BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2591.p (388 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774376.1| coenzyme F420-dependent N5,N10-methylene tet... 695 0.0 ref|YP_969250.1| luciferase family protein [Acidovorax citrulli ... 662 0.0 ref|YP_004155776.1| luciferase-like protein [Variovorax paradoxu... 660 0.0 ref|YP_004233317.1| alkanesulfonate monooxygenase [Acidovorax av... 655 0.0 ref|ZP_02905146.1| luciferase family protein [Burkholderia ambif... 652 0.0 >ref|YP_003774376.1| coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase [Herbaspirillum seropedicae SmR1] gb|ADJ62468.1| coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase protein [Herbaspirillum seropedicae SmR1] Length = 385 Score = 695 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 369/388 (95%), Positives = 375/388 (96%), Gaps = 3/388 (0%) Query: 1 MSQAPATTTSATPRTDAVKFAYWVPNVSGGLVVSTIPQRTDWSLEYNQRLAVAAEKAGFE 60 MSQAP+TT +AT RTDAVKFAYWVPNVSGGLVVSTIPQRTDWSLEYNQRLAV AEKAGFE Sbjct: 1 MSQAPSTTAAAT-RTDAVKFAYWVPNVSGGLVVSTIPQRTDWSLEYNQRLAVTAEKAGFE 59 Query: 61 YALSQIRFTAGYGAEYQHESVSFSQALLHATTKLKVLAAILPGPWHPAVVAKQIATIDHI 120 YALSQIRFTAGYGAEYQHESVSFSQALLHATTKLKVLAAILPGPWHPAVVAKQIATIDHI Sbjct: 60 YALSQIRFTAGYGAEYQHESVSFSQALLHATTKLKVLAAILPGPWHPAVVAKQIATIDHI 119 Query: 121 SQGRIAINVVSGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQDDFTFKGDFYRF 180 S GRIAINVVSGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQDDFTFKGDFYRF Sbjct: 120 SNGRIAINVVSGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQDDFTFKGDFYRF 179 Query: 181 NNYTLSPKPVQKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTVEGLKAQIDDIQAKAAQ 240 NNYTLSPKPVQKPHPEIFQGGSSRAARDNAASVSDWYFTNGNT+EGLKAQIDDIQAKAAQ Sbjct: 180 NNYTLSPKPVQKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTLEGLKAQIDDIQAKAAQ 239 Query: 241 NGHKVRIGVNAFVIARDTEEEAQAVLQDIIDHAHVEAVHAFGDAVKQAGKASPEGEGNWA 300 NGHKVRIGVNAFVIARDTEEEAQAVLQDIIDHAHVEAVHAFGDAVKQAGKASPEGEGNWA Sbjct: 240 NGHKVRIGVNAFVIARDTEEEAQAVLQDIIDHAHVEAVHAFGDAVKQAGKASPEGEGNWA 299 Query: 301 KSTFDDLVQYNDGFKTNLIGTPQQIAERIVALKAIGVDLVLTGFLHFIEEVEYFGQKVLP 360 KSTF+DLVQYNDGFKTNLIGTPQQIAERIVALKAIGVDLVLTGFLHFIEEVEYFGQKVLP Sbjct: 300 KSTFEDLVQYNDGFKTNLIGTPQQIAERIVALKAIGVDLVLTGFLHFIEEVEYFGQKVLP 359 Query: 361 LVRELEARQAAGTAQGNASRSAALEAVA 388 LVRELEARQAA A + + LEAVA Sbjct: 360 LVRELEARQAATAAS--PAAAPVLEAVA 385 >ref|YP_969250.1| luciferase family protein [Acidovorax citrulli AAC00-1] gb|ABM31476.1| luciferase family protein [Acidovorax citrulli AAC00-1] Length = 378 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 340/378 (89%), Positives = 356/378 (94%), Gaps = 2/378 (0%) Query: 11 ATPRTDAVKFAYWVPNVSGGLVVSTIPQRTDWSLEYNQRLAVAAEKAGFEYALSQIRFTA 70 +T R + V+FAYWVPNVSGGLVVSTI QRTDWSLEYNQRLAVAAEKAGFEYALSQIRFTA Sbjct: 2 STSRNEPVQFAYWVPNVSGGLVVSTIEQRTDWSLEYNQRLAVAAEKAGFEYALSQIRFTA 61 Query: 71 GYGAEYQHESVSFSQALLHATTKLKVLAAILPGPWHPAVVAKQIATIDHISQGRIAINVV 130 GYGAE+QHESVSFSQALLHATT+LKVLAAILPGPW+PAVVAKQIATIDHIS GRI INVV Sbjct: 62 GYGAEHQHESVSFSQALLHATTRLKVLAAILPGPWNPAVVAKQIATIDHISGGRIGINVV 121 Query: 131 SGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQDDFTFKGDFYRFNNYTLSPKPV 190 SGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQD FTFKGDFYRFN+YTLSPKP+ Sbjct: 122 SGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQDRFTFKGDFYRFNDYTLSPKPL 181 Query: 191 QKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTVEGLKAQIDDIQAKAAQNGHKVRIGVN 250 QKPHPEIFQGGSSRAARDNAASVSDWYFTNGNT E LKAQIDDIQAKA NGH VRIGVN Sbjct: 182 QKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTPENLKAQIDDIQAKARANGHTVRIGVN 241 Query: 251 AFVIARDTEEEAQAVLQDIIDHAHVEAVHAFGDAVKQAGKASPEGEGNWAKSTFDDLVQY 310 AFVIARDTEEEAQAVLQDII HAHVEAVHAFGDAVKQAG+ASPEGEGNWAKSTF+DLVQY Sbjct: 242 AFVIARDTEEEAQAVLQDIIRHAHVEAVHAFGDAVKQAGRASPEGEGNWAKSTFEDLVQY 301 Query: 311 NDGFKTNLIGTPQQIAERIVALKAIGVDLVLTGFLHFIEEVEYFGQKVLPLVRELEARQA 370 NDGF+TNLIGTP+QIAERIVALKAIGVDLVLTGFLHFIEEVEYFG++VLPLVRELEARQA Sbjct: 302 NDGFRTNLIGTPRQIAERIVALKAIGVDLVLTGFLHFIEEVEYFGREVLPLVRELEARQA 361 Query: 371 AGTAQGNASRSAALEAVA 388 +AQ + ALEA A Sbjct: 362 --SAQPQSRPQPALEAEA 377 >ref|YP_004155776.1| luciferase-like protein [Variovorax paradoxus EPS] gb|ADU37665.1| Luciferase-like, subgroup [Variovorax paradoxus EPS] Length = 379 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 341/388 (87%), Positives = 356/388 (91%), Gaps = 9/388 (2%) Query: 1 MSQAPATTTSATPRTDAVKFAYWVPNVSGGLVVSTIPQRTDWSLEYNQRLAVAAEKAGFE 60 MSQ +TT VKFAYWVPNVSGGLVVSTI QRTDWSLEYNQRLA+AAEKAGFE Sbjct: 1 MSQPYSTTAP-------VKFAYWVPNVSGGLVVSTIEQRTDWSLEYNQRLALAAEKAGFE 53 