BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2641.p (427 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003911006.1| monooxygenase FAD-binding protein [Burkholde... 552 e-155 ref|YP_004685742.1| flavoprotein involved in K+ transport [Cupri... 548 e-154 ref|YP_001860725.1| FAD dependent oxidoreductase [Burkholderia p... 547 e-153 ref|YP_726420.1| K+ transport flavoprotein [Ralstonia eutropha H... 547 e-153 ref|ZP_02925007.1| hypothetical protein VspiD_00155 [Verrucomicr... 546 e-153 >ref|YP_003911006.1| monooxygenase FAD-binding protein [Burkholderia sp. CCGE1003] gb|ADN61715.1| monooxygenase FAD-binding protein [Burkholderia sp. CCGE1003] Length = 429 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 264/398 (66%), Positives = 307/398 (77%), Gaps = 2/398 (0%) Query: 11 HHSVIIIGGGQAGLSISWYLKQAGIDHLVLEKHQVGHAWRHERWDTFCLVTPNWQCNLPG 70 HH+VI++GGGQAGLSIS+YLK+AGIDHLV+EKH + H WR +RWD FCLVTPNWQC LPG Sbjct: 17 HHTVIVVGGGQAGLSISYYLKEAGIDHLVIEKHTLTHTWRSQRWDAFCLVTPNWQCALPG 76 Query: 71 YPYRGDDPYGFMKKDEIVAYLDGFVASFQPPVREGVTVEKLWRAGAR-WHLSASDGAYTA 129 YPYRGDDP+GFMKKDEIVAYLDGF+A PV E V K+ R A + +S S+G +TA Sbjct: 77 YPYRGDDPHGFMKKDEIVAYLDGFIAMVDAPVLEHTEVRKVRRLPAGGYFVSTSNGDFTA 136 Query: 130 DQVVVAVGGYHIPVVPRAAERLPADIVQIHSSQYLNPQSLPEGEVLVVGTGQSGCQIAED 189 DQVVVA GGYH P+VPR AERLPA IVQ+ SS Y NP++LP+G VLVVG+GQSG QIAED Sbjct: 137 DQVVVASGGYHTPIVPRMAERLPAGIVQMQSSHYRNPEALPKGAVLVVGSGQSGAQIAED 196 Query: 190 LHLAGRRVHLGVGEAPRVARTYRGKDVVEWLDKMKYYDLPVDQHPLGTGVREKTNHYVTG 249 LHLAGR+V+L VGEAPR AR YRG+DVV+WL M+YYD+PVDQHPL GVR+ TNHYVTG Sbjct: 197 LHLAGRKVYLAVGEAPRCARFYRGRDVVDWLADMRYYDMPVDQHPLREGVRDNTNHYVTG 256 Query: 250 RDGGRDIDLRKFALEGMQLYGKFDTLEGEVVRFGGGLKGYLDEADAVSESIKDSIDKFIA 309 RDGGRDIDLR+FALEGM+LYG+ D L + F L LD AD I SID FI Sbjct: 257 RDGGRDIDLRRFALEGMELYGRLDDLRDGRLHFAPNLTSNLDSADDTYNRINASIDAFID 316 Query: 310 AQQIEAPTEARYVPVWQPPAEEVSTLDLRARGISAVVWCIGFRTDFSWIAEPIFDGRGYP 369 I+AP Y PVW P E S LDL GI++++WCIGFR DFSWI P+F+GRGYP Sbjct: 317 KHGIDAPQGVPYKPVWSPQGERTS-LDLAQSGIASIIWCIGFRPDFSWIDAPVFNGRGYP 375 Query: 370 GHVRGVTAAPGLYFLGLPWQYTWGSGRFSGIDRDARHL 407 H RG+T GLYF+GLPW +TWGSGRFSGI RDA H+ Sbjct: 376 AHNRGITPQAGLYFIGLPWLHTWGSGRFSGIARDAEHV 413 >ref|YP_004685742.1| flavoprotein involved in K+ transport [Cupriavidus