BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2548.p (574 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774283.1| undecaprenyl-phosphate-4-amino-L-arabinose--... 855 0.0 ref|YP_001352309.1| hypothetical protein mma_0619 [Janthinobacte... 672 0.0 ref|YP_001099023.1| hypothetical protein HEAR0702 [Herminiimonas... 662 0.0 ref|YP_004751525.1| hypothetical protein CFU_0869 [Collimonas fu... 658 0.0 ref|ZP_08275990.1| hypothetical protein IMCC9480_1289 [Oxalobact... 632 e-179 >ref|YP_003774283.1| undecaprenyl-phosphate-4-amino-L-arabinose--lipid A 4-amino-L-arabinosyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ62375.1| undecaprenyl-phosphate-4-amino-L-arabinose--lipid A 4-amino-L-arabinosyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 574 Score = 855 bits (2208), Expect = 0.0, Method: Composition-based stats. Identities = 524/572 (91%), Positives = 551/572 (96%) Query: 1 MKPVRLPAAATNALPRLAVLALALLYILPGLIGRDPWKNEDATSFGIMWTMAHGNLADWL 60 MKPVRLPAAATNALPR+A+LALALLYILPGLIGRDPWKNEDATSFGIMWTMAHGNLADWL Sbjct: 1 MKPVRLPAAATNALPRMALLALALLYILPGLIGRDPWKNEDATSFGIMWTMAHGNLADWL 60 Query: 61 TPNVAGLPLPAESPLAYWFGAICIKLFGWLLGDPLAARVSIIGCFLVGSLSIWYTTYVLG 120 TPNVAGLPLPAESPLAYWFGAICI+LFGWLLGDPLAARVS IGCFLVGSLSIWYTTY+LG Sbjct: 61 TPNVAGLPLPAESPLAYWFGAICIQLFGWLLGDPLAARVSTIGCFLVGSLSIWYTTYLLG 120 Query: 121 RRAEAQPLKLAFGGQPEPKDFGRTLADGAFLIYLGFLGLLLHSHETSPKTLQIALVAYAM 180 RR EAQPLKLAFGGQPEPKDFGRTLADGAFLIYLGFLGLLLHSHETSPKTLQIALVAYAM Sbjct: 121 RRPEAQPLKLAFGGQPEPKDFGRTLADGAFLIYLGFLGLLLHSHETSPKTLQIALVAYAM 180 Query: 181 FGAARVFDAGKLRHGIWLGLALGMLVLTYGWLLPVGVMIALVLLAALRKDGRALGLLLLL 240 +GAARVFDA ++RH + LGLALGMLVLTYGWLLPVGV++ALVLL ALRKDGRA L+L L Sbjct: 181 YGAARVFDAHRVRHALGLGLALGMLVLTYGWLLPVGVLLALVLLTALRKDGRAAALVLGL 240 Query: 241 ALPMALLISAAWVAALHRLIPAEAASQFELWLSWNIYQLNRPTLATLAFLGKYGVWFAWP 300 ALP+ALLI AAW+ ALH LIP+EAA QFELW+SWN YQLN PTLATLAFLGKYGVWFAWP Sbjct: 241 ALPLALLICAAWLLALHTLIPSEAAGQFELWMSWNTYQLNVPTLATLAFLGKYGVWFAWP 300 Query: 301 AWPFAGWALYAWRRQLGSLHIALPLAFLIPITLLILVNVHREEGMLLPLLPALAILAAFG 