BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2612.p (362 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774393.1| sugar ABC transporter ATPase [Herbaspirillum... 701 0.0 ref|YP_001861492.1| ABC transporter related [Burkholderia phymat... 542 e-152 ref|YP_001890394.1| ABC transporter-like protein [Burkholderia p... 542 e-152 ref|YP_001900883.1| ABC transporter-like protein [Ralstonia pick... 541 e-152 ref|ZP_07675364.1| sugar ABC transporter, ATP-binding protein [R... 540 e-151 >ref|YP_003774393.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ62485.1| ABC-type sugar transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 362 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 349/362 (96%), Positives = 356/362 (98%) Query: 1 MARIEFKNLGHAYGSNPASLKDYALQPMNMVWEDGGAYALLGPSGCGKSTLLNIISGLLQ 60 MARIEFKNLGHAY NPASLKDYALQPMNMVWEDGGAYALLGPSGCGKSTLLNIISGLLQ Sbjct: 1 MARIEFKNLGHAYSGNPASLKDYALQPMNMVWEDGGAYALLGPSGCGKSTLLNIISGLLQ 60 Query: 61 PSEGQVLFDGRDMTRMATRDRNIAQVFQFPVLYDTMSVFDNLAFPLRNRKIAEREVQARV 120 PSEGQVLFDGRDMTRMATRDRNIAQVFQFPVLYDTMSVFDNLAFPLRNRKIAEREVQARV Sbjct: 61 PSEGQVLFDGRDMTRMATRDRNIAQVFQFPVLYDTMSVFDNLAFPLRNRKIAEREVQARV 120 Query: 121 REIAEMLDLTRDLKQRAAGLSADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHMKWELR 180 REIAEMLDLTRDLKQRAAGLSADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHMKWELR Sbjct: 121 REIAEMLDLTRDLKQRAAGLSADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHMKWELR 180 Query: 181 QKLKEIHHQLKLTLIYVTHDQVEALTFADEVVVMTEGKVVQQGKPEALFLRPDHTFVGYF 240 QKLKEIHHQLKLTLIYVTHDQVEALTFADEVVVMTEGKVVQQGKPEALFLRPDHTFVGYF Sbjct: 181 QKLKEIHHQLKLTLIYVTHDQVEALTFADEVVVMTEGKVVQQGKPEALFLRPDHTFVGYF 240 Query: 241 IGSPGMNFCPVRVEGDAVLLGQQRLQVEAAQLQALKNSSGVLKLGIRPEFVELAAPGTAG 300 IGSPGMNFCPVR+EGDAVLLGQQRLQ+EAAQLQALKNS+G LKLGIRPEFVELAAPG G Sbjct: 241 IGSPGMNFCPVRLEGDAVLLGQQRLQIEAAQLQALKNSNGELKLGIRPEFVELAAPGATG 300 Query: 301 AVSAEVTQVQHLGTSQLVTAQFEGMSVKARVAPELKIATGAQWLRLAKPETIYFSNDERI 360 AVSAE+TQVQHLGTSQLVTAQFEGMSVKAR++PE+KIATG QWLRLAKPETIYFSNDERI Sbjct: 301 AVSAEITQVQHLGTSQLVTAQFEGMSVKARLSPEMKIATGNQWLRLAKPETIYFSNDERI 360 Query: 361 GR 362 GR Sbjct: 361 GR 362 >ref|YP_001861492.1| ABC transporter related [Burkholderia phymatum STM815] gb|ACC74446.1| ABC transporter related [Burkholderia phymatum STM815] Length = 370 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 261/361 (72%), Positives = 299/361 (82%) Query: 1 MARIEFKNLGHAYGSNPASLKDYALQPMNMVWEDGGAYALLGPSGCGKSTLLNIISGLLQ 60 MARIEF+NLGHAY NPASL DYALQPM+MVWEDGGAYALLGPSGCGKSTLLNI+SGLL+ Sbjct: 1 MARIEFQNLGHAYRPNPASLDDYALQPMSMVWEDGGAYALLGPSGCGKSTLLNIVSGLLK 60 Query: 61 PSEGQVLFDGRDMTRMATRDRNIAQVFQFPVLYDTMSVFDNLAFPLRNRKIAEREVQARV 120 PSEG+VLF+GRD+T R+RNIAQVFQFPV+YDTM+VFDNLAFPLRNR + EV+ RV Sbjct: 61 PSEGKVLFNGRDVTTQGARERNIAQVFQFPVIYDTMTVFDNLAFPLRNRGLPTTEVRTRV 120 Query: 121 REIAEMLDLTRDLKQRAAGLSADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHMKWELR 180 E+A++LD+ DL ++A+ LSADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHMKW LR Sbjct: 121 HEVADILDMAPDLPRKASNLSADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHMKWMLR 180 Query: 181 QKLKEIHHQLKLTLIYVTHDQVEALTFADEVVVMTEGKVVQQGKPEALFLRPDHTFVGYF 240 ++LK+IH QLKLTLIYVTHDQVEALTFADEVVVMT G+VVQ+G PEALFLRPDH+FVGYF Sbjct: 181 RQLKKIHQQLKLTLIYVTHDQVEALTFADEVVVMTNGRVVQKGGPEALFLRPDHSFVGYF 240 Query: 241 IGSPGMNFCPVRVEGDAVLLGQQRLQVEAAQLQALKNSSGVLKLGIRPEFVELAAPGTAG 300 IGSPGMN CPVR++ + LG QR+ V+ L LKN++G LKLGIRPEFV LA G G Sbjct: 241 IGSPGMNLCPVRLDEGGIKLGSQRIAVDPNTLATLKNTNGDLKLGIRPEFVRLADDGETG 300 Query: 301 AVSAEVTQVQHLGTSQLVTAQFEGMSVKARVAPELKIATGAQWLRLAKPETIYFSNDERI 360 AV A VT+ Q LG QLVTA EG + P L++ G WLRL PET+YFSND+RI Sbjct: 301 AVRAHVTRAQQLGNYQLVTANCEGHVFNVKTEPNLRVVDGPVWLRLDAPETVYFSNDQRI 360 Query: 361 G 361 Sbjct: 361 A 361 >ref|YP_001890394.1| ABC transporter-like protein [Burkholderia phytofirmans PsJN] gb|ACD21023.1| ABC transporter related [Burkholderia phytofirmans PsJN] Length = 362 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 257/362 (70%), Positives = 305/362 (84%) Query: 1 MARIEFKNLGHAYGSNPASLKDYALQPMNMVWEDGGAYALLGPSGCGKSTLLNIISGLLQ 60 MARIEF+NL HAY NPA+L DYALQPM+MVWEDGGAYALLGPSGCGKSTLLNI+SGL+ Sbjct: 1 MARIEFQNLAHAYAPNPATLDDYALQPMSMVWEDGGAYALLGPSGCGKSTLLNIVSGLVT 60 Query: 61 PSEGQVLFDGRDMTRMATRDRNIAQVFQFPVLYDTMSVFDNLAFPLRNRKIAEREVQARV 120 PSEG+VLFDG D+T + R+RNIAQVFQFPV+YDTMSVFDNLAFPLRNRK++ +V+ RV Sbjct: 61 PSEGKVLFDGSDITAKSPRERNIAQVFQFPVIYDTMSVFDNLAFPLRNRKMSAHDVKQRV 120 Query: 121 REIAEMLDLTRDLKQRAAGLSADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHMKWELR 180 E+AE+LD+TR+L ++A LSADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHMKW LR Sbjct: 121 HEVAEILDMTRELPRKANNLSADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHMKWILR 180 Query: 181 QKLKEIHHQLKLTLIYVTHDQVEALTFADEVVVMTEGKVVQQGKPEALFLRPDHTFVGYF 240 ++LK+IH QLKLTLIYVTHDQVEALTFADEVVVMT G+VVQ+G P ALFLRPDH FVGYF Sbjct: 181 RQLKKIHQQLKLTLIYVTHDQVEALTFADEVVVMTNGRVVQKGDPGALFLRPDHAFVGYF 240 Query: 241 IGSPGMNFCPVRVEGDAVLLGQQRLQVEAAQLQALKNSSGVLKLGIRPEFVELAAPGTAG 300 IGSPGMN CP+ + D + +G Q LQ++ L+ L++++G L LGIRPEFV +A+ G AG Sbjct: 241 IGSPGMNLCPIELNADGIKIGTQHLQLDPPTLETLRHANGTLTLGIRPEFVRVASDGEAG 300 Query: 301 AVSAEVTQVQHLGTSQLVTAQFEGMSVKARVAPELKIATGAQWLRLAKPETIYFSNDERI 360 AV A + +VQ LG QLVTAQ +G +A+V P L++ GA WL+LA ET++FSNDERI Sbjct: 301 AVKAHLLRVQQLGNYQLVTAQCDGHVFRAKVEPHLRVGEGAVWLKLATAETVFFSNDERI 360 Query: 361 GR 362 R Sbjct: 361 TR 362 >ref|YP_001900883.1| ABC transporter-like protein [Ralstonia pickettii 12J] gb|ACD28451.1| ABC transporter related [Ralstonia pickettii 12J] Length = 365 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 268/365 (73%), Positives = 305/365 (83%), Gaps = 3/365 (0%) Query: 1 MARIEFKNLGHAYGSNPASLKDYALQPMNMVWEDGGAYALLGPSGCGKSTLLNIISGLLQ 60 MARIEF+NLGH+Y NP +L