BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2536.p (216 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774273.1| hypothetical protein Hsero_0847 [Herbaspiril... 352 2e-95 ref|YP_004445553.1| hypothetical protein Halhy_0773 [Haliscomeno... 184 8e-45 ref|YP_001546381.1| hypothetical protein Haur_3617 [Herpetosipho... 171 5e-41 ref|ZP_05125326.1| conserved hypothetical protein [Rhodobacterac... 167 1e-39 ref|YP_001632117.1| hypothetical protein Bpet3506 [Bordetella pe... 167 1e-39 >ref|YP_003774273.1| hypothetical protein Hsero_0847 [Herbaspirillum seropedicae SmR1] gb|ADJ62365.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 216 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 196/216 (90%), Positives = 202/216 (93%) Query: 1 MSTTPLHTEPDHLVITAPTLKSGMVWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFY 60 MST LHT PDHLVITAPTLKSGM WVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFY Sbjct: 1 MSTIGLHTAPDHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFY 60 Query: 61 LEVITIDPNADAPERPRWFGMDHLGKDAAPRLAHWVARTSDIAAAVAASPVSPGVIEPMS 120 LEVITIDPNADAP RPRWFGMD L K A PRLAHWVARTSDIAAAVAASP+SPG+IEPMS Sbjct: 61 LEVITIDPNADAPGRPRWFGMDQLTKAAVPRLAHWVARTSDIAAAVAASPISPGMIEPMS 120 Query: 121 RGALDWLITIAADGTLACAGVMPSLIQWLSQPHPASALPDRGCRLQQLVLEHPAAQDLQA 180 RGALDWLITIAADG LAC GVMPSLIQWLSQPHPA+ALPDRGCRLQQL+LEHPAAQ LQA Sbjct: 121 RGALDWLITIAADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQA 180 Query: 181 ACRAIGLDDARIVLQEGKQASLRAVVSTPHGERVVG 216 A +AIGL DARIVL+EGKQASLRAVVSTPHGERVVG Sbjct: 181 AWQAIGLADARIVLKEGKQASLRAVVSTPHGERVVG 216 >ref|YP_004445553.1| hypothetical protein Halhy_0773 [Haliscomenobacter hydrossis DSM 1100] gb|AEE48680.1| hypothetical protein Halhy_0773 [Haliscomenobacter hydrossis DSM 1100] Length = 218 Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats. Identities = 106/215 (49%), Positives = 133/215 (61%), Gaps = 4/215 (1%) Query: 1 MSTTPLHTEPDHLVITAPTLKSGMVWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFY 60 M + +HT DHLVITAPTL+ G+ ++++ LG P+ GG H R+GTHNALL LG+ Y Sbjct: 1 MPESIVHTTLDHLVITAPTLEVGINYLQETLGA--MPQPGGIHPRMGTHNALLKLGDSCY 58 Query: 61 LEVITIDPNADAPERPRWFGMDHLGKDAAPRLAHWVARTSDIAAAVAASPVSPGVIEPMS 120 LEVI I P+ ER RWF +D L DA PRL WVART+DI A A +P G IEPMS Sbjct: 59 LEVIAIKPDEPQAERSRWFDLDKLEADALPRLRTWVARTNDITKAQALAPAWFGNIEPMS 118 Query: 121 RGALDWLITIAADGTLACAGVMPSLIQWLSQPHPASALPDRGCRLQQLVLEHPAAQDLQA 180 RG L WLI+I ADG+L G+ PSLIQWL+ PHPA+ L D C L ++ HP A + Sbjct: 119 RGDLSWLISIPADGSLPLGGICPSLIQWLNAPHPATKLSDVSCALLRVEAYHPLAAQVNE 178 Query: 181 ACRAIGLDDARIV--LQEGKQASLRAVVSTPHGER 213 IG + A V L ++ L A + TP G R Sbjct: 179 TLERIGFEGAFSVSPLHPSEKPYLLAYIQTPSGVR 213 >ref|YP_001546381.1| hypothetical protein Haur_3617 [Herpetosiphon aurantiacus DSM 785] gb|ABX06253.1| conserved hypothetical protein [Herpetosiphon aurantiacus DSM 785] Length = 215 