BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2592.p (295 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774377.1| branched-chain amino acid ABC transporter AT... 401 e-110 ref|YP_004155775.1| ABC transporter [Variovorax paradoxus EPS] >... 330 2e-88 ref|YP_002547037.1| ABC transporter nucleotide binding/ATPase pr... 311 9e-83 ref|YP_004608864.1| ABC transporter-like protein [Mesorhizobium ... 301 8e-80 ref|YP_004139511.1| ABC transporter [Mesorhizobium ciceri biovar... 298 5e-79 >ref|YP_003774377.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ62469.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 263 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 234/260 (90%), Positives = 242/260 (93%) Query: 28 RQASAPVLQLEGISLSFGGVQALRHVDLALHEREILAVIGPNGAGKSSLVNVMSGLYRPT 87 R ++APVLQLEG+SLSFGGVQALRHVDLALHEREILAVIGPNGAGKSSLVNVMSGLYRPT Sbjct: 2 RASAAPVLQLEGVSLSFGGVQALRHVDLALHEREILAVIGPNGAGKSSLVNVMSGLYRPT 61 Query: 88 QGRVSLAGQRFRQVPTARLARLGVARTFQNLALFKGLSVRDNIVLGRVDAMRASFVEQIA 147 QG VSL G+R RQVPTARL RLGVARTFQNLALFKGLSVRDNIVLGRV+AMRASFVEQI Sbjct: 62 QGTVSLGGRRLRQVPTARLGRLGVARTFQNLALFKGLSVRDNIVLGRVNAMRASFVEQII 121 Query: 148 GLGRARRERNEARALAAQMMDFLDLRAHAERPAGGLPYGLQKRVELARALVAQPRLLLLD 207 GLGRARRER +ARA A QMM FLDLRA+AER GGLPYGLQKRVELARALVA+PRLLLLD Sbjct: 122 GLGRARRERIDARAQAEQMMAFLDLRAYAERQVGGLPYGLQKRVELARALVARPRLLLLD 181 Query: 208 EPMAGMTVTEKSEMTHFVRAARDQFGTAILLIEHDIGLVFGLSDRVVVLQHGSKIADGAP 267 EPMAGMTVTEKSEM FVRAARDQF TAILLIEHDIGLVFGLSDRVVVL HGSKIADGAP Sbjct: 182 EPMAGMTVTEKSEMADFVRAARDQFDTAILLIEHDIGLVFGLSDRVVVLHHGSKIADGAP 241 Query: 268 AEVRQDAAVIEAYLGVAQPE 287 A VRQDAAVIEAYLGVAQ E Sbjct: 242 AAVRQDAAVIEAYLGVAQQE 261 >ref|YP_004155775.1| ABC transporter [Variovorax paradoxus EPS] gb|ADU37664.1| ABC transporter related protein [Variovorax paradoxus EPS] Length = 296 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 198/285 (69%), Positives = 225/285 (78%), Gaps = 7/285 (2%) Query: 10 QLAPLELGAAAHATAPLARQASA-------PVLQLEGISLSFGGVQALRHVDLALHEREI 62 + P+ LG A P R A A VL+LEGI LSFGGV AL VDL++ + E+ Sbjct: 7 EAGPVSLGVDPVAFMPAGRAAPAGKDTGTSAVLRLEGIDLSFGGVTALSGVDLSIAKGEV 66 Query: 63 LAVIGPNGAGKSSLVNVMSGLYRPTQGRVSLAGQRFRQVPTARLARLGVARTFQNLALFK 122 AVIGPNGAGKSSLVNV+SGLYRP +GRV + G+ F VPTARLARLG+ARTFQNLALFK Sbjct: 67 RAVIGPNGAGKSSLVNVISGLYRPDRGRVWIGGRSFGHVPTARLARLGIARTFQNLALFK 126 Query: 123 GLSVRDNIVLGRVDAMRASFVEQIAGLGRARRERNEARALAAQMMDFLDLRAHAERPAGG 182 GLSVRDN+VLGRVDA R++F+EQ+ GLGRARRER +ARA A ++ FL L A +ERPAG Sbjct: 127 GLSVRDNVVLGRVDAARSTFIEQLIGLGRARREREDARARADAIIGFLGLGAVSERPAGT 186 Query: 183 LPYGLQKRVELARALVAQPRLLLLDEPMAGMTVTEKSEMTHFVRAARDQFGTAILLIEHD 242 L YGLQKRVELARALVA P+LLLLDEPMAGMTVTEKSE+ HFVRAARD+FGT ILLIEHD Sbjct: 187 LAYGLQKRVELARALVAAPQLLLLDEPMAGMTVTEKSELVHFVRAARDEFGTTILLIEHD 246 Query: 243 IGLVFGLSDRVVVLQHGSKIADGAPAEVRQDAAVIEAYLGVAQPE 287 IG+V GLSDRV V HG KIADG PAEVR D VI+AYLGVA + Sbjct: 247 IGVVLGLSDRVAVFDHGVKIADGTPAEVRSDPVVIDAYLGVAHED 291 >ref|YP_002547037.1| ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) [Agrobacterium vitis S4] gb|ACM38321.1| ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) [Agrobacterium vitis S4] Length = 296 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 169/260 (65%), Positives = 205/260 (78%), Gaps = 1/260 (0%) Query: 29 QASAPVLQLEGISLSFGGVQALRHVDLALHEREILAVIGPNGAGKSSLVNVMSGLYRPTQ 88 +AS+ L L G++LSFGGV AL +DL + + EI A+IGPNGAGKSS++NV+SGLY+P Sbjct: 32 KASSNALALSGVTLSFGGVVALSDIDLKVSKGEIRAIIGPNGAGKSSIINVISGLYQPDH 91 Query: 89 GRVSLAGQRFRQVPTARLARLGVARTFQNLALFKGLSVRDNIVLGRVDAMRASFVEQIAG 148 GRVS+ F +VPT RLA+LG+ARTFQNLALFKGLSV DN++ GRV R+SFVEQI G Sbjct: 92 GRVSIGELHFSRVPTQRLAQLGIARTFQNLALFKGLSVLDNVMAGRVYRNRSSFVEQIIG 151 Query: 149 LGRARRERNEARALAAQMMDFLDLRAHAERPAGGLPYGLQKRVELARALVAQPRLLLLDE 208 GRA RE +AR + ++DFL L +R AG LPYGLQKRVELARALVA+P +LLLDE Sbjct: 152 YGRAAREHKDARDRSVAILDFLHLTDLRDRLAGTLPYGLQKRVELARALVAEPDILLLDE 211 Query: 209 PMAGMTVTEKSEMTHFVRAARDQFGTAILLIEHDIGLVFGLSDRVVVLQHGSKIADGAPA 268 PMAGMT TEK+EM H+VRAARD+FGT ++LIEHDIG+V GLSD V VL +G KIADG PA Sbjct: 212 PMAGMTATEKNEMAHYVRAARDEFGTTVVLIEHDIGVVMGLSDHVAVLDYGRKIADGTPA 271 Query: 269 EVRQDAAVIEAYLGVAQPEH 288 E+ D VI+AYLGVA PE+ Sbjct: 272 EISADQKVIDAYLGVA-PEN 290 >ref|YP_004608864.1| ABC transporter-like protein [Mesorhizobium opportunistum WSM2075] gb|AEH84770.1| ABC transporter related protein [Mesorhizobium opportunistum WSM2075] Length = 311 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 