BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2579.p (252 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_348458.1| Short-chain dehydrogenase/reductase SDR [Pseudo... 337 8e-91 ref|ZP_08528454.1| oxidoreductase [Agrobacterium sp. ATCC 31749]... 278 4e-73 ref|NP_354265.2| oxidoreductase [Agrobacterium tumefaciens str. ... 277 9e-73 ref|YP_827794.1| short-chain dehydrogenase/reductase SDR [Candid... 234 1e-59 ref|ZP_02734565.1| short-chain dehydrogenase/reductase SDR [Gemm... 229 2e-58 >ref|YP_348458.1| Short-chain dehydrogenase/reductase SDR [Pseudomonas fluorescens Pf0-1] gb|ABA74468.1| putative short-chain dehydrogenase/reductase SDR [Pseudomonas fluorescens Pf0-1] Length = 252 Score = 337 bits (865), Expect = 8e-91, Method: Composition-based stats. Identities = 175/252 (69%), Positives = 207/252 (82%) Query: 1 MSSKFLNHVSVVTGGSTGIGLAIAQGLLAEGARRVYVTGRSRQSLEAAVAVLGEAAVAVV 60 MS KF + V+VVTGGSTGIG +IAQ L+AEGA+RVY+T R+ LEAAVA LG+ AVAVV Sbjct: 1 MSGKFSDQVAVVTGGSTGIGFSIAQALIAEGAKRVYITARAADRLEAAVARLGDKAVAVV 60 Query: 61 SDVSSLADLEYLRAEIEKRGDRLDSIFANAGICEKHPFGSTTEADYDRSFDINVKGVFFT 120 SDVS ADL+ L+A I+ R DRLD++FANAGICEK+P G T+EA Y FD+NVKGVFF+ Sbjct: 61 SDVSRQADLDALKATIQTRDDRLDAVFANAGICEKNPLGETSEAAYYAMFDVNVKGVFFS 120 Query: 121 VQTLLPLLRDGGAVILTSSICSGNGMAELSVYNASKAAVRSFARTWTNDLRERKIRVNAL 180 VQTLLPL++D +++LT+SICS NGM LS+YNASKAAVRSFARTW N+L++RKIR N L Sbjct: 121 VQTLLPLMKDASSIVLTASICSSNGMEGLSLYNASKAAVRSFARTWANELKDRKIRANVL 180 Query: 181 SPGFTRTPLMDNSLKLDHDQIDRLKEHVAQITPLGYMADPAEIASAGLFLASADARYITG 240 SPGFTRTPLMDN LK+ I L++HV QITPLGYMA P EIASA LFLAS DARY+ G Sbjct: 181 SPGFTRTPLMDNGLKMSESDIAALRQHVEQITPLGYMAQPEEIASAALFLASDDARYVNG 240 Query: 241 IELTVDGGLSQI 252 +EL VDGGLSQI Sbjct: 241 VELMVDGGLSQI 252 >ref|ZP_08528454.1| oxidoreductase [Agrobacterium sp. ATCC 31749] gb|EGL64896.1| oxidoreductase [Agrobacterium sp. ATCC 31749] Length = 256 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 150/252 (59%), Positives = 188/252 (74%) Query: 1 MSSKFLNHVSVVTGGSTGIGLAIAQGLLAEGARRVYVTGRSRQSLEAAVAVLGEAAVAVV 60 MS F V VVTGGSTGIG ++A+ L GA VYVTGR+ +L+AAVA LG+ A+ V Sbjct: 5 MSGIFSGQVVVVTGGSTGIGFSVAKLFLEGGASTVYVTGRNSANLDAAVAKLGKGAIGFV 64 Query: 61 SDVSSLADLEYLRAEIEKRGDRLDSIFANAGICEKHPFGSTTEADYDRSFDINVKGVFFT 120 SDV+ L+DLE L++ +E G ++D + ANAGI E + G T EA YDR FDINVKGVF+T Sbjct: 65 SDVAKLSDLEQLKSRLEADGRKVDVLVANAGIAENNDLGETHEALYDRIFDINVKGVFYT 124 Query: 121 VQTLLPLLRDGGAVILTSSICSGNGMAELSVYNASKAAVRSFARTWTNDLRERKIRVNAL 180 VQTLLP+LRDGG+++LT SI GM LS YNASKAAVRSFAR++ NDL+ R IRVN + Sbjct: 125 VQTLLPVLRDGGSIVLTGSIVGNKGMERLSAYNASKAAVRSFARSFANDLKGRGIRVNTV 184 Query: 181 SPGFTRTPLMDNSLKLDHDQIDRLKEHVAQITPLGYMADPAEIASAGLFLASADARYITG 240 SPG TRTP+M+N LK+D ++I K ++ P+G MADP EIA A LFLAS+ A YITG Sbjct: 185 SPGVTRTPIMENGLKMDDEKIAGFKAYLKDAAPIGRMADPDEIAEAVLFLASSKASYITG 244 Query: 241 IELTVDGGLSQI 252 +EL+VDGGL+QI Sbjct: 245 VELSVDGGLAQI 256 >ref|NP_354265.2| oxidoreductase [Agrobacterium tumefaciens str. C58] gb|AAK87050.2| oxidoreductase [Agrobacterium tumefaciens str. C58] Length = 252 Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats. Identities = 150/252 (59%), Positives = 188/252 (74%) Query: 1 MSSKFLNHVSVVTGGSTGIGLAIAQGLLAEGARRVYVTGRSRQSLEAAVAVLGEAAVAVV 60 MS F V VVTGGSTGIG ++A+ L GA VYVTGR+ +L+AAVA LG+ A+ V Sbjct: 1 MSGIFSGQVVVVTGGSTGIGFSVAKLFLEGGASTVYVTGRNSANLDAAVAKLGKGAIGFV 60 Query: 61 SDVSSLADLEYLRAEIEKRGDRLDSIFANAGICEKHPFGSTTEADYDRSFDINVKGVFFT 120 SDV+ L+DLE L++ +E G ++D + ANAGI E + G T EA YDR FDINVKGVF+T Sbjct: 61 SDVAKLSDLEQLKSRLEADGRKVDVLVANAGIAENNDLGETHEALYDRIFDINVKGVFYT 120 Query: 121 VQTLLPLLRDGGAVILTSSICSGNGMAELSVYNASKAAVRSFARTWTNDLRERKIRVNAL 180 VQTLLP+LRDGG+++LT SI GM LS YNASKAAVRSFAR++ NDL+ R IRVN + Sbjct: 121 VQTLLPVLRDGGSIVLTGSIVGNKGMERLSAYNASKAAVRSFARSFANDLKGRGIRVNTV 180 Query: 181 SPGFTRTPLMDNSLKLDHDQIDRLKEHVAQITPLGYMADPAEIASAGLFLASADARYITG 240 SPG TRTP+M+N LK+D ++I K ++ P+G MADP EIA A LFLAS+ A YITG Sbjct: 181 SPGVTRTPIMENGLKMDDEKIAGFKAYLKDAAPIGRMADPDEIAEAVLFLASSKASYITG 240 Query: 241 IELTVDGGLSQI 252 +EL+VDGGL+QI Sbjct: 241 VELSVDGGLAQI 252 >ref|YP_827794.1| short-chain dehydrogenase/reductase SDR [Candidatus Solibacter usitatus Ellin6076] gb|ABJ87509.1| short-chain dehydrogenase/reductase SDR [Candidatus Solibacter usitatus Ellin6076] Length = 251 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 125/252 (49%), Positives = 171/252 (67%), Gaps = 1/252 (0%) Query: 1 MSSKFLNHVSVVTGGSTGIGLAIAQGLLAEGARRVYVTGRSRQSLEAAVAVLGEAAVAVV 60 MS + V+V+TGGS+G+GLA A+ + EGA V++TGR + L+AAV+ LGE A V Sbjct: 1 MSQRLAGKVAVITGGSSGLGLATAKRFIDEGAH-VFITGRRQGELDAAVSQLGENATGVQ 59 Query: 61 SDVSSLADLEYLRAEIEKRGDRLDSIFANAGICEKHPFGSTTEADYDRSFDINVKGVFFT 120 D++ ++D+E A ++++ +D +FANAGI E P G TE +D+ FD+NV+G F+ Sbjct: 60 GDIAKISDIEKWYAVVKQKKGAIDVLFANAGIGEFAPLGEITEEHFDKQFDVNVRGTLFS 119 Query: 121 VQTLLPLLRDGGAVILTSSICSGNGMAELSVYNASKAAVRSFARTWTNDLRERKIRVNAL 180 VQ LPLLRDG +++L +SI S G SVY+A+KAA+RSFARTW+ DL+ R IRVNA+ Sbjct: 120 VQKALPLLRDGSSIVLNASIVSVKGNPAFSVYSATKAAIRSFARTWSVDLKSRGIRVNAI 179 Query: 181 SPGFTRTPLMDNSLKLDHDQIDRLKEHVAQITPLGYMADPAEIASAGLFLASADARYITG 240 SPG TP + SL + + +D+ E+ PLG P EIA A LFLAS D+ YITG Sbjct: 180 SPGVVPTPGYNTSLGMTQEVVDQFVENATGTIPLGRAGTPDEIAKAVLFLASDDSSYITG 239 Query: 241 IELTVDGGLSQI 252 IEL VDGGL+QI Sbjct: 240 IELFVDGGLAQI 251 >ref|ZP_02734565.1| short-chain dehydrogenase/reductase SDR [Gemmata obscuriglobus UQM 2246] Length = 250 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 128/252 (50%), Positives = 172/252 (68%), Gaps = 2/252 (0%) Query: 1 MSSKFLNHVSVVTGGSTGIGLAIAQGLLAEGARRVYVTGRSRQSLEAAVAVLGEAAVAVV 60 M+ K V+VVTGG++GIGLA A+ EGA+ V VTGR + L+AAV +G A+ V Sbjct: 1 MAGKLEGKVAVVTGGNSGIGLATAKRFATEGAK-VVVTGRRQPELDAAVKEIGHGAIGVR 59 Query: 61 SDVSSLADLEYLRAEIEKRGDRLDSIFANAGICEKHPFGSTTEADYDRSFDINVKGVFFT 120 DV++LADL+ L A ++++ R+D +FANAG E P G TE Y ++F+ NVKG+ FT Sbjct: 60 GDVANLADLDRLYATVKEKYGRVDVVFANAGGGEFAPLGQITEEHYAKAFNTNVKGLLFT 119 Query: 121 VQTLLPLLRDGGAVILTSSICSGNGMAELSVYNASKAAVRSFARTWTNDLRERKIRVNAL 180 VQ LPL+ DGGA++L +SI S GM SVY+A+KAAVRSFAR+WTNDL+ RKIRVNA+ Sbjct: 120 VQKALPLMPDGGAIVLNASIVSIKGMEAFSVYSATKAAVRSFARSWTNDLKARKIRVNAV 179 Query: 181 SPGFTRTPLMDNSLKLDHDQIDRLKEHVAQITPLGYMADPAEIASAGLFLASADARYITG 240 SPG TP +D ++ ++ K +A PLG M P EIA +FLAS DA Y+ G Sbjct: 180 SPGPIETPAID-AIAGSEEKSKEFKAGMASQVPLGRMGSPDEIAKVAVFLASDDASYVAG 238 Query: 241 IELTVDGGLSQI 252 +EL VDGG++Q+ Sbjct: 239 VELFVDGGMAQV 250