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 105/209 (50%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Query: 5 PLHTEPDHLVITAPTLKSGMVWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFYLEVI 64 PL T DHLV+TAP L G+ ++E LGV M + GGQH + THN LL LGE YLEVI Sbjct: 3 PLATWIDHLVVTAPDLALGVAYIEDLLGVPM--QAGGQHQAMATHNCLLKLGEHCYLEVI 60 Query: 65 TIDPNADAPERPRWFGMDHLGKDAAPRLAHWVARTSDIAAAVAASPVSPGVIEPMSRGAL 124 DP AP+RPRWF +D L +APRLA WVA+T I AA GV+ PM RG L Sbjct: 61 APDPTLAAPDRPRWFALDSLQPTSAPRLATWVAQTILIQAASELLHQQLGVVTPMRRGDL 120 Query: 125 DWLITIAADGTLACAGVMPSLIQWLSQPHPASALPDRGCRLQQLVLEHPAAQDLQAACRA 184 W ITI ADG+L AGV P LI+W + HP L D+GCRL QL L HP A ++ Sbjct: 121 AWQITIPADGSLPFAGVAPMLIEWPREQHPIQRLTDQGCRLLQLELHHPQASQIEIMLSQ 180 Query: 185 IGLDDARIVLQEGKQASLRAVVSTPHGER 213 IG+ D I Q Q L A ++TP G R Sbjct: 181 IGMKDV-IRWQTAAQPQLIATIATPSGIR 208 >ref|ZP_05125326.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] gb|EEE35261.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] Length = 210 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 89/205 (43%), Positives = 123/205 (60%), Gaps = 9/205 (4%) Query: 11 DHLVITAPTLKSGMVWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFYLEVITIDPNA 70 DH+ + A +L+ G +++ LG+ M GG H+R+GTHN L+SLG+ +LE+I IDP+A Sbjct: 10 DHITVVAQSLEEGCTYIKDALGIDMPD--GGAHLRMGTHNKLMSLGDDVFLELIAIDPDA 67 Query: 71 DAPERPRWFGMDHLGKDAAPRLAHWVARTSDIAAAVAASPVSPGVIEPMSRGALDWLITI 130 AP+RPRWF +D D PRL WV T DI A +A P G ++RG L WLI+I Sbjct: 68 SAPDRPRWFNLDAFDDD--PRLGTWVVGTDDIDATLAQLPPISGPANEITRGDLTWLISI 125 Query: 131 AADGTLACAGVMPSLIQWLSQPHPASALPDRGCRLQQLVLEHPAAQDLQAACRAIG--LD 188 DGT+ G P+LI+W +PHPAS + D GCRL L +EHP A +Q IG +D Sbjct: 126 PDDGTMPLGGACPTLIEWPDRPHPASRMTDLGCRLTSLTIEHPEAGTIQG---LIGDRID 182 Query: 189 DARIVLQEGKQASLRAVVSTPHGER 213 I + +G ++A + TP G R Sbjct: 183 SDFITITDGPGMKIKASIQTPSGTR 207 >ref|YP_001632117.1| hypothetical protein Bpet3506 [Bordetella petrii DSM 12804] emb|CAP43849.1| Conserved hypothetical protein [Bordetella petrii] Length = 212 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 106/207 (51%), Positives = 130/207 (62%), Gaps = 5/207 (2%) Query: 11 DHLVITAPTLKSGMVWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFYLEVITIDPNA 70 DH+ +TAP+L G ++E LGV P+ GG H R+GTHN LL LGE YLEVI DP A Sbjct: 6 DHIAVTAPSLAIGADFIEHALGVR--PQPGGAHPRMGTHNLLLRLGESVYLEVIACDPAA 63 Query: 71 DAPERPRWFGMDHLGKDAAPRLAHWVARTSDIAAAVAASPVSPGVIEPMSRGALDWLITI 130 AP+RPRWF +D L DA PRLA WVART DIAAA + + G IEPM+RG L W ITI Sbjct: 64 PAPQRPRWFELDRLAPDAPPRLATWVARTDDIAAA-VQACAAAGQIEPMTRGELSWRITI 122 Query: 131 AADGTLACAGVMPSLIQWLSQPHPASALPDRGCRLQQLVLEHPAAQDLQAACRAIGLDDA 190 ADG+L AG P+LIQW + PHPA+ L D GC L+ L + HP Q ++A AI Sbjct: 123 PADGSLPAAGAAPTLIQWDALPHPATKLDDLGCHLEALQVFHPDPQGIRATLDAIAFAGP 182 Query: 191 RIV--LQEGKQASLRAVVSTPHGERVV 215 V L G L+A + TP G R++ Sbjct: 183 VEVRALPAGAAPRLQARIRTPRGLRML 209