169/254 (66%), Positives = 200/254 (78%) Query: 31 SAPVLQLEGISLSFGGVQALRHVDLALHEREILAVIGPNGAGKSSLVNVMSGLYRPTQGR 90 +AP+L L+GI LSFGGV AL +DL++ EI A+IGPNGAGKSSL+NV+SG+YRP +G Sbjct: 49 AAPLLSLQGIGLSFGGVVALADIDLSVQPGEIRAIIGPNGAGKSSLINVISGVYRPDRGH 108 Query: 91 VSLAGQRFRQVPTARLARLGVARTFQNLALFKGLSVRDNIVLGRVDAMRASFVEQIAGLG 150 V L G QVPT RLARLGVARTFQNLALFKGLSV DN+ G +R++F Q+ G+G Sbjct: 109 VLLDGVSHAQVPTQRLARLGVARTFQNLALFKGLSVLDNVASGLAYKVRSNFAGQVLGIG 168 Query: 151 RARRERNEARALAAQMMDFLDLRAHAERPAGGLPYGLQKRVELARALVAQPRLLLLDEPM 210 R+R E+ E R A Q+++FLDL A +R AG LPYGLQKRVELARALVAQPRLLLLDEPM Sbjct: 169 RSRGEQRETRGRADQVLEFLDLTAVRDRLAGTLPYGLQKRVELARALVAQPRLLLLDEPM 228 Query: 211 AGMTVTEKSEMTHFVRAARDQFGTAILLIEHDIGLVFGLSDRVVVLQHGSKIADGAPAEV 270 AGMT EKSEM FVRAARD+F T ++LIEHD+G+V GLSDR+ VL +G KIADG P EV Sbjct: 229 AGMTSGEKSEMAGFVRAARDRFATTVVLIEHDVGVVMGLSDRIAVLDYGRKIADGTPDEV 288 Query: 271 RQDAAVIEAYLGVA 284 R D VI+AYLGVA Sbjct: 289 RNDQRVIDAYLGVA 302 >ref|YP_004139511.1| ABC transporter [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV09461.1| ABC transporter related protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 311 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 167/265 (63%), Positives = 206/265 (77%), Gaps = 1/265 (0%) Query: 20 AHATAPLARQASAPVLQLEGISLSFGGVQALRHVDLALHEREILAVIGPNGAGKSSLVNV 79 A + +A ASA +L L+GISLSFGGV AL +DL++ + EI A+IGPNGAGKSSL+NV Sbjct: 39 AKSAGAVAGDASA-LLSLQGISLSFGGVVALADIDLSVRQGEIRAIIGPNGAGKSSLINV 97 Query: 80 MSGLYRPTQGRVSLAGQRFRQVPTARLARLGVARTFQNLALFKGLSVRDNIVLGRVDAMR 139 +SG+YRP +G V L G + QVPT RLA LGVARTFQNLALFKGLSV DN+ G +R Sbjct: 98 ISGVYRPDRGHVQLDGTSYAQVPTQRLAHLGVARTFQNLALFKGLSVLDNVASGLAYKVR 157 Query: 140 ASFVEQIAGLGRARRERNEARALAAQMMDFLDLRAHAERPAGGLPYGLQKRVELARALVA 199 ++F Q+ G+GR+R E+ ++R+ A Q+++FL L A +R G LPYGLQKRVELARALVA Sbjct: 158 SNFAGQVLGIGRSRGEQRDSRSRAEQILEFLHLTAIRDRLVGTLPYGLQKRVELARALVA 217 Query: 200 QPRLLLLDEPMAGMTVTEKSEMTHFVRAARDQFGTAILLIEHDIGLVFGLSDRVVVLQHG 259 +PRLLLLDEPMAGMT +EKSEM FVRAARD+F T ++LIEHD+G+V GLSDR+ VL +G Sbjct: 218 EPRLLLLDEPMAGMTASEKSEMASFVRAARDRFATTVVLIEHDVGVVMGLSDRIAVLDYG 277 Query: 260 SKIADGAPAEVRQDAAVIEAYLGVA 284 KIAD P EVR D VI+AYLGVA Sbjct: 278 RKIADATPDEVRNDQRVIDAYLGVA 302