360 AWPFAGWALYAWRRQLGSLHIALPLAFLIPITLL+L+N+HREEGMLLPLLPALAILAAFG Sbjct: 301 AWPFAGWALYAWRRQLGSLHIALPLAFLIPITLLVLMNIHREEGMLLPLLPALAILAAFG 360 Query: 361 LPTMKRGAINAVDWFSVMTLTTSAAFIWIGWIAKETGWPAKIARNAYKLAPGFKPGFEWI 420 LPTMKRGAINAVDWFSVMTLTTSAAFIWIGWIAKETGWPA+IARNAYKLAPGFKPGF WI Sbjct: 361 LPTMKRGAINAVDWFSVMTLTTSAAFIWIGWIAKETGWPAQIARNAYKLAPGFKPGFAWI 420 Query: 421 SLAIAVAATIAWILVVHWRISRRPAVLWRAVVLSSGGVILCWVLLMTLWLPWVNYGKSYA 480 SLAIA+AATIAWI+VVHWRISRRP+VLWRAVVLSSGGVILCWVLLMTLWLPWVNYGKSYA Sbjct: 421 SLAIAIAATIAWIVVVHWRISRRPSVLWRAVVLSSGGVILCWVLLMTLWLPWVNYGKSYA 480 Query: 481 GVAEQIESKLTSVKQCVQSNVGPAQRASFAYFGNVRFADERDQSCDYLLLQDDVSNQDAS 540 GVAEQIESKL SVKQCVQ+NVGPAQRASFAYFGNVRFADE Q CDYLLLQDD+SNQDA+ Sbjct: 481 GVAEQIESKLGSVKQCVQTNVGPAQRASFAYFGNVRFADEHGQRCDYLLLQDDISNQDAA 540 Query: 541 IMLRQYPGNWRMVWEGRRPSDRDERFRLYRRA 572 +MLRQYPG WRMVWEGRRPSDRDERFRLYRR+ Sbjct: 541 LMLRQYPGAWRMVWEGRRPSDRDERFRLYRRS 572 >ref|YP_001352309.1| hypothetical protein mma_0619 [Janthinobacterium sp. Marseille] gb|ABR90404.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 578 Score = 672 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 369/571 (64%), Positives = 454/571 (79%), Gaps = 2/571 (0%) Query: 1 MKPVRLPAAATNALPRLAVLALALLYILPGLIGRDPWKNEDATSFGIMWTMAHGNLADWL 60 MKPVRLPA+AT ALPR A+ AL LLYILPGL+GRDPWK +DA FGIMWTMA G+LADWL Sbjct: 1 MKPVRLPASATLALPRWALFALCLLYILPGLVGRDPWKPDDAAGFGIMWTMATGSLADWL 60 Query: 61 TPNVAGLPLPAESPLAYWFGAICIKLFGWLLGDPLAARVSIIGCFLVGSLSIWYTTYVLG 120 +PN+ GL +P E PLA+WFGAICIKLFGWLLG P+AAR++ I FL+GS+++WYTTY+LG Sbjct: 61 SPNIVGLAMPEEGPLAFWFGAICIKLFGWLLGAPMAARLAPICFFLLGSVAVWYTTYLLG 120 Query: 121 RRAEAQPLKLAFGGQPEPKDFGRTLADGAFLIYLGFLGLLLHSHETSPKTLQIALVAYAM 180 RRAEAQPLKLAFGGQPEPKDFGRTLADGA LIYLG LGLL+HSH T+ + LQ++LVA ++ Sbjct: 121 RRAEAQPLKLAFGGQPEPKDFGRTLADGALLIYLGCLGLLVHSHGTTSEALQVSLVACSL 180 Query: 181 FGAARVFDAGKLRHGIWLGLALGMLVLTYGWLLPVGVMIALVLLAALRKDGRALGLLLLL 240 + R+F+A LR + LGLALG L LT GW+ P ++I + +LAA+R D L L+ + Sbjct: 181 YATTRLFEAHTLRRTVVLGLALGALALTRGWVTPAALLIGIAVLAAIR-DRALLPRLVFI 