BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2559.p         (70 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001098785.1| 30S ribosomal protein S21 [Herminiimonas ars...    82   2e-14
ref|YP_003774292.1| 30S ribosomal protein S21 [Herbaspirillum se...    81   5e-14
ref|YP_003846170.1| 30S ribosomal protein S21 [Gallionella capsi...    81   5e-14
ref|YP_004751683.1| 30S ribosomal protein S21p [Collimonas fungi...    80   8e-14
ref|ZP_08274381.1| SSU ribosomal protein S21p [Oxalobacteraceae ...    80   9e-14

>ref|YP_001098785.1| 30S ribosomal protein S21 [Herminiimonas arsenicoxydans]
 ref|YP_001352180.1| 30S ribosomal protein S21 [Janthinobacterium sp. Marseille]
 sp|A4G2B9|RS21_HERAR RecName: Full=30S ribosomal protein S21
 sp|A6SV83|RS21_JANMA RecName: Full=30S ribosomal protein S21
 emb|CAL60656.1| 30S ribosomal subunit protein S21 [Herminiimonas arsenicoxydans]
 gb|ABR91649.1| small subunit ribosomal protein S21 [Janthinobacterium sp.
          Marseille]
          Length = 70

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 68/70 (97%), Positives = 70/70 (100%)

Query: 1  MTTIRVKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60
          MTTIR+KENEPFEVAMRRFKRTIEKTGLLT+LRAREFYEKPTAERKRKLAAAVKRHYKRI
Sbjct: 1  MTTIRLKENEPFEVAMRRFKRTIEKTGLLTDLRAREFYEKPTAERKRKLAAAVKRHYKRI 60

Query: 61 RSQQLPKKLY 70
          RSQQLPKKLY
Sbjct: 61 RSQQLPKKLY 70


>ref|YP_003774292.1| 30S ribosomal protein S21 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62384.1| 30S ribosomal subunit S21 protein [Herbaspirillum seropedicae
          SmR1]
          Length = 70

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 70/70 (100%), Positives = 70/70 (100%)

Query: 1  MTTIRVKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60
          MTTIRVKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI
Sbjct: 1  MTTIRVKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60

Query: 61 RSQQLPKKLY 70
          RSQQLPKKLY
Sbjct: 61 RSQQLPKKLY 70


>ref|YP_003846170.1| 30S ribosomal protein S21 [Gallionella capsiferriformans ES-2]
 gb|ADL54406.1| ribosomal protein S21 [Gallionella capsiferriformans ES-2]
          Length = 70

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 63/70 (90%), Positives = 68/70 (97%)

Query: 1  MTTIRVKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60
          MTT+RVKENEPFEVAMRRFKR++EKTGLLT+LRAREFYEKPTAERKRKLAAAVKRHYKR+
Sbjct: 1  MTTVRVKENEPFEVAMRRFKRSVEKTGLLTDLRAREFYEKPTAERKRKLAAAVKRHYKRL 60

Query: 61 RSQQLPKKLY 70
          RSQ LP KLY
Sbjct: 61 RSQTLPPKLY 70


>ref|YP_004751683.1| 30S ribosomal protein S21p [Collimonas fungivorans Ter331]
 gb|AEK60860.1| SSU ribosomal protein S21p [Collimonas fungivorans Ter331]
          Length = 70

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 69/70 (98%), Positives = 70/70 (100%)

Query: 1  MTTIRVKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60
          MTTIR+KENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI
Sbjct: 1  MTTIRLKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60

Query: 61 RSQQLPKKLY 70
          RSQQLPKKLY
Sbjct: 61 RSQQLPKKLY 70


>ref|ZP_08274381.1| SSU ribosomal protein S21p [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF32144.1| SSU ribosomal protein S21p [Oxalobacteraceae bacterium IMCC9480]
          Length = 70

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 68/70 (97%), Positives = 70/70 (100%)

Query: 1  MTTIRVKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60
          MTTIR+KENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI
Sbjct: 1  MTTIRLKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60

Query: 61 RSQQLPKKLY 70
          RSQQLPKKL+
Sbjct: 61 RSQQLPKKLF 70