BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2645.p (413 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774402.1| fosmidomycin resistance protein [Herbaspiril... 576 e-162 ref|ZP_07775761.1| fosmidomycin resistance protein [Pseudomonas ... 499 e-139 ref|YP_002873013.1| putative fosmidomycin resistance protein [Ps... 496 e-138 ref|YP_350485.1| major facilitator transporter [Pseudomonas fluo... 476 e-132 gb|ADX60323.1| fosmidomycin resistance protein [Pseudomonas fluo... 476 e-132 >ref|YP_003774402.1| fosmidomycin resistance protein [Herbaspirillum seropedicae SmR1] gb|ADJ62494.1| fosmidomycin resistance protein [Herbaspirillum seropedicae SmR1] Length = 413 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 362/412 (87%), Positives = 386/412 (93%) Query: 1 MTSATDSNATLPSGATASTDSPAAIAAQPLVMSIILACGGAHLINDMIQALLPSIYPMLK 60 MTSAT+S A PS AT +SPA +AAQPLVMSIILACGGAHLINDMIQALLPSIYPMLK Sbjct: 1 MTSATNSTAAAPSSATTPANSPAGLAAQPLVMSIILACGGAHLINDMIQALLPSIYPMLK 60 Query: 61 TGYGLTFTQVGLITLTFQVTASLLQPWIGMYTDRHPQPWLLPTGAVATLVGIVLLALAGS 120 T YGL+FTQVGLITLTFQVTASLLQPWIGMYTDRHPQPWLLP+GAVATLVGIVLL++AGS Sbjct: 61 TSYGLSFTQVGLITLTFQVTASLLQPWIGMYTDRHPQPWLLPSGAVATLVGIVLLSMAGS 120 Query: 121 FTAFLLAAALIGIGSSTFHPEASRIARMASGGRFGLAQSTFQVGGNAGSAFGPLLAAAIV 180 F AFLLAAAL+GIGSSTFHPEASRIARMASGGRFGLAQSTFQVGGNAGSAFGPLLAAAIV Sbjct: 121 FPAFLLAAALVGIGSSTFHPEASRIARMASGGRFGLAQSTFQVGGNAGSAFGPLLAAAIV 180 Query: 181 VPYGQGNVAWFVLLSVLAIVVLSRVSIWYRHHLAAGAKKARATVHHHLSSGTVKKALLVL 240 VP+GQ NVAWFVLL++L+I+VL+RVS WYR HLAA + + H L + TV++AL+VL Sbjct: 181 VPFGQANVAWFVLLALLSILVLTRVSGWYRSHLAATKGRTKPRATHSLPAATVRRALVVL 240 Query: 241 ALLVFSKYFYMASFTSYFTFYLIERFQMSVASSQLYLFLFLGAVAVGTFVGGPIGDRIGR 300 ALLVFSKYFYMASFTSYFTFYLI+RF +SVASSQLYLFLFLGAVAVGTFVGGPIGDRIGR Sbjct: 241 ALLVFSKYFYMASFTSYFTFYLIDRFHLSVASSQLYLFLFLGAVAVGTFVGGPIGDRIGR 300 Query: 301 KLVIWISILGAAPFALMLPHANLFWTAVLSVVIGLVISSAFAAIVVYAQELVPGKVGMIA 360 KLVIWISILGAAPFALMLPHANLFWTAVLSVVIGLVISSAF+AIVVYAQELVPGKVGMIA Sbjct: 301 KLVIWISILGAAPFALMLPHANLFWTAVLSVVIGLVISSAFSAIVVYAQELVPGKVGMIA 360 Query: 361 GVFFGLMFGFGGIGAALLGHLADLYGIAWVYGLCAFLPLAGVLTVLLPDVRE 412 GVFFGLMFGFGGIGAALLGHLADLYGIAWVYGLCAFLPLAG+LTV LPDVRE Sbjct: 361 