239 Query: 241 ALPMALLISAAWVAALHRLIPAEAASQFELWLSWNIYQLNRPTLATLAFLGKYGVWFAWP 300 ALP+A +I AW+ A ++ P + + W++WN Q++ P+++TL + K +WFAWP Sbjct: 240 ALPLAAIICGAWMWASQQVQPF-GNNPVDAWMAWNYRQVSAPSISTLQYFLKNAIWFAWP 298 Query: 301 AWPFAGWALYAWRRQLGSLHIALPLAFLIPITLLILVNVHREEGMLLPLLPALAILAAFG 360 AWPFA WA+YAWRRQ +LHI LPL F + +L L+N H EE LLPLLP LAILAAFG Sbjct: 299 AWPFAIWAVYAWRRQHAALHITLPLTFFAALLVLALLNSHGEEASLLPLLPMLAILAAFG 358 Query: 361 LPTMKRGAINAVDWFSVMTLTTSAAFIWIGWIAKETGWPAKIARNAYKLAPGFKPGFEWI 420 LPTMKRGAINAVDWFSVM LTT AAFIWIGWIAK+TGWPA++ARNA+K+APGFKP F Sbjct: 359 LPTMKRGAINAVDWFSVMMLTTCAAFIWIGWIAKQTGWPAQLARNAFKIAPGFKPEFNLF 418 Query: 421 SLAIAVAATIAWILVVHWRISRRPAVLWRAVVLSSGGVILCWVLLMTLWLPWVNYGKSYA 480 + IA AA+ WI +V+WR+SRRP+VLWRAVVLSSGG+ILCW+LLMTLWLPW NY KSY Sbjct: 419 VMLIAAAASAGWIWIVYWRVSRRPSVLWRAVVLSSGGIILCWLLLMTLWLPWGNYIKSYV 478 Query: 481 GVAEQIESKLTSVKQCVQSNVGPAQRASFAYFGNVRFADERDQSCDYLLLQDDVSNQDAS 540 GVA+QI++ L +VK+CV SNVGPAQRASFAYFG + FA +++CDYLLLQD DA+ Sbjct: 479 GVAQQIDAALPTVKRCVASNVGPAQRASFAYFGKIEFAQFGEKNCDYLLLQDAHRGNDAA 538 Query: 541 IMLRQYPGNWRMVWEGRRPSDRDERFRLYRR 571 + +Y W++VW GRRP+DRDERFRLYRR Sbjct: 539 ATVTRYNQQWQLVWHGRRPADRDERFRLYRR 569 >ref|YP_001099023.1| hypothetical protein HEAR0702 [Herminiimonas arsenicoxydans] emb|CAL60896.1| Conserved hypothetical protein, putative glycosyltransferase [Herminiimonas arsenicoxydans] Length = 578 Score = 662 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 362/571 (63%), Positives = 456/571 (79%), Gaps = 2/571 (0%) Query: 1 MKPVRLPAAATNALPRLAVLALALLYILPGLIGRDPWKNEDATSFGIMWTMAHGNLADWL 60 MKPVRLPA+AT+ALPR A+ AL LLYILPGLIGRDPWK +DA FGIMWTMAHG+L DWL Sbjct: 1 MKPVRLPASATHALPRWALFALCLLYILPGLIGRDPWKPDDAAGFGIMWTMAHGSLFDWL 60 Query: 61 TPNVAGLPLPAESPLAYWFGAICIKLFGWLLGDPLAARVSIIGCFLVGSLSIWYTTYVLG 120 PN+ GL +P E PLA+W GAICIKLFGWLLGDP+AAR++ I FL+GS S+WYTTY+LG Sbjct: 61 APNIVGLAMPDEGPLAFWLGAICIKLFGWLLGDPMAARIAPISFFLLGSTSVWYTTYLLG 120 Query: 121 RRAEAQPLKLAFGGQPEPKDFGRTLADGAFLIYLGFLGLLLHSHETSPKTLQIALVAYAM 180 RR EAQPLKLAFGGQPEP+DFGRTLADGA