Query: 61 YALSQIRFTAGYGAEYQHESVSFSQALLHATTKLKVLAAILPGPWHPAVVAKQIATIDHI 120 YALSQIRFTAGYGAEYQHESVSFSQALLHATTKLKVLAAILPGPW+PAVVAKQIATIDHI Sbjct: 54 YALSQIRFTAGYGAEYQHESVSFSQALLHATTKLKVLAAILPGPWNPAVVAKQIATIDHI 113 Query: 121 SQGRIAINVVSGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQDDFTFKGDFYRF 180 S GRIAINVVSGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWT+D+FTFKGDFYRF Sbjct: 114 SNGRIAINVVSGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTEDNFTFKGDFYRF 173 Query: 181 NNYTLSPKPVQKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTVEGLKAQIDDIQAKAAQ 240 +NYTLSPKPVQKPHPEIFQGGSSRAARDNAASVSDWYFTNGNT EGLK QIDDIQAKAA+ Sbjct: 174 SNYTLSPKPVQKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTPEGLKVQIDDIQAKAAE 233 Query: 241 NGHKVRIGVNAFVIARDTEEEAQAVLQDIIDHAHVEAVHAFGDAVKQAGKASPEGEGNWA 300 NGH VRIGVNAFVIARDTEEEA+AVL DII HAHVEAVHAFGDA KQAGK+SPEGEGNWA Sbjct: 234 NGHTVRIGVNAFVIARDTEEEAKAVLADIIKHAHVEAVHAFGDAAKQAGKSSPEGEGNWA 293 Query: 301 KSTFDDLVQYNDGFKTNLIGTPQQIAERIVALKAIGVDLVLTGFLHFIEEVEYFGQKVLP 360 KSTF+DLVQYNDGF+TNLIGTPQQIAERIVALKAIGVDL+LTGFLHFIEEVEYFG+KVLP Sbjct: 294 KSTFEDLVQYNDGFRTNLIGTPQQIAERIVALKAIGVDLILTGFLHFIEEVEYFGEKVLP 353 Query: 361 LVRELEARQAAGTAQGNASRSAALEAVA 388 LVR+LE +A A ALEAVA Sbjct: 354 LVRKLE--EAGQGANAGKQSKPALEAVA 379 >ref|YP_004233317.1| alkanesulfonate monooxygenase [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX44750.1| Alkanesulfonate monooxygenase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 376 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 332/362 (91%), Positives = 346/362 (95%) Query: 11 ATPRTDAVKFAYWVPNVSGGLVVSTIPQRTDWSLEYNQRLAVAAEKAGFEYALSQIRFTA 70 +T R + VKFAYWVPNVSGGLVVSTI QRTDWSLEYNQRLAVAAE+AGFEYALSQIRFTA Sbjct: 2 STSRNEPVKFAYWVPNVSGGLVVSTIEQRTDWSLEYNQRLAVAAEQAGFEYALSQIRFTA 61 Query: 71 GYGAEYQHESVSFSQALLHATTKLKVLAAILPGPWHPAVVAKQIATIDHISQGRIAINVV 130 GYGAE+QHESVSFSQALLHATT+LKVLAAILPGPW+PAVVAKQIATIDHIS GRI INVV Sbjct: 62 GYGAEHQHESVSFSQALLHATTRLKVLAAILPGPWNPAVVAKQIATIDHISGGRIGINVV 121 Query: 131 SGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQDDFTFKGDFYRFNNYTLSPKPV 190 SGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQD FTFKGDFYRFN+YTLSPKP+ Sbjct: 122 SGWFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQDHFTFKGDFYRFNDYTLSPKPL 181 Query: 191 QKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTVEGLKAQIDDIQAKAAQNGHKVRIGVN 250 QKPHPEIFQGGSSRAARDNAASVSDWYFTNGNT EGL+AQIDDIQAKA NGH VRIGVN Sbjct: 182 QKPHPEIFQGGSSRAARDNAASVSDWYFTNGNTPEGLQAQIDDIQAKARANGHTVRIGVN 241 Query: 251 AFVIARDTEEEAQAVLQDIIDHAHVEAVHAFGDAVKQAGKASPEGEGNWAKSTFDDLVQY 310 AFVIARDTEEEAQAVLQDII HAHVEAV AFGDA KQAG++SPEGEGNWA STF+DLVQY Sbjct: 242 AFVIARDTEEEAQAVLQDIIRHAHVEAVQAFGDAAKQAGRSSPEGEGNWATSTFEDLVQY 301 Query: 311 NDGFKTNLIGTPQQIAERIVALKAIGVDLVLTGFLHFIEEVEYFGQKVLPLVRELEARQA 370 NDGF+TNLIGTPQQIAERIVALKAIGVDLVLTGFLHFIEEVEYFG+KVLPLVRELEARQA Sbjct: 302 NDGFRTNLIGTPQQIAERIVALKAIGVDLVLTGFLHFIEEVEYFGRKVLPLVRELEARQA 361 Query: 371 AG 372 A Sbjct: 362 AA 363 >ref|ZP_02905146.1| luciferase family protein [Burkholderia ambifaria MEX-5] gb|EDT43710.1| luciferase family protein [Burkholderia ambifaria MEX-5] Length = 367 Score = 652 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 327/362 (90%), Positives = 341/362 (94%) Query: 13 PRTDAVKFAYWVPNVSGGLVVSTIPQRTDWSLEYNQRLAVAAEKAGFEYALSQIRFTAGY 72 P TD VKFAYWVPNVSGGLVVSTI QRTDWSLEYNQ+LA AE AGF+YALSQIRFTAGY Sbjct: 6 PSTDGVKFAYWVPNVSGGLVVSTIEQRTDWSLEYNQKLARTAEAAGFDYALSQIRFTAGY 65 Query: 73 GAEYQHESVSFSQALLHATTKLKVLAAILPGPWHPAVVAKQIATIDHISQGRIAINVVSG 132 GAEYQHESVSFSQALLHATTKLKVLAAILPGPWHPAVVAKQ+ATIDHIS GRIAINVVSG Sbjct: 66 GAEYQHESVSFSQALLHATTKLKVLAAILPGPWHPAVVAKQLATIDHISNGRIAINVVSG 125 Query: 133 WFKGEFQAIGEPWLEHDERYRRSNEFIRALKGIWTQDDFTFKGDFYRFNNYTLSPKPVQK 192 WFKGEF AIGEPWLEHDERYRRS EFI+ALKGIWTQD+FTFKGDFYRFN+YTLSPKPVQK Sbjct: 126 WFKGEFTAIGEPWLEHDERYRRSKEFIQALKGIWTQDNFTFKGDFYRFNDYTLSPKPVQK 185 Query: 193 PHPEIFQGGSSRAARDNAASVSDWYFTNGNTVEGLKAQIDDIQAKAAQNGHKVRIGVNAF 252 PHPEIFQGGSSRAARDNAASVSDWYFTNGNT E LKAQIDDI+AKAA N H+VRIGVNAF Sbjct: 186 PHPEIFQGGSSRAARDNAASVSDWYFTNGNTPENLKAQIDDIRAKAAANNHRVRIGVNAF 245 Query: 253 VIARDTEEEAQAVLQDIIDHAHVEAVHAFGDAVKQAGKASPEGEGNWAKSTFDDLVQYND 312 VIARDTEEEA AVL DI+ HAHVEAVHAFGDAVKQAG ASPEGEGNWAKSTF+DLVQYND Sbjct: 246 VIARDTEEEALAVLDDIVRHAHVEAVHAFGDAVKQAGSASPEGEGNWAKSTFEDLVQYND 305 Query: 313 GFKTNLIGTPQQIAERIVALKAIGVDLVLTGFLHFIEEVEYFGQKVLPLVRELEARQAAG 372 GF+TNLIGTP+QIAERIVALKAIGVDLVL GFLHFIEEVEYFGQ+VLPLVRELEAR+ A Sbjct: 306 GFRTNLIGTPRQIAERIVALKAIGVDLVLAGFLHFIEEVEYFGQRVLPLVRELEARRQAV 365 Query: 373 TA 374 A Sbjct: 366 AA 367