 >ref|YP_725328.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] emb|CAJ91960.1| ABC-type transporter, periplasmic component: MUTfamily [Ralstonia eutropha H16] Length = 265 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 198/265 (74%), Positives = 226/265 (85%) Query: 1 MKRRQLIQFIAGLGLAAGLACAPAMAEDQIKMGVTAGPHAEIMEQVKKLLEKDGVQMKVI 60 M+RR L+Q+I G + A LA E IK+GVT GPHA+IMEQVKK+ KDG+ + V+ Sbjct: 1 MQRRNLLQWILGAAIGATLATGAVAQEKPIKIGVTGGPHAQIMEQVKKVAAKDGLNIHVV 60 Query: 61 EFTDYIQPNAALAAGDLDANSYQHQPYLDAQIKDRGYKFVSVGSTITFPMGVYSKKIKSL 120 EF+DYIQPNAALAAGDLDANSYQH PYL+AQIKDRGYKF + T+TFPMGVYSKKIKSL Sbjct: 61 EFSDYIQPNAALAAGDLDANSYQHLPYLEAQIKDRGYKFTHIAYTVTFPMGVYSKKIKSL 120 Query: 121 NDLKQGARVGVPNDPTNGGRALLVLQAKGVIKLKADAGLKATPLDIVENPKKIKIIELDA 180 + LKQGARVGVPNDPTNGGR LL+LQ+KGVIKLK +AGLKATPLDIVENPKKI+I+ELDA Sbjct: 121 DQLKQGARVGVPNDPTNGGRGLLLLQSKGVIKLKPNAGLKATPLDIVENPKKIRIVELDA 180 Query: 181 AQLPRSLDDFDAAVINGNYAESAGLSPTKDAIAVEASTGPYANVIAVRIADKDKPWVAKL 240 AQLPRSLDD DAA INGNYAESAGLSP KDAIA+E GPYAN+IA+R ADK KPWVAKL Sbjct: 181 AQLPRSLDDLDAAAINGNYAESAGLSPVKDAIAIEGPKGPYANLIAIREADKSKPWVAKL 240 Query: 241 VKAYHSPEVKKFVLEKYKGSVITSW 265 VKAYHSPE+K++V +K SVIT+W Sbjct: 241 VKAYHSPEIKQYVTSTFKDSVITAW 265 >ref|YP_002004835.1| d-and l-methionine ABC transporter substrate-binding protein [Cupriavidus taiwanensis LMG 19424] emb|CAQ68766.1| D-and L-methionine ABC transporter, periplasmic component [Cupriavidus taiwanensis LMG 19424] Length = 265 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 195/265 (73%), Positives = 227/265 (85%) Query: 1 MKRRQLIQFIAGLGLAAGLACAPAMAEDQIKMGVTAGPHAEIMEQVKKLLEKDGVQMKVI 60 M+RR L+Q++ G L A LA + I++GVT GPHA+IMEQVKK+ +DG+ ++V+ Sbjct: 1 MQRRNLLQWMLGAALGASLATGAIAQDKPIRIGVTGGPHAQIMEQVKKVAARDGLNIQVV 60 Query: 61 EFTDYIQPNAALAAGDLDANSYQHQPYLDAQIKDRGYKFVSVGSTITFPMGVYSKKIKSL 120 EF+DYIQPNAALAAGDLDANSYQH PYL+AQIKDRGYKF + T+TFPMGVYSKKIKSL Sbjct: 61 EFSDYIQPNAALAAGDLDANSYQHLPYLEAQIKDRGYKFTHIAYTVTFPMGVYSKKIKSL 120 Query: 121 NDLKQGARVGVPNDPTNGGRALLVLQAKGVIKLKADAGLKATPLDIVENPKKIKIIELDA 180 + LKQGARVGVPNDPTNGGR LL+LQ+KGVIKLK +AGLKATPLDI ENPKKI+I+ELDA Sbjct: 121 DQLKQGARVGVPNDPTNGGRGLLLLQSKGVIKLKPNAGLKATPLDIAENPKKIRIVELDA 180 Query: 181 AQLPRSLDDFDAAVINGNYAESAGLSPTKDAIAVEASTGPYANVIAVRIADKDKPWVAKL 240 AQLPRSLDD DAA INGNYAESAGLSPTKDAIA+E GPYAN+IA+R ADK KPWVAKL Sbjct: 181 AQLPRSLDDLDAAAINGNYAESAGLSPTKDAIAMEGPKGPYANLIAIREADKGKPWVAKL 240 Query: 241 VKAYHSPEVKKFVLEKYKGSVITSW 265 VKAYHSPE+K++V +K SVIT+W Sbjct: 241 VKAYHSPEIKQYVTSTFKDSVITAW 265