LIYLG LGLL+HSH T+ + LQ++L+A+++ Sbjct: 121 RRPEAQPLKLAFGGQPEPRDFGRTLADGALLIYLGCLGLLVHSHGTTTEALQVSLIAFSL 180 Query: 181 FGAARVFDAGKLRHGIWLGLALGMLVLTYGWLLPVGVMIALVLLAALRKDGRALGLLLLL 240 + R+F++ LR + GL LG+LVL+ GW++P+ + + +++LA++R+ L L+L+ Sbjct: 181 YTVTRLFESHSLRSAMAFGLVLGLLVLSRGWVVPLALWLGVLVLASIRE-RALLLRLILV 239 Query: 241 ALPMALLISAAWVAALHRLIPAEAASQFELWLSWNIYQLNRPTLATLAFLGKYGVWFAWP 300 ALP+A L++ AW+ A ++ P A + W++WN+ Q+ P+ +TL + K +WFAWP Sbjct: 240 ALPLAALVAGAWIFASQQVQPYGNAPS-DAWMAWNVRQIGMPSWSTLQYFLKNAIWFAWP 298 Query: 301 AWPFAGWALYAWRRQLGSLHIALPLAFLIPITLLILVNVHREEGMLLPLLPALAILAAFG 360 AWPFA WA+YAWRRQ +LHI LPL F + +L L+N EE +LLPLLP LAILAAFG Sbjct: 299 AWPFAIWAIYAWRRQHEALHITLPLTFFASLLVLALLNPRGEEAILLPLLPMLAILAAFG 358 Query: 361 LPTMKRGAINAVDWFSVMTLTTSAAFIWIGWIAKETGWPAKIARNAYKLAPGFKPGFEWI 420 LPTMKRGAINAVDWFSVM L+T A+FIW+GWIAK+TGWPA+IA+NA+K+APGFKP F + Sbjct: 359 LPTMKRGAINAVDWFSVMMLSTCASFIWLGWIAKQTGWPAQIAKNAFKIAPGFKPEFNLL 418 Query: 421 SLAIAVAATIAWILVVHWRISRRPAVLWRAVVLSSGGVILCWVLLMTLWLPWVNYGKSYA 480 S +A AAT WI +VHWRISRRP+VLWRAVVLSSGG+ILCW+LLMTLWLPW NY KSYA Sbjct: 419 SFIVAAAATAGWIWIVHWRISRRPSVLWRAVVLSSGGIILCWLLLMTLWLPWGNYIKSYA 478 Query: 481 GVAEQIESKLTSVKQCVQSNVGPAQRASFAYFGNVRFADERDQSCDYLLLQDDVSNQDAS 540 GVA+Q+++ L VK+CV SNVG +QRASFAYFGNV FA D++CDYLLLQD DA+ Sbjct: 479 GVAQQVDAALPKVKRCVDSNVGASQRASFAYFGNVPFARFGDKNCDYLLLQDHHRGNDAA 538 Query: 541 IMLRQYPGNWRMVWEGRRPSDRDERFRLYRR 571 + + W+++W GRRP+DRDERFRLYRR Sbjct: 539 QTITRNKLQWQLIWHGRRPADRDERFRLYRR 569 >ref|YP_004751525.1| hypothetical protein CFU_0869 [Collimonas fungivorans Ter331] gb|AEK60702.1| hypothetical protein CFU_0869 [Collimonas fungivorans Ter331] Length = 573 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 378/571 (66%), Positives = 466/571 (81%), Gaps = 2/571 (0%) Query: 1 MKPVRLPAAATNALPRLAVLALALLYILPGLIGRDPWKNEDATSFGIMWTMAHGNLADWL 60 MKPVRLPA+AT+ALPR + AL LLYILPGLIGRDPWKNEDA+SFGI WTMAHG++ADWL Sbjct: 2 MKPVRLPASATSALPRWGLWALGLLYILPGLIGRDPWKNEDASSFGIAWTMAHGSIADWL 61 Query: 61 TPNVAGLPLPAESPLAYWFGAICIKLFGWLLGDPLAARVSIIGCFLVGSLSIWYTTYVLG 