necator N-1] gb|AEI77261.1| flavoprotein involved in K+ transport [Cupriavidus necator N-1] Length = 428 Score = 548 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 275/419 (65%), Positives = 322/419 (76%), Gaps = 7/419 (1%) Query: 10 RHHSVIIIGGGQAGLSISWYLKQAGIDHLVLEKHQVGHAWRHERWDTFCLVTPNWQCNLP 69 RH+ VII+GGGQAGLS+S++LKQAGIDHL++EKH V HAWR +RWD FCLVTPNWQC LP Sbjct: 16 RHYGVIIVGGGQAGLSMSYFLKQAGIDHLLIEKHTVTHAWRTQRWDAFCLVTPNWQCALP 75 Query: 70 GYPYRGDDPYGFMKKDEIVAYLDGFVASFQPPVREGVTVEKL-WRAGARWHLSASDGAYT 128 GYPY+GDDP+GFMKKDEI AYLDGF+ + PV E V ++ RA + + S GA+T Sbjct: 76 GYPYQGDDPHGFMKKDEITAYLDGFIRTVGAPVLEHTEVRQVKARAQGGFSVVTSQGAFT 135 Query: 129 ADQVVVAVGGYHIPVVPRAAERLPADIVQIHSSQYLNPQSLPEGEVLVVGTGQSGCQIAE 188 ADQVVVA GGYH P+VPR AERLP I Q+ SS+Y NP SLPEG VLVVG+GQSG QIAE Sbjct: 136 ADQVVVASGGYHTPIVPRMAERLPTSIRQLQSSEYRNPGSLPEGAVLVVGSGQSGAQIAE 195 Query: 189 DLHLAGRRVHLGVGEAPRVARTYRGKDVVEWLDKMKYYDLPVDQHPLGTGVREKTNHYVT 248 DLHL GR+V+L VGEAPR AR YRG+DVV+WL MKYYDLPV +HPL GVR+ TNHYVT Sbjct: 196 DLHLGGRKVYLAVGEAPRCARFYRGRDVVDWLADMKYYDLPVTEHPLREGVRDNTNHYVT 255 Query: 249 GRDGGRDIDLRKFALEGMQLYGKFDTLEGEVVRFGGGLKGYLDEADAVSESIKDSIDKFI 308 GRDGGRDIDLRKFA EGM+LYG +RF L+ LD+ADA I SIDKFI Sbjct: 256 GRDGGRDIDLRKFATEGMELYGVLGDYRDGQLRFAADLRHNLDDADATYNRINASIDKFI 315 Query: 309 AAQQIEAPTEARYVPVWQPPAEEVSTLDLRARGISAVVWCIGFRTDFSWIAEPIFDGRGY 368 A + IEAP + Y PVW PPAE + LD +A GI +++WCIGFR DFSW+ P+F+GRGY Sbjct: 316 AERGIEAPPPSVYEPVWTPPAER-TELDPQAAGIGSIIWCIGFRPDFSWLEVPVFNGRGY 374 Query: 369 PGHVRGVTAAPGLYFLGLPWQYTWGSGRFSGIDRDARHLFEHISGLRAQAGQPDLSQAA 427 PGH RGVTA GLYFLGLPW +TWGSGRFSGI RDA E+++GL A AG+ D + AA Sbjct: 375 PGHQRGVTAHAGLYFLGLPWLHTWGSGRFSGIARDA----EYLAGLIA-AGESDTALAA 428 >ref|YP_001860725.1| FAD dependent oxidoreductase [Burkholderia phymatum STM815] gb|ACC73679.1| FAD dependent oxidoreductase [Burkholderia phymatum STM815] Length = 430 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 266/418 (63%), Positives = 311/418 (74%), Gaps = 5/418 (1%) Query: 11 HHSVIIIGGGQAGLSISWYLKQAGIDHLVLEKHQVGHAWRHERWDTFCLVTPNWQCNLPG 70 HH+VI++GGGQAGLSIS+YLK+AGIDHLVLEKH V H WR +RWD FCLVTPNWQC LPG Sbjct: 17 HHTVIVVGGGQAGLSISYYLKEAGIDHLVLEKHTVTHTWRSQRWDAFCLVTPNWQCALPG 76 Query: 71 YPYRGDDPYGFMKKDEIVAYLDGFVASFQPPVREGVTVEKLWRA-GARWHLSASDGAYTA 129 +PYRGDDP+GFMKKDEI+AYLDGF+A PV E V K+ R + +S S+G +TA Sbjct: 77 HPYRGDDPHGFMKKDEIIAYLDGFIAMVDAPVLEHTEVRKVRRVPSGGYFVSTSNGDFTA 136 Query: 130 DQVVVAVGGYHIPVVPRAAERLPADIVQIHSSQYLNPQSLPEGEVLVVGTGQSGCQIAED 189 DQVVVA GGYH P+VPR AERLPA I+Q+ SS Y NPQ+LPEG VLVVG+GQSG QIAED Sbjct: 137 DQVVVASGGYHTPIVPRMAERLPAGILQLQSSHYRNPQALPEGAVLVVGSGQSGAQIAED 196 Query: 190 LHLAGRRVHLGVGEAPRVARTYRGKDVVEWLDKMKYYDLPVDQHPLGTGVREKTNHYVTG 249 LHLAGR+V L VG+APR AR YR +DVV+WL M+YYD+PVDQHPL GVR+ TNHYVTG Sbjct: 197 LHLAGRKVFLAVGDAPRCARFYRDRDVVDWLADMRYYDMPVDQHPLREGVRDNTNHYVTG 256 Query: 250 RDGGRDIDLRKFALEGMQLYGKFDTLEGEVVRFGGGLKGYLDEADAVSESIKDSIDKFIA 309 RDGGRDIDLR+FALEGM+LYG+ D + F L G LD AD I SID FI Sbjct: 257 RDGGRDIDLRRFALEGMELYGRLDDFRDGCLHFAPNLTGSLDSADDTYNRINASIDAFID 316 Query: 310 AQQIEAPTEARYVPVWQPPAEEVSTLDLRARGISAVVWCIGFRTDFSWIAEPIFDGRGYP 369 Q I+AP Y PVW+P E S LDL GI++++WCIGF DF WI P+F+GRGYP Sbjct: 317 KQGIDAPQGVPYEPVWRPHGERTS-LDLAQSGIASIIWCIGFTPDFGWIDAPVFNGRGYP 375 Query: 370 GHVRGVTAAPGLYFLGLPWQYTWGSGRFSGIDRDARHLFEHISGLRAQAGQPDLSQAA 427 H RG+T GLYF+GLPW +TWGSGRFSGI RDA H+ + +R Q S AA Sbjct: 376 AHNRGITPQAGLYFIGLPWLHTWGSGRFSGIARDAEHI---VGAIRLALDQTSTSLAA 430 >ref|YP_726420.1| K+ transport flavoprotein [Ralstonia eutropha H16] emb|CAJ93052.1| predicted flavoprotein involved in K+ transport [Ralstonia eutropha H16] Length = 428 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 275/420 (65%), Positives = 325/420 (77%), Gaps = 9/420 (2%) Query: 10 RHHSVIIIGGGQAGLSISWYLKQAGIDHLVLEKHQVGHAWRHERWDTFCLVTPNWQCNLP 69 RH+ VII+GGGQAGLS+S++LKQAGIDHL++EKH V H WR +RWD FCLVTPNWQC LP Sbjct: 16 RHYGVIIVGGGQAGLSMSYFLKQAGIDHLIIEKHTVTHTWRTQRWDAFCLVTPNWQCALP 75 Query: 70 GYPYRGDDPYGFMKKDEIVAYLDGFVASFQPPVREGVTVEKL-WRAGARWHLSASDGAYT 128 GYPY+GDDP+GFMKKDEI AYLDGF+ + PV E V ++ RA + + S GA+T Sbjct: 76 GYPYQGDDPHGFMKKDEITAYLDGFIRTVGAPVLEHTEVRQVKARAQGGFAVVTSQGAFT 135 Query: 129 ADQVVVAVGGYHIPVVPRAAERLPADIVQIHSSQYLNPQSLPEGEVLVVGTGQSGCQIAE 188 ADQVVVA GGYH P+VPR AERLPA + Q+ SS+Y NP+SLPEG VLVVG+GQSG QIAE Sbjct: 136 ADQVVVASGGYHTPIVPRMAERLPASVRQLQSSEYRNPESLPEGAVLVVGSGQSGAQIAE 195 Query: 189 DLHLAGRRVHLGVGEAPRVARTYRGKDVVEWLDKMKYYDLPVDQHPLGTGVREKTNHYVT 248 DLHLAGR+V+L VGEAPR AR YRG+DVV+WL MKYYDLPV +HPL GVR+ TNHYVT Sbjct: 196 DLHLAGRKVYLAVGEAPRCARFYRGRDVVDWLADMKYYDLPVTEHPLREGVRDNTNHYVT 