GVFFGLMFGFGGIGAALLGHLADLYGIAWVYGLCAFLPLAGILTVFLPDVRE 412 >ref|ZP_07775761.1| fosmidomycin resistance protein [Pseudomonas fluorescens WH6] gb|EFQ63490.1| fosmidomycin resistance protein [Pseudomonas fluorescens WH6] Length = 403 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 289/403 (71%), Positives = 333/403 (82%), Gaps = 3/403 (0%) Query: 9 ATLPSGATASTDSPAAIAAQPLVMSIILACGGAHLINDMIQALLPSIYPMLKTGYGLTFT 68 +TL + A+T +P PLVM I+ AC AHLIND+IQA+LPSIYPMLK YGLTFT Sbjct: 2 STLTASPAAATSTPHV---SPLVMRILGACALAHLINDLIQAVLPSIYPMLKANYGLTFT 58 Query: 69 QVGLITLTFQVTASLLQPWIGMYTDRHPQPWLLPTGAVATLVGIVLLALAGSFTAFLLAA 128 QVG+ITLTFQ+TASLLQPWIG +TDRHP+PWLLP G V TLVGI++LA G+F A LLAA Sbjct: 59 QVGMITLTFQLTASLLQPWIGYHTDRHPKPWLLPAGMVCTLVGILMLAFVGTFPAILLAA 118 Query: 129 ALIGIGSSTFHPEASRIARMASGGRFGLAQSTFQVGGNAGSAFGPLLAAAIVVPYGQGNV 188 L+G+GSSTFHPE SR+AR+ASGGR+GLAQSTFQVGGN GSA GPLLAAAI++PYGQGN+ Sbjct: 119 GLVGVGSSTFHPETSRVARLASGGRYGLAQSTFQVGGNTGSALGPLLAAAIIIPYGQGNI 178 Query: 189 AWFVLLSVLAIVVLSRVSIWYRHHLAAGAKKARATVHHHLSSGTVKKALLVLALLVFSKY 248 AWF L +V AI+VL +S WYR+HL K H LS G V AL+VLA+LVFSKY Sbjct: 179 AWFGLFAVFAILVLYGLSRWYRNHLNLFKLKQGGKATHGLSKGRVTFALVVLAVLVFSKY 238 Query: 249 FYMASFTSYFTFYLIERFQMSVASSQLYLFLFLGAVAVGTFVGGPIGDRIGRKLVIWISI 308 FYM+S TSYFTFYLIE+F +SVASSQLYLFLFLGAVA GTF GGPIGDRIGRK VIW SI Sbjct: 239 FYMSSLTSYFTFYLIEKFSLSVASSQLYLFLFLGAVAAGTFFGGPIGDRIGRKKVIWFSI 298 Query: 309 LGAAPFALMLPHANLFWTAVLSVVIGLVISSAFAAIVVYAQELVPGKVGMIAGVFFGLMF 368 LGAAPF L LP+ +LFWTAVLSVVIG +++SAF+AIVV+AQELVPG VGMIAGVFFGLMF Sbjct: 299 LGAAPFTLALPYVDLFWTAVLSVVIGFILASAFSAIVVFAQELVPGNVGMIAGVFFGLMF 358 Query: 369 GFGGIGAALLGHLADLYGIAWVYGLCAFLPLAGVLTVLLPDVR 411 GF GIGAALLG LAD +GI +VY LC+FLPL G+LT+LLP + Sbjct: 359 GFSGIGAALLGLLADNHGIEYVYKLCSFLPLVGILTILLPSTK 401 >ref|YP_002873013.1| putative fosmidomycin resistance protein [Pseudomonas fluorescens SBW25] emb|CAY49670.1| putative fosmidomycin resistance protein [Pseudomonas fluorescens SBW25] Length = 403 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 281/383 (73%), Positives = 325/383 (84%) Query: 29 PLVMSIILACGGAHLINDMIQALLPSIYPMLKTGYGLTFTQVGLITLTFQVTASLLQPWI 88 PLVM I+ AC AHLIND+IQA+LPSIYPMLK YGL+FTQVGLITLTFQ+TASLLQPWI Sbjct: 19 PLVMRILGACALAHLINDLIQAVLPSIYPMLKANYGLSFTQVGLITLTFQLTASLLQPWI 78 Query: 89 GMYTDRHPQPWLLPTGAVATLVGIVLLALAGSFTAFLLAAALIGIGSSTFHPEASRIARM 148 G +TDRHP+PWLLP G V TL+GI++LA G+F A LLAA L+G+GSSTFHPE SR+AR+ Sbjct: 79 GYHTDRHPKPWLLPAGMVCTLIGILMLAFVGNFPAILLAAGLVGVGSSTFHPETSRVARL 138 Query: 149 ASGGRFGLAQSTFQVGGNAGSAFGPLLAAAIVVPYGQGNVAWFVLLSVLAIVVLSRVSIW 208 ASGGR+GLAQSTFQVGGN GSA GPLLAAAI++PYGQG++AWF L +V AI+VL +S W Sbjct: 139 ASGGRYGLAQSTFQVGGNTGSALGPLLAAAIIIPYGQGHIAWFGLFAVFAILVLYGLSRW 198 Query: 209 YRHHLAAGAKKARATVHHHLSSGTVKKALLVLALLVFSKYFYMASFTSYFTFYLIERFQM 268 YR+HL K H LS G V AL+VLA+LVFSKY+YM S TSYFTFYLIE+FQ+ Sbjct: 199 YRNHLNLFKLKQGGKATHGLSKGRVTFALVVLAVLVFSKYWYMTSLTSYFTFYLIEKFQL 258 Query: 269 SVASSQLYLFLFLGAVAVGTFVGGPIGDRIGRKLVIWISILGAAPFALMLPHANLFWTAV 328 SV+SSQ+YLFLFLGAVAVGTF GGPIGD+IGRK VIW SILGAAPF L LP+ +LFWTAV Sbjct: 259 SVSSSQMYLFLFLGAVAVGTFAGGPIGDKIGRKKVIWFSILGAAPFTLALPYVDLFWTAV 318 Query: 329 LSVVIGLVISSAFAAIVVYAQELVPGKVGMIAGVFFGLMFGFGGIGAALLGHLADLYGIA 388 LSVVIG +I+SAF+AIVV+AQELVPG VGMIAG+FFGLMFGF GIGAALLG LAD +GI Sbjct: 319 LSVVIGFIIASAFSAIVVFAQELVPGNVGMIAGIFFGLMFGFSGIGAALLGLLADTHGIE 378 Query: 389 WVYGLCAFLPLAGVLTVLLPDVR 411 +VY LC+FLPL G+LTVLLP + Sbjct: 379 YVYKLCSFLPLVGILTVLLPSTK 401 >ref|YP_350485.1| major facilitator transporter [Pseudomonas fluorescens Pf0-1] gb|ABA76494.1| putative fosmidomycin resistance protein [Pseudomonas fluorescens Pf0-1] Length = 405 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 288/383 (75%), Positives = 329/383 (85%) Query: 30 LVMSIILACGGAHLINDMIQALLPSIYPMLKTGYGLTFTQVGLITLTFQVTASLLQPWIG 89 LVM II A AHLIND+IQ++LPSIYPMLK YGL+FTQVGLITLTFQ+TASLLQPW+G Sbjct: 22 LVMRIIGAVALAHLINDLIQSVLPSIYPMLKANYGLSFTQVGLITLTFQLTASLLQPWVG 81 Query: 90 MYTDRHPQPWLLPTGAVATLVGIVLLALAGSFTAFLLAAALIGIGSSTFHPEASRIARMA 149 +TDRHP+PWLLP G+V TL+GIV++++ GSF LLAAALIGIGSSTFHPEASRIAR+A Sbjct: 82 YHTDRHPKPWLLPAGSVCTLIGIVMMSMVGSFPLILLAAALIGIGSSTFHPEASRIARLA 141 Query: 150 SGGRFGLAQSTFQVGGNAGSAFGPLLAAAIVVPYGQGNVAWFVLLSVLAIVVLSRVSIWY 209 SGGRFGLAQSTFQVGGNAGSAFGPLLAAAI++P+GQGNVAWF L +V A+ VL R+S WY Sbjct: 142 SGGRFGLAQSTFQVGGNAGSAFGPLLAAAIIIPFGQGNVAWFGLFAVFALFVLYRISRWY 201 Query: 210 RHHLAAGAKKARATVHHHLSSGTVKKALLVLALLVFSKYFYMASFTSYFTFYLIERFQMS 269 HHL KA H LS G V AL+VL LLVFSKYFYMAS TSYFTFYLIE+F +S Sbjct: 202 AHHLNLFKLKAGQAATHGLSKGRVISALVVLGLLVFSKYFYMASLTSYFTFYLIEKFDLS 261 Query: 270 VASSQLYLFLFLGAVAVGTFVGGPIGDRIGRKLVIWISILGAAPFALMLPHANLFWTAVL 329 VASSQL+LFLFLGAVA GTF GGPIGD+IGRK VIW SILG APF L++PH +LFWT+VL Sbjct: 262 VASSQLHLFLFLGAVAAGTFFGGPIGDKIGRKAVIWFSILGVAPFTLLMPHVDLFWTSVL 321 Query: 330 SVVIGLVISSAFAAIVVYAQELVPGKVGMIAGVFFGLMFGFGGIGAALLGHLADLYGIAW 389 SVVIG +++SAF+AIVVYAQELVPG VGMIAGVFFGLMFGFGGIGAALLGHLAD++GI + Sbjct: 322 SVVIGFILASAFSAIVVYAQELVPGNVGMIAGVFFGLMFGFGGIGAALLGHLADIHGIEY 381 Query: 390 VYGLCAFLPLAGVLTVLLPDVRE 412 VY LC+FLPL GVLT+ LP ++ Sbjct: 382 VYFLCSFLPLFGVLTIFLPRTKK 404 >gb|ADX60323.1| fosmidomycin resistance protein [Pseudomonas fluorescens] Length = 405 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 287/392 (73%), Positives = 330/392 (84%) Query: 21 SPAAIAAQPLVMSIILACGGAHLINDMIQALLPSIYPMLKTGYGLTFTQVGLITLTFQVT 80 +PAA PLVM +I A AHLIND+IQ++LPSIYPMLK YGLTFTQVGLITLTFQ+T Sbjct: 13 TPAAGQTSPLVMRVIGAVALAHLINDLIQSVLPSIYPMLKANYGLTFTQVGLITLTFQLT 72 Query: 81 ASLLQPWIGMYTDRHPQPWLLPTGAVATLVGIVLLALAGSFTAFLLAAALIGIGSSTFHP 140 ASLLQPW+G YTDRHP+P+LLP G + TLVGI++++ GSF LLAA LIGIGSSTFHP Sbjct: 73 ASLLQPWVGYYTDRHPKPYLLPCGMICTLVGILMMSQVGSFPLILLAAGLIGIGSSTFHP 132 Query: 141 EASRIARMASGGRFGLAQSTFQVGGNAGSAFGPLLAAAIVVPYGQGNVAWFVLLSVLAIV 200 EASR+AR+ASGGR+GLAQSTFQVGGNAGSAFGPLLAAAI++P+GQGNVAWF L +V A+ Sbjct: 133 EASRVARLASGGRYGLAQSTFQVGGNAGSAFGPLLAAAIIIPFGQGNVAWFGLFAVFALF 192 Query: 201 VLSRVSIWYRHHLAAGAKKARATVHHHLSSGTVKKALLVLALLVFSKYFYMASFTSYFTF 260 VL +S WY HHL K H LS G V AL+VL LLVFSKYFYMASFTSYFTF Sbjct: 193 VLYAISRWYAHHLNLFKLKQGQAATHGLSKGRVLSALVVLGLLVFSKYFYMASFTSYFTF 252 Query: 261 YLIERFQMSVASSQLYLFLFLGAVAVGTFVGGPIGDRIGRKLVIWISILGAAPFALMLPH 320 YLIE+F +SVASSQL+LFLFLGAVA GTF GGPIGD+IGRK VIW SILG APF L+LPH Sbjct: 253 YLIEKFDLSVASSQLHLFLFLGAVAAGTFFGGPIGDKIGRKAVIWFSILGVAPFTLLLPH 312 Query: 321 ANLFWTAVLSVVIGLVISSAFAAIVVYAQELVPGKVGMIAGVFFGLMFGFGGIGAALLGH 380 +LFWT++LSVVIG +++SAF+AIVVYAQELVPG VGMIAGVFFGLMFGFGGIGAALLGH Sbjct: 313 VDLFWTSILSVVIGFILASAFSAIVVYAQELVPGNVGMIAGVFFGLMFGFGGIGAALLGH 372 Query: 381 LADLYGIAWVYGLCAFLPLAGVLTVLLPDVRE 412 LAD++GI +VY LC+FLPL GVL +LLP ++ Sbjct: 373 LADIHGIEYVYTLCSFLPLFGVLAILLPRTKK 404