120 PN+ GLP+P ESPL YW GA+ IKLFGWLLGDPLA R+ +G FLVGSLS+WY TY+LG Sbjct: 62 MPNIVGLPMPGESPLTYWIGAVFIKLFGWLLGDPLAGRLPAVGFFLVGSLSVWYATYLLG 121 Query: 121 RRAEAQPLKLAFGGQPEPKDFGRTLADGAFLIYLGFLGLLLHSHETSPKTLQIALVAYAM 180 RR+EAQPL+LAFGGQPEP+DFGRTLADGAFLIYLG LGLLL SHE + K+LQ+ALVA+++ Sbjct: 122 RRSEAQPLRLAFGGQPEPQDFGRTLADGAFLIYLGSLGLLLQSHEPTAKSLQVALVAFSI 181 Query: 181 FGAARVFDAGKLRHGIWLGLALGMLVLTYGWLLPVGVMIALVLLAALRKDGRALGLLLLL 240 + A R+F+A LR LGL+ G+L+LT GWLLP+ ++ L+ LA +R+ A +LL Sbjct: 182 YVAVRLFEARSLRSAAVLGLSFGLLILTRGWLLPLAMLCGLLTLALMREKAIARDMLLA- 240 Query: 241 ALPMALLISAAWVAALHRLIPAEAASQFELWLSWNIYQLNRPTLATLAFLGKYGVWFAWP 300 +P+ LL++A W L+P A+++F +W N+ QL+ PT L++ KYG+WFAWP Sbjct: 241 TVPVTLLVAALWFIVSWALLPG-ASARFAVWEVINLRQLSWPTWTALSYYFKYGIWFAWP 299 Query: 301 AWPFAGWALYAWRRQLGSLHIALPLAFLIPITLLILVNVHREEGMLLPLLPALAILAAFG 360 AWPFAGWA+YAWR+Q +LHIALPLAF I +T+++L+N H EEG+LLPLLP L ILAAFG Sbjct: 300 AWPFAGWAVYAWRQQRSTLHIALPLAFFISLTIILLLNPHPEEGILLPLLPPLVILAAFG 359 Query: 361 LPTMKRGAINAVDWFSVMTLTTSAAFIWIGWIAKETGWPAKIARNAYKLAPGFKPGFEWI 420 LPTMKRGAINAVDWFSVMTLT AAFIW+ WIAKE+GWPA+IA+N YKLAPGFKP F I Sbjct: 360 LPTMKRGAINAVDWFSVMTLTACAAFIWLAWIAKESGWPAQIAKNVYKLAPGFKPEFNLI 419 Query: 421 SLAIAVAATIAWILVVHWRISRRPAVLWRAVVLSSGGVILCWVLLMTLWLPWVNYGKSYA 480 +LAIA+ ++ WIL+V+WR+SRRPAVLWRAVVLSSGGVILCW+LL TLWLPW+NY KSYA Sbjct: 420 ALAIALLGSVFWILLVNWRLSRRPAVLWRAVVLSSGGVILCWLLLTTLWLPWINYSKSYA 479 Query: 481 GVAEQIESKLTSVKQCVQSNVGPAQRASFAYFGNVRFADERDQSCDYLLLQDDVSNQDAS 540 GVA QI+ L +VKQCV +NVGPAQRASFAYFG++ F + CD+LL QD++S + Sbjct: 480 GVAAQIDEHLPAVKQCVDTNVGPAQRASFAYFGDIPFGEYGQPHCDFLLYQDNISVKSDD 539 Query: 541 IMLRQYPGNWRMVWEGRRPSDRDERFRLYRR 571 + R++ GNW+++W GRRPSDRDERFRLY+R Sbjct: 540 AIWREFQGNWKLLWTGRRPSDRDERFRLYQR 570 >ref|ZP_08275990.1| hypothetical protein IMCC9480_1289 [Oxalobacteraceae bacterium IMCC9480] gb|EGF30541.1| hypothetical protein IMCC9480_1289 [Oxalobacteraceae bacterium IMCC9480] Length = 580 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 372/575 (64%), Positives = 447/575 (77%), Gaps = 4/575 (0%) Query: 1 MKPVRLPAAATNALPRLAVLALALLYILPGLIGRDPWKNEDATSFGIMWTMAHGNLADWL 60 MKPVRLPA+AT ALPRLA+ AL +LYILPGLIGRDPWK +DA FGIMWTMAHG +ADWL Sbjct: 7 MKPVRLPASATQALPRLALFALCILYILPGLIGRDPWKTDDAAGFGIMWTMAHGGIADWL 66 Query: 61 TPNVAGLPLPAESPLAYWFGAICIKLFGWLLGDPLAARVSIIGCFLVGSLSIWYTTYVLG 120 PN+ GL +P + PLA+W GAICIKLFGWLLGD LAAR++ +G FL+GS+S+W TTY+LG Sbjct: 67 WPNIVGLAMPEKGPLAFWLGAICIKLFGWLLGDALAARLATVGFFLLGSVSVWQTTYLLG 126 Query: 121 RRAEAQPLKLAFGGQPEPKDFGRTLADGAFLIYLGFLGLLLHSHETSPKTLQIALVAYAM 180 RR E QPL+LAFGGQPEP+D+GRTLADGA LIYLG LGLL+HSHETS + L +AL+ + Sbjct: 127 RRPETQPLQLAFGGQPEPRDYGRTLADGALLIYLGCLGLLVHSHETSAEALYVALMGTTL 186 Query: 181 FGAARVFDAGKLRHGIWLGLALGMLVLTYGWLLPVGVMIALVLLAALRKDGRALGLLLLL 240 + AR+ + LR + GLALG+L LT GW++P G+ I LLA R+ G L LL + Sbjct: 187 YAVARLSNRPSLRTALVAGLALGLLALTRGWVMPAGLFIGFTLLAGWRQRG-LLRWLLTV 245 Query: 241 ALPMALLISAAWVAALHRLIPAEAASQFELWLSWNIYQLNRPTLATLAFLGKYGVWFAWP 300 LP+ALL+ A+W+ + L P E S W+SWN QL PTLA L + +Y +WFAWP Sbjct: 246 TLPLALLVGASWIVLANLLQPYEG-SPASAWMSWNFDQLALPTLAGLKYFFRYTIWFAWP 304 Query: 301 AWPFAGWALYAWRRQLGSLHIALPLAFLIPITLLILVNVHREEGMLLPLLPALAILAAFG 360 AWPFAGWA+YAWR+Q G+LHI LPL ++ I LL+L+N H EG LLPLLP LAILAAFG Sbjct: 305 AWPFAGWAVYAWRKQRGALHILLPLTAVLIIVLLVLLNPHHIEGNLLPLLPPLAILAAFG 364 Query: 361 LPTMKRGAINAVDWFSVMTLTTSAAFIWIGWIAKETGWPAKIARNAYKLAPGFKPGFEWI 420 LPTMKRGAINAVDWF+VMTL+TSAAFIW+GWIAK+TGWPA++ARNA+KLAPGFKP F + Sbjct: 365 LPTMKRGAINAVDWFAVMTLSTSAAFIWVGWIAKQTGWPAQLARNAFKLAPGFKPEFNVV 424 Query: 421 SLAIAVAATIAWILVVHWRISRRPAVLWRAVVLSSGGVILCWVLLMTLWLPWVNYGKSYA 480 + +AV AT WI VVHWRISRRP+VLWRAVVLS+ GVILCW+LLMTLWLPW++YGKSYA Sbjct: 425 AFVVAVLATAGWIAVVHWRISRRPSVLWRAVVLSTAGVILCWLLLMTLWLPWLDYGKSYA 484 Query: 481 GVAEQIESKLTSVKQCVQSNVGPAQRASFAYFGNVRFADERDQSCDYLLLQDD--VSNQD 538 GVA+QI L +CV +NVGP QRA+FAYFG V FA CD+LLLQD N+D Sbjct: 485 GVAQQIAQSLPDANECVDTNVGPTQRATFAYFGKVNFAPFNGADCDFLLLQDSNRPRNKD 544 Query: 539 ASIMLRQYPGNWRMVWEGRRPSDRDERFRLYRRAG 573 A I W+++WEGRRPSDRDERFRLY+R G Sbjct: 545 AVIEPFGDGVPWKLLWEGRRPSDRDERFRLYQRIG 579