255 Query: 249 GRDGGRDIDLRKFALEGMQLYGKFDT-LEGEVVRFGGGLKGYLDEADAVSESIKDSIDKF 307 GRDGGRDIDLR+FA EGM+LYG D LEG+ +RF L+ LD+ADA I SIDKF Sbjct: 256 GRDGGRDIDLRRFATEGMELYGLLDDYLEGQ-LRFAPDLRRNLDDADATYNRINASIDKF 314 Query: 308 IAAQQIEAPTEARYVPVWQPPAEEVSTLDLRARGISAVVWCIGFRTDFSWIAEPIFDGRG 367 IA + IEA + Y PVW PPAE + LD +A GI +++WCIGFR DFSW+ P+F+GRG Sbjct: 315 IAERGIEASPPSVYEPVWTPPAER-TELDPQAAGIGSIIWCIGFRPDFSWLEVPVFNGRG 373 Query: 368 YPGHVRGVTAAPGLYFLGLPWQYTWGSGRFSGIDRDARHLFEHISGLRAQAGQPDLSQAA 427 YPGH RGVTA GLYFLGLPW +TWGSGRFSGI RDA +L I+ AG+ D + AA Sbjct: 374 YPGHERGVTAHAGLYFLGLPWLHTWGSGRFSGIARDAEYLAALIA-----AGRGDTALAA 428 >ref|ZP_02925007.1| hypothetical protein VspiD_00155 [Verrucomicrobium spinosum DSM 4136] Length = 430 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 256/398 (64%), Positives = 311/398 (78%), Gaps = 2/398 (0%) Query: 11 HHSVIIIGGGQAGLSISWYLKQAGIDHLVLEKHQVGHAWRHERWDTFCLVTPNWQCNLPG 70 H+ VIIIGGGQAGLS+S+ LK+ GIDHL+ EKH+ AWR +RWD FCLVTPNWQC LPG Sbjct: 8 HYPVIIIGGGQAGLSMSYCLKERGIDHLIFEKHRFAEAWRSKRWDNFCLVTPNWQCALPG 67 Query: 71 YPYRGDDPYGFMKKDEIVAYLDGFVASFQPPVREGVTVEKLWR-AGARWHLSASDGAYTA 129 + Y GDDP GFMKK+EIV Y++ +V F PP+REGVTV+++ R + +S S+G +TA Sbjct: 68 FKYSGDDPNGFMKKEEIVKYIEDYVKLFNPPLREGVTVQRVRRHETGIYEISTSEGEFTA 127 Query: 130 DQVVVAVGGYHIPVVPRAAERLPADIVQIHSSQYLNPQSLPEGEVLVVGTGQSGCQIAED 189 QVV+A GGYH VPR AE+ P DIVQ+HSS Y NP +LPEG VLVVGTGQSGCQIAED Sbjct: 128 GQVVIATGGYHTATVPRMAEKFPEDIVQMHSSDYKNPAALPEGAVLVVGTGQSGCQIAED 187 Query: 190 LHLAGRRVHLGVGEAPRVARTYRGKDVVEWLDKMKYYDLPVDQHPLGTGVREKTNHYVTG 249 LHL GR+VHL VG APR AR YRGKDVV+WL +M YY+LPV +HPL VR K NHYVTG Sbjct: 188 LHLEGRKVHLCVGGAPRTARRYRGKDVVDWLHEMGYYNLPVHEHPLKERVRAKANHYVTG 247 Query: 250 RDGGRDIDLRKFALEGMQLYGKFDTLEGEVVRFGGGLKGYLDEADAVSESIKDSIDKFIA 309 RDGGRDIDLRKFALEGMQL+G+ + +++FG LK LD AD V++SIK++IDK+IA Sbjct: 248 RDGGRDIDLRKFALEGMQLHGRLLEVRQGLLKFGTDLKQNLDNADNVADSIKNTIDKYIA 307 Query: 310 AQQIEAPTEARYVPVWQPPAEEVSTLDLRARGISAVVWCIGFRTDFSWIAEPIFDGRGYP 369 ++ I+ P E RYVPVWQPPAE LD A GI +++W +GF+TD+ W+ P+FDG+GYP Sbjct: 308 SRGIDVPQEERYVPVWQPPAES-PDLDFAASGIRSIIWSMGFQTDYRWLEIPVFDGKGYP 366 Query: 370 GHVRGVTAAPGLYFLGLPWQYTWGSGRFSGIDRDARHL 407 H RGVT PG+YFLGLPWQ+TWGSGRFSG+ DAR L Sbjct: 367 SHQRGVTDVPGVYFLGLPWQHTWGSGRFSGVADDARFL 404