BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2560.p         (181 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774293.1| hypothetical protein Hsero_0867 [Herbaspiril...   209   2e-52
ref|YP_004751682.1| hypothetical protein CFU_1027 [Collimonas fu...   177   6e-43
ref|YP_004231401.1| hypothetical protein BC1001_4959 [Burkholder...   174   6e-42
ref|YP_001352181.1| hypothetical protein mma_0491 [Janthinobacte...   173   8e-42
ref|YP_001098786.1| hypothetical protein HEAR0440 [Herminiimonas...   172   1e-41

>ref|YP_003774293.1| hypothetical protein Hsero_0867 [Herbaspirillum seropedicae SmR1]
 emb|CAM32693.1| Conserved Hypothetical [Herbaspirillum seropedicae]
 gb|ADJ62385.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 148

 Score =  209 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 147/148 (99%), Positives = 148/148 (100%)

Query: 34  MGLKEQITEDMKAAMRAKDMGKLGTIRLLTAAMKQKEVDERVELTDAHVLAIIDKMVKQR 93
           MGLKEQITEDMKAAMRAKDMGKLGTIRLLTAAMKQKEVDERVELTDAHVLAIIDKMVKQR
Sbjct: 1   MGLKEQITEDMKAAMRAKDMGKLGTIRLLTAAMKQKEVDERVELTDAHVLAIIDKMVKQR 60

Query: 94  KDSISQFEAGGRQDLADVEKAELAVLATYMPASLSDDEIKAEVQAAVAATGAAGPQDMGK 153
           KDSISQFEAGGRQDLADVEKAELAVL+TYMPASLSDDEIKAEVQAAVAATGAAGPQDMGK
Sbjct: 61  KDSISQFEAGGRQDLADVEKAELAVLSTYMPASLSDDEIKAEVQAAVAATGAAGPQDMGK 120

Query: 154 VMGVLKPKLAGRADMTAVSALVKAALAS 181
           VMGVLKPKLAGRADMTAVSALVKAALAS
Sbjct: 121 VMGVLKPKLAGRADMTAVSALVKAALAS 148


>ref|YP_004751682.1| hypothetical protein CFU_1027 [Collimonas fungivorans Ter331]
 gb|AEK60859.1| hypothetical protein CFU_1027 [Collimonas fungivorans Ter331]
          Length = 153

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 121/150 (80%), Positives = 137/150 (91%)

Query: 31  EYPMGLKEQITEDMKAAMRAKDMGKLGTIRLLTAAMKQKEVDERVELTDAHVLAIIDKMV 90
           E  MGLKEQITEDMKAAMRAK+  KLG IRL+TAA+KQKEVDER+EL DAHVLAII+KM+
Sbjct: 2   ENRMGLKEQITEDMKAAMRAKETAKLGAIRLITAAIKQKEVDERIELGDAHVLAIIEKMI 61

Query: 91  KQRKDSISQFEAGGRQDLADVEKAELAVLATYMPASLSDDEIKAEVQAAVAATGAAGPQD 150
           KQRKDSISQFEAGGRQDLAD+EKAEL +L+ YMPA L+D EI+AE+ AAVAA+GA+GPQD
Sbjct: 62  KQRKDSISQFEAGGRQDLADIEKAELLILSAYMPAGLTDAEIQAELAAAVAASGASGPQD 121

Query: 151 MGKVMGVLKPKLAGRADMTAVSALVKAALA 180
           MGKVM +LKPKLAGRADMTAVS LVKAAL+
Sbjct: 122 MGKVMAILKPKLAGRADMTAVSGLVKAALS 151


>ref|YP_004231401.1| hypothetical protein BC1001_4959 [Burkholderia sp. CCGE1001]
 gb|ADX58341.1| hypothetical protein BC1001_4959 [Burkholderia sp. CCGE1001]
          Length = 148

 Score =  174 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 114/147 (77%), Positives = 128/147 (87%)

Query: 34  MGLKEQITEDMKAAMRAKDMGKLGTIRLLTAAMKQKEVDERVELTDAHVLAIIDKMVKQR 93
           M LK++I +DMKAAMRA++  +LGTIRLL AA+KQ+EVDERV L DA V A++DKM+KQR
Sbjct: 1   MSLKDRINDDMKAAMRARETERLGTIRLLLAAIKQREVDERVTLDDAAVTAVVDKMIKQR 60

Query: 94  KDSISQFEAGGRQDLADVEKAELAVLATYMPASLSDDEIKAEVQAAVAATGAAGPQDMGK 153
           KDSISQFE  GR DLAD EKAELA+L+TYMP  +SD EI AEVQAAVA TGAAGPQDMGK
Sbjct: 61  KDSISQFEGAGRTDLADKEKAELAILSTYMPEQMSDAEILAEVQAAVAQTGAAGPQDMGK 120

Query: 154 VMGVLKPKLAGRADMTAVSALVKAALA 180
           VMGVLKPKLAGRADMTAVSA VKAALA
Sbjct: 121 VMGVLKPKLAGRADMTAVSAQVKAALA 147


>ref|YP_001352181.1| hypothetical protein mma_0491 [Janthinobacterium sp. Marseille]
 gb|ABR90128.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 149

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 119/146 (81%), Positives = 134/146 (91%)

Query: 34  MGLKEQITEDMKAAMRAKDMGKLGTIRLLTAAMKQKEVDERVELTDAHVLAIIDKMVKQR 93
           M LKEQITEDMKAAMRAK+ GKLGTIRL+TAA+KQKEVDER+EL DA V AII+KM+KQR
Sbjct: 1   MSLKEQITEDMKAAMRAKEAGKLGTIRLITAAIKQKEVDERIELDDAQVQAIIEKMIKQR 60

Query: 94  KDSISQFEAGGRQDLADVEKAELAVLATYMPASLSDDEIKAEVQAAVAATGAAGPQDMGK 153
           KDSISQF+AGGRQDL D+E+AELAVL TYMP++LSD E++ EV AAVAA+GAAGPQDMGK
Sbjct: 61  KDSISQFQAGGRQDLVDIEQAELAVLTTYMPSALSDAEVQGEVAAAVAASGAAGPQDMGK 120

Query: 154 VMGVLKPKLAGRADMTAVSALVKAAL 179
           VM +LKPKLAGRADMTAVS LVKAAL
Sbjct: 121 VMAILKPKLAGRADMTAVSGLVKAAL 146


>ref|YP_001098786.1| hypothetical protein HEAR0440 [Herminiimonas arsenicoxydans]
 emb|CAL60657.1| conserved hypothetical protein; putative GatB/Yqey domain
           [Herminiimonas arsenicoxydans]
          Length = 149

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 115/146 (78%), Positives = 134/146 (91%)

Query: 34  MGLKEQITEDMKAAMRAKDMGKLGTIRLLTAAMKQKEVDERVELTDAHVLAIIDKMVKQR 93
           M LKEQITEDMK+AMRAK+ GKLGTIRL+T+A+KQKEVDER+EL+D  VLAII+KM+KQR
Sbjct: 1   MSLKEQITEDMKSAMRAKEAGKLGTIRLITSAIKQKEVDERIELSDTQVLAIIEKMIKQR 60

Query: 94  KDSISQFEAGGRQDLADVEKAELAVLATYMPASLSDDEIKAEVQAAVAATGAAGPQDMGK 153
           KDSISQF+AGGRQDL D+E+AEL+VL TYMP++LSD E++ EV AAVAA+GAAGPQDMGK
Sbjct: 61  KDSISQFQAGGRQDLVDIEEAELSVLTTYMPSALSDAEVQGEVAAAVAASGAAGPQDMGK 120

Query: 154 VMGVLKPKLAGRADMTAVSALVKAAL 179
           VM +LK KLAGRADMTAVS LVKAAL
Sbjct: 121 VMAILKAKLAGRADMTAVSGLVKAAL 146