BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2551.p         (108 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774286.1| thioredoxin 1 [Herbaspirillum seropedicae Sm...   196   1e-48
ref|ZP_08275522.1| Thioredoxin [Oxalobacteraceae bacterium IMCC9...   195   2e-48
ref|YP_004751530.1| thioredoxin [Collimonas fungivorans Ter331] ...   191   3e-47
ref|YP_001352313.1| thioredoxin [Janthinobacterium sp. Marseille...   189   1e-46
ref|YP_001099027.1| thioredoxin [Herminiimonas arsenicoxydans] >...   186   1e-45

>ref|YP_003774286.1| thioredoxin 1 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62378.1| thioredoxin 1 (redox factor) protein [Herbaspirillum seropedicae
           SmR1]
          Length = 108

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 103/108 (95%), Positives = 107/108 (99%)

Query: 1   MSEHIKHITDASFEADVLKSDKPVLVDFWAEWCGPCKAIAPILEEVAKEYDGKLQIAKLD 60
           MS+ IKHI+DASFEADVLKSDKPVLVDFWAEWCGPCKAIAPILEEVAKEY+GKLQIAKLD
Sbjct: 1   MSDIIKHISDASFEADVLKSDKPVLVDFWAEWCGPCKAIAPILEEVAKEYEGKLQIAKLD 60

Query: 61  VDSNQAIPAKFGIRGIPTLILFKNGAAAAQKVGALAKGQLVSFIDSNI 108
           VD+NQAIPAKFGIRGIPTLILFKNGAAAAQKVGALAKGQLVSFIDSNI
Sbjct: 61  VDANQAIPAKFGIRGIPTLILFKNGAAAAQKVGALAKGQLVSFIDSNI 108


>ref|ZP_08275522.1| Thioredoxin [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF31003.1| Thioredoxin [Oxalobacteraceae bacterium IMCC9480]
          Length = 108

 Score =  195 bits (495), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 97/108 (89%), Positives = 103/108 (95%)

Query: 1   MSEHIKHITDASFEADVLKSDKPVLVDFWAEWCGPCKAIAPILEEVAKEYDGKLQIAKLD 60
           MSE+IKHITDASFE DVLKSDKPVLVDFWAEWCGPCK+IAPILEE+AKEYDGKL IAK+D
Sbjct: 1   MSENIKHITDASFEIDVLKSDKPVLVDFWAEWCGPCKSIAPILEEIAKEYDGKLLIAKMD 60

Query: 61  VDSNQAIPAKFGIRGIPTLILFKNGAAAAQKVGALAKGQLVSFIDSNI 108
           VDSNQA+PAKFGIRGIPTLILFKNG  AAQKVGA+AKGQL SFIDSNI
Sbjct: 61  VDSNQAVPAKFGIRGIPTLILFKNGVPAAQKVGAMAKGQLTSFIDSNI 108


>ref|YP_004751530.1| thioredoxin [Collimonas fungivorans Ter331]
 gb|AEK60707.1| thioredoxin [Collimonas fungivorans Ter331]
          Length = 108

 Score =  191 bits (485), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 96/108 (88%), Positives = 99/108 (91%)

Query: 1   MSEHIKHITDASFEADVLKSDKPVLVDFWAEWCGPCKAIAPILEEVAKEYDGKLQIAKLD 60
           MSEHIKH +DA+FEADVLKSDKPVLVDFWAEWCGPCK IAPILEEVAKEY  KLQI KLD
Sbjct: 1   MSEHIKHTSDATFEADVLKSDKPVLVDFWAEWCGPCKMIAPILEEVAKEYGDKLQIVKLD 60

Query: 61  VDSNQAIPAKFGIRGIPTLILFKNGAAAAQKVGALAKGQLVSFIDSNI 108
           VDSNQA+PAK GIRGIPTLILFKNG  AAQKVGALAKGQL SFIDSNI
Sbjct: 61  VDSNQAVPAKHGIRGIPTLILFKNGVPAAQKVGALAKGQLTSFIDSNI 108


>ref|YP_001352313.1| thioredoxin [Janthinobacterium sp. Marseille]
 gb|ABR91158.1| thioredoxin [Janthinobacterium sp. Marseille]
          Length = 108

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 95/108 (87%), Positives = 102/108 (94%)

Query: 1   MSEHIKHITDASFEADVLKSDKPVLVDFWAEWCGPCKAIAPILEEVAKEYDGKLQIAKLD 60
           MSE+IKHITDASF+ DVLKSDKPVLVDFWAEWCGPCK IAPILE+VAKEY GK+QI K+D
Sbjct: 1   MSENIKHITDASFDTDVLKSDKPVLVDFWAEWCGPCKMIAPILEDVAKEYAGKIQITKMD 60

Query: 61  VDSNQAIPAKFGIRGIPTLILFKNGAAAAQKVGALAKGQLVSFIDSNI 108
           VD+NQAIPAKFGIRGIPTLILFKNGA AAQKVGALAKGQL +FIDSNI
Sbjct: 61  VDANQAIPAKFGIRGIPTLILFKNGAPAAQKVGALAKGQLTAFIDSNI 108


>ref|YP_001099027.1| thioredoxin [Herminiimonas arsenicoxydans]
 emb|CAL60900.1| thioredoxin [Herminiimonas arsenicoxydans]
          Length = 108

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 92/108 (85%), Positives = 100/108 (92%)

Query: 1   MSEHIKHITDASFEADVLKSDKPVLVDFWAEWCGPCKAIAPILEEVAKEYDGKLQIAKLD 60
           MSE+I HITDASF+ DVLKSD PVLVDFWAEWCGPCK IAPILE+VAKEY GK++IAK+D
Sbjct: 1   MSENITHITDASFDTDVLKSDTPVLVDFWAEWCGPCKMIAPILEDVAKEYAGKIRIAKMD 60

Query: 61  VDSNQAIPAKFGIRGIPTLILFKNGAAAAQKVGALAKGQLVSFIDSNI 108
           VD+NQAIPAKFGIRGIPTLILFKNG  AAQKVGALAKGQL +FIDSNI
Sbjct: 61  VDANQAIPAKFGIRGIPTLILFKNGVPAAQKVGALAKGQLTAFIDSNI 108