BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2527.p (388 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774266.1| ferredoxin [4Fe-4S]-type protein [Herbaspiri... 645 0.0 ref|YP_004754214.1| iron-sulfur cluster-binding protein [Collimo... 531 e-149 ref|YP_001856759.1| iron-sulfur cluster binding protein [Burkhol... 494 e-137 ref|ZP_02909470.1| iron-sulfur cluster binding protein [Burkhold... 490 e-136 ref|YP_001809174.1| iron-sulfur cluster binding protein [Burkhol... 490 e-136 >ref|YP_003774266.1| ferredoxin [4Fe-4S]-type protein [Herbaspirillum seropedicae SmR1] gb|ADJ62358.1| ferredoxin [4Fe-4S]-type protein [Herbaspirillum seropedicae SmR1] Length = 347 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 323/349 (92%), Positives = 330/349 (94%), Gaps = 3/349 (0%) Query: 30 LGFAEVRIADVDLSHREAGFQAWLDKGYHGEMDYMASHGLKRARPAELVPGTVRVVSVRM 89 +GFA+VRIADVDLSHREAGFQAWLDKGYHGEMDYMASHGLKRARPAELVPGTVRVVSVRM Sbjct: 1 MGFADVRIADVDLSHREAGFQAWLDKGYHGEMDYMASHGLKRARPAELVPGTVRVVSVRM 60 Query: 90 PYLPAAADPDQPEQPDWRAREEARSADPAAAQVSIYARGRDYHKVLRARLQQLATRIEGR 149 PYLP A+ P +PDWRAREEARSADP AQVSIYARGRDYHKVLRARLQQLATRIEGR Sbjct: 61 PYLPKASGP---AEPDWRAREEARSADPGGAQVSIYARGRDYHKVLRARLQQLATRIEGR 117 Query: 150 IGPFGYRVFTDSAPVMEVALAEKAGLGWRGKHTLLLHREAGSMFFLGEMLTDLPLPVDEP 209 IGPFGYRVFTDSAPVMEVALAEKAGLGWRGKHTLLLHREAGSMFFLGEMLTDLPLPVD+P Sbjct: 118 IGPFGYRVFTDSAPVMEVALAEKAGLGWRGKHTLLLHREAGSMFFLGEMLTDLPLPVDDP 177 Query: 210 VTSHCGQCSACITACPTGAIVAPYELDARRCISYLTIELKGSIPQDLRPLIGNRIYGCDD 269 VT HCGQCSACITACPTGAIVAPYELDARRCISYLTIELKGSIP +LRPLIGNRIYGCDD Sbjct: 178 VTPHCGQCSACITACPTGAIVAPYELDARRCISYLTIELKGSIPSELRPLIGNRIYGCDD 237 Query: 270 CQLYCPWNKFAQRASLPDFDPRHGLDRASLVELFGWSEDTFLKNTEGSAIRRIGHERWLR 329 CQLYCPWNKFAQRASLPDFD RHGLD ASLV LFGWSE+ FLKNTEGSAIRRIGHERWLR Sbjct: 238 CQLYCPWNKFAQRASLPDFDVRHGLDSASLVGLFGWSEEEFLKNTEGSAIRRIGHERWLR 297 Query: 330 NLAVGLGNAADAPSHRGDAEIVAALRARLDHPSALVAEHVAWALARHGV 378 NLAVGLGNAADA SHRGDA IVAALRARL HPSALV EHV WALARHGV Sbjct: 298 NLAVGLGNAADAASHRGDAAIVAALRARLAHPSALVVEHVQWALARHGV 346 >ref|YP_004754214.1| iron-sulfur cluster-binding protein [Collimonas fungivorans Ter331] gb|AEK63391.1| Iron-sulfur cluster-binding protein [Collimonas fungivorans Ter331] Length = 368 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 265/365 (72%), Positives = 307/365 (84%), Gaps = 7/365 (1%) Query: 16 LAALAAAIKAWGRELGFAEVRIADVDLSHREAGFQAWLDKGYHGEMDYMASHGLKRARPA 75 L+ALA IKAWGRELGFA+VRI+DVDL+ +EAGF+AWL+ GYHGEMDYMA+HG+KRARPA Sbjct: 8 LSALATTIKAWGRELGFADVRISDVDLAQQEAGFEAWLELGYHGEMDYMAAHGMKRARPA 67 Query: 76 ELVPGTVRVVSVRMPYLPAAADPDQPEQPDWRAREEARSADPAA--AQVSIYARGRDYHK 133 ELVPG +R ++VRM YLP A Q +Q WR RE+AR A AA A +S+YARGRDYHK Sbjct: 68 ELVPGAIRAIAVRMDYLPRAY---QDDQGSWRPREQARLAPAAAGSATISLYARGRDYHK 124 Query: 134 VLRARLQQLATRIEGRIGPFGYRVFTDSAPVMEVALAEKAGLGWRGKHTLLLHREAGSMF 193 VLR+RLQQLA RI+G IG FGYRVFTDSAPVMEVALA+KAGLGWRGKHTLLL+REAGS F Sbjct: 125 VLRSRLQQLADRIKGEIGEFGYRVFTDSAPVMEVALAQKAGLGWRGKHTLLLNREAGSFF 184 Query: 194 FLGEMLTDLPLPVDEPVTSHCGQCSACITACPTGAIVAPYELDARRCISYLTIELKGSIP 253 FLGE+LTDLPLPVD+ ++SHCGQCSACI CPT AIV PY LDARRCISYLTIELKGSIP Sbjct: 185 FLGEILTDLPLPVDQAISSHCGQCSACIDVCPTQAIVGPYRLDARRCISYLTIELKGSIP 244 Query: 254 QDLRPLIGNRIYGCDDCQLYCPWNKFAQRASLPDFDPRHGLDRASLVELFGWSEDTFLKN 313 +LRPLIGNR+YGCDDCQL+CPWNKFAQ ++L DFD R+GLD+A+LVELFGWSE+ F Sbjct: 245 VELRPLIGNRVYGCDDCQLFCPWNKFAQPSTLGDFDVRNGLDQATLVELFGWSEEQFNSR 304 Query: 314 TEGSAIRRIGHERWLRNLAVGLGNAADAPSHRGDAEIVAALRARLDHPSALVAEHVAWAL 373 EGS IRRIG++RWLRN+AV G A + G EI+AAL+ R D+PS LV EHVAWAL Sbjct: 305 MEGSPIRRIGYQRWLRNMAV--GLGNAAAAGAGSPEIIAALQQRSDYPSELVREHVAWAL 362 Query: 374 ARHGV 378 +HG+ Sbjct: 363 QQHGI 367 >ref|YP_001856759.1| iron-sulfur cluster binding protein [Burkholderia phymatum STM815] gb|ACC69713.1| iron-sulfur cluster binding protein [Burkholderia phymatum STM815] Length = 430 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 265/390 (67%), Positives = 290/390 (74%), Gaps = 28/390 (7%) Query: 12 DPAFLAALAAAIKAWGRELGFAEVRIADVDLSHREAGFQAWLDKGYHGEMDYMASHGLKR 71 D A LAALA+ I+ WGRELGF V I+D+DLSH EAG AWLD G HGEMDYMA HG+KR Sbjct: 38 DEAQLAALASRIRDWGRELGFGAVGISDIDLSHAEAGLAAWLDAGCHGEMDYMAKHGMKR 97 Query: 72 ARPAELVPGTVRVVSVRMPYLPAAADPDQPEQP---------------DWRAREEARSAD 116 ARPAELV GT RV+SVRM YLP A P + P DWR E AR D Sbjct: 98 ARPAELVAGTRRVISVRMAYLPTHATPHAADSPAARKDAESAAADVQHDWRLEERARLND 157 Query: 117 PAAAQVSIYARGRDYHKVLRARLQQLATRIEGRIGPFGYRVFTDSAPVMEVALAEKAGLG 176 P+AA VSIYARGRDYHKV+R RLQ LA RIEG IGP+GYRVFTDSAPV+EV LA++AG G Sbjct: 158 PSAAVVSIYARGRDYHKVMRNRLQHLAERIEGEIGPYGYRVFTDSAPVLEVELAQQAGTG 217 Query: 177 WRGKHTLLLHREAGSMFFLGEMLTDLPLPVD---------EPVTSHCGQCSACITACPTG 227 WRGKHTLLL R+AGS+FFLGE+ DLPLP D E +HCG C+ CI ACPTG Sbjct: 218 WRGKHTLLLQRDAGSLFFLGEIFVDLPLPTDAETSPERAPETPGAHCGSCTRCIGACPTG 277 Query: 228 AIVAPYELDARRCISYLTIELKGSIPQDLRPLIGNRIYGCDDCQLYCPWNKFAQRASLPD 287 AIVAPY++DARRCISYLTIELKGSIPQDLRPLIGNR+YGCDDCQL CPWNKFAQ A + D Sbjct: 278 AIVAPYQVDARRCISYLTIELKGSIPQDLRPLIGNRVYGCDDCQLACPWNKFAQAAPVAD 337 Query: 288 FDPRHGLDRASLVELFGWSEDTFLKNTEGSAIRRIGHERWLRNLAVGLGNAADAPSHRGD 347 FD RHGLDRASLVELFGWS D F +GSAIRRIG+E WLRNLAVG+GNA A Sbjct: 338 FDