BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2607.p (237 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_913012.1| hypothetical protein Cpha266_2600 [Chlorobium p... 228 6e-58 ref|YP_003295689.1| hypothetical protein ETAE_1637 [Edwardsiella... 187 1e-45 ref|YP_002933401.1| hypothetical protein NT01EI_1990 [Edwardsiel... 184 8e-45 ref|ZP_06714834.1| conserved hypothetical protein [Edwardsiella ... 184 1e-44 ref|ZP_01787479.1| plasmid RP4 TraN-related protein [Haemophilus... 171 6e-41 >ref|YP_913012.1| hypothetical protein Cpha266_2600 [Chlorobium phaeobacteroides DSM 266] gb|ABL66588.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM 266] Length = 246 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 122/232 (52%), Positives = 155/232 (66%), Gaps = 3/232 (1%) Query: 1 MNQVLRAAWPPEFPDVVIHSPESVVKKHLAYDAAKAGDVEAAIELINDTISDDAIESLID 60 +N + R W FP V IH+ ES VK+H +Y AAK+GD +AA L++ ++ +E L + Sbjct: 10 VNMITRYPWDV-FPPVWIHANESTVKQHPSYLAAKSGDPDAAYLLVDALLNPIIVEQLAE 68 Query: 61 IGNAWSPVLISVHAEERVGVNAIPEVMADYLGQILGWSVESDVVQANVVNHTGASGFSRL 120 PVL+S HA E GVNAIPE +AD L Q LGW + +VQ N+V+HTGA GFSRL Sbjct: 69 TFARQKPVLVSAHAVEGSGVNAIPEALADILAQQLGWPTDMSIVQINIVSHTGADGFSRL 128 Query: 121 ARQAFFSGSVRR-EVYVIVDDFIGQGGTIANLRGHIHQQGGIVLCATTLTGKPHSALLHQ 179 ARQA F G + + Y+++DDFIGQGGT+ANLR HI +GG VL AT LTGKP+SA + Sbjct: 129 ARQAKFDGDILAGKPYLLIDDFIGQGGTLANLRSHIMSRGGSVLGATVLTGKPYSAKMAL 188 Query: 180 SQDRLIELRSKHGQ-LEEWWKERFGFGFECLTASETRYLINTATSEKIRAGI 230 L +LR KHGQ LE WW RFGF F+CLT SE RYL+NT ++IR I Sbjct: 189 DGVTLEQLRLKHGQRLENWWNHRFGFKFDCLTESEARYLLNTPDVDRIRNKI 240 >ref|YP_003295689.1| hypothetical protein ETAE_1637 [Edwardsiella tarda EIB202] gb|ACY84478.1| hypothetical protein ETAE_1637 [Edwardsiella tarda EIB202] Length = 1535 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 105/227 (46%), Positives = 139/227 (61%), Gaps = 3/227 (1%) Query: 4 VLRAAWPPEFPDVVIHSPESVVKKHLAYDAAKAGDVEAAIELINDTISDDAIESLIDIGN 63 V R WP +FPDVV+H+ H Y AAK GD +AA L+ D ++ AI+ + I Sbjct: 428 VQRPPWPADFPDVVLHARLGDATAHPDYAAAKGGDKDAAYRLVADVLNKAAIDDIRGIIG 487 Query: 64 AWSPVLISVHAEERVGVNAIPEVMADYLGQILGWSVESDVVQANVVNHTGASGFSRLARQ 123 S VL +VHAEE G N IP+ MA+ LG++L V+S +VQ V +G GF RLA Q Sbjct: 488 NHSVVLTAVHAEEASGRNKIPQAMAEVLGKVLHQEVDSGIVQTVRVGRSGLDGFGRLANQ 547 Query: 124 AFFSGSVRREV-YVIVDDFIGQGGTIANLRGHIHQQGGIVLCATTLTGKPHSALLHQSQD 182 F+G VRR+V Y I+DD + QGGT+A LRG+I QGG V+ A+ LTGK +SA + S Sbjct: 548 PGFAGEVRRDVPYFILDDTLTQGGTLAGLRGYIETQGGQVIGASALTGKRYSAKMALSAA 607 Query: 183 RLIELRSKHG--QLEEWWKERFGFGFECLTASETRYLINTATSEKIR 227 L LR+ G LE WWK++FG+GF LT SE YL+ ++ IR Sbjct: 608 TLARLRTHLGGSNLENWWKQQFGYGFSGLTESEAHYLLRAGDADAIR 654 >ref|YP_002933401.1| hypothetical protein NT01EI_1990 [Edwardsiella ictaluri 93-146] gb|ACR69166.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 2608 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 104/225 (46%), Positives = 137/225 (60%), Gaps = 3/225 (1%) Query: 6 RAAWPPEFPDVVIHSPESVVKKHLAYDAAKAGDVEAAIELINDTISDDAIESLIDIGNAW 65 R WP +FPDVV+H+ H Y AAK GD AA L+ D +S DAI+ + I Sbjct: 1032 RPPWPDDFPDVVLHARLGGATGHPDYKAAKNGDELAARRLVADVLSKDAIDKIRRIIGKR 1091 Query: 66 SPVLISVHAEERVGVNAIPEVMADYLGQILGWSVESDVVQANVVNHTGASGFSRLARQAF 125 +L +VHAEE G N IP+ MAD LG IL V+ ++VQA V +G GF+RLA Q Sbjct: 1092 EVLLTAVHAEEASGRNKIPQAMADMLGHILHQHVDDNIVQAVRVGRSGMDGFARLANQPS 1151 Query: 126 FSGSVRREV-YVIVDDFIGQGGTIANLRGHIHQQGGIVLCATTLTGKPHSALLHQSQDRL 184 F+G VRR+ Y I+DD + QGGT+A LRG+I QGG V+ A+ LTGK +SA + S L Sbjct: 1152 FAGEVRRDAHYFILDDTLTQGGTLAGLRGYIEAQGGQVIGASALTGKMYSAKMALSASTL 1211 Query: 185 IELRSKHG--QLEEWWKERFGFGFECLTASETRYLINTATSEKIR 227 LR G LE WWK++ G+GF+ LT SE +YL+ ++ IR Sbjct: 1212 SRLRVHFGGSNLEAWWKQQVGYGFDGLTESEAQYLLRAGDADAIR 1256 >ref|ZP_06714834.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685] gb|EFE22844.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685] Length = 1822 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 105/225 (46%), Positives = 137/225 (60%), Gaps = 3/225 (1%) Query: 6 RAAWPPEFPDVVIHSPESVVKKHLAYDAAKAGDVEAAIELINDTISDDAIESLIDIGNAW 65 R WP +FPDVVIH+ H Y AAK GD AA L+ D +S +AI+ + I Sbjct: 1029 RPPWPEDFPDVVIHTRLGDATGHPDYKAAKNGDELAARRLVADVLSKEAIDKIRRIIGKR 1088 Query: 66 SPVLISVHAEERVGVNAIPEVMADYLGQILGWSVESDVVQANVVNHTGASGFSRLARQAF 125 +L +VHAEE G N IP+ MAD LG IL V+ ++VQA V +G GF+RLA Q Sbjct: 1089 EVLLTAVHAEEASGRNKIPQAMADMLGHILHQHVDDNIVQAVRVGRSGMDGFARLANQPS 1148 Query: 126 FSGSVRREV-YVIVDDFIGQGGTIANLRGHIHQQGGIVLCATTLTGKPHSALLHQSQDRL 184 F+G VRR+ Y I+DD + QGGT+A LRG+I QGG V+ A+ LTGK +SA + S L Sbjct: 1149 FAGEVRRDAHYFILDDTLTQGGTLAGLRGYIEAQGGQVIGASALTGKMYSAKMALSASTL 1208 Query: 185 IELRSKHG--QLEEWWKERFGFGFECLTASETRYLINTATSEKIR 227 LR G LE WWK++FG+GF+ LT SE +YL+ + IR Sbjct: 1209 SRLRVHFGGSNLEAWWKQQFGYGFDGLTESEAQYLLRAGDAVAIR 1253 >ref|ZP_01787479.1| plasmid RP4 TraN-related protein [Haemophilus influenzae R3021] gb|EDJ90202.1| plasmid RP4 TraN-related protein [Haemophilus influenzae R3021] Length = 477 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 94/230 (40%), Positives = 136/230 (59%), Gaps = 2/230 (0%) Query: 3 QVLRAAWPPEFPDVVIHSPESVVKKHLAYDAAKAGDVEAAIELINDTISDDAIESLIDIG 62 Q +R+ W +FPD +I H Y+ AK G +E A +L D ++DDA+ L + Sbjct: 242 QQMRSEWSDDFPDTIIDRKLGDATSHPLYENAKKGSIEDAYQLAKDLVTDDAVNKLKQLV 301 Query: 63 NAWSPVLISVHAEERVGVNAIPEVMADYLGQILGWSVESDVVQANVVNHTGASGFSRLAR 122 + +LI VHAEE VG N IP +A L + L V+ +VQA V+ TG G+ RL Sbjct: 302 GNKNAILIPVHAEEAVGRNMIPVAIATVLSKKLHIPVDLSIVQATKVSRTGGDGWHRLVY 361 Query: 123 QAFFSGSVRREVY-VIVDDFIGQGGTIANLRGHIHQQGGIVLCATTLTGKPHSALLHQSQ 181 F G V ++ Y +I+DD QGGT+A+L+G+I + G V+ + LTGK +S L S+ Sbjct: 362 SPAFDGMVPKDKYAIILDDTQTQGGTLASLKGYIEENKGKVIASYALTGKQYSVQLRLSK 421 Query: 182 DRLIELRSKHGQLEEWWKERFGFGFECLTASETRYLINT-ATSEKIRAGI 230 D L ELRSK+G+LE WWK+ FG+ F LT E R++IN+ T +++R I Sbjct: 422 DTLAELRSKYGELESWWKKEFGYDFSRLTEWEARFIINSRKTPDEVRNTI 471