DYALQPMNM W DGGAYALLGPSGCGKSTLLNIISGLL Sbjct: 1 MARIEFRNLGHSYRPNPQALSDYALQPMNMTWRDGGAYALLGPSGCGKSTLLNIISGLLT 60 Query: 61 PSEGQVLFDGRDMTRMATRDRNIAQVFQFPVLYDTMSVFDNLAFPLRNRKIAEREVQARV 120 PSEGQVLFD RD+T + R+RNIAQVFQFPV+YDTM+VFDNLAFPLRNRK E EV+ RV Sbjct: 61 PSEGQVLFDDRDVTHASPRERNIAQVFQFPVIYDTMTVFDNLAFPLRNRKTPEAEVKKRV 120 Query: 121 REIAEMLDLTRDLKQRAAGLSADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHMKWELR 180 E+AE+L+L LK+RA+GL+ADAKQKISLGRGLVRKDVAAILFDEPLTVIDPH+KW+LR Sbjct: 121 EEVAEILELQHALKRRASGLAADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHLKWQLR 180 Query: 181 QKLKEIHHQLKLTLIYVTHDQVEALTFADEVVVMTEGKVVQQGKPEALFLRPDHTFVGYF 240 ++LK+IH QLKLTLIYVTHDQVEALTFADEVVVMTEGKVVQQG PEALF RPDHTFVGYF Sbjct: 181 RQLKKIHQQLKLTLIYVTHDQVEALTFADEVVVMTEGKVVQQGGPEALFERPDHTFVGYF 240 Query: 241 IGSPGMNFCPVRVEGDAVLLGQQRLQVEAAQLQALKNSSGVLKLGIRPEFVELAAPGTAG 300 IGSPGMN PV V+G+ + LG QRL V L LKN++G LKLGIRPEFV+LAAPG G Sbjct: 241 IGSPGMNLYPVTVDGEVIALGDQRLSVGRDTLATLKNANGSLKLGIRPEFVQLAAPGEVG 300 Query: 301 AVSAEVTQVQHLGTSQLVTAQF---EGMSVKARVAPELKIATGAQWLRLAKPETIYFSND 357 V+A V QVQ LGT QL+TA G+ +KA++ E+ + WLRL P+T+Y+SND Sbjct: 301 TVAANVHQVQQLGTHQLLTASLGEAGGLPIKAKLPNEVSVTESRVWLRLDAPQTLYYSND 360 Query: 358 ERIGR 362 ERIGR Sbjct: 361 ERIGR 365 >ref|ZP_07675364.1| sugar ABC transporter, ATP-binding protein [Ralstonia sp. 5_7_47FAA] gb|EFP66264.1| sugar ABC transporter, ATP-binding protein [Ralstonia sp. 5_7_47FAA] Length = 365 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 267/365 (73%), Positives = 305/365 (83%), Gaps = 3/365 (0%) Query: 1 MARIEFKNLGHAYGSNPASLKDYALQPMNMVWEDGGAYALLGPSGCGKSTLLNIISGLLQ 60 MARIEF+NLGH+Y +P +L DYALQPMNM W DGGAYALLGPSGCGKSTLLNIISGLL Sbjct: 1 MARIEFRNLGHSYRPDPQNLSDYALQPMNMTWRDGGAYALLGPSGCGKSTLLNIISGLLT 60 Query: 61 PSEGQVLFDGRDMTRMATRDRNIAQVFQFPVLYDTMSVFDNLAFPLRNRKIAEREVQARV 120 PSEGQVLFD RD+T + R+RNIAQVFQFPV+YDTM+VFDNLAFPLRNRK E EV+ RV Sbjct: 61 PSEGQVLFDDRDVTHASPRERNIAQVFQFPVIYDTMTVFDNLAFPLRNRKTPEAEVKKRV 120 Query: 121 REIAEMLDLTRDLKQRAAGLSADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHMKWELR 180 E+AE+L+L LK+RA+GL+ADAKQKISLGRGLVRKDVAAILFDEPLTVIDPH+KW+LR Sbjct: 121 EEVAEILELQHALKRRASGLAADAKQKISLGRGLVRKDVAAILFDEPLTVIDPHLKWQLR 180 Query: 181 QKLKEIHHQLKLTLIYVTHDQVEALTFADEVVVMTEGKVVQQGKPEALFLRPDHTFVGYF 240 ++LK+IH QLKLTLIYVTHDQVEALTFADEVVVMTEGKVVQQG PEALF RPDHTFVGYF Sbjct: 181 RQLKKIHQQLKLTLIYVTHDQVEALTFADEVVVMTEGKVVQQGGPEALFERPDHTFVGYF 240 Query: 241 IGSPGMNFCPVRVEGDAVLLGQQRLQVEAAQLQALKNSSGVLKLGIRPEFVELAAPGTAG 300 IGSPGMN PV V+GD + LG QRL V L LK+++G LKLGIRPEFV+LAAPG G Sbjct: 241 IGSPGMNLYPVTVDGDVIALGDQRLSVGRDTLATLKHANGSLKLGIRPEFVQLAAPGEVG 300 Query: 301 AVSAEVTQVQHLGTSQLVTAQF---EGMSVKARVAPELKIATGAQWLRLAKPETIYFSND 357 V+A V QVQ LGT QL+TA G+ +KA++ E+ + WLRL P+T+Y+SND Sbjct: 301 TVAANVHQVQQLGTHQLLTATLGEAGGLPIKAKLPNEVSVTESRVWLRLDAPQTLYYSND 360 Query: 358 ERIGR 362 ERIGR Sbjct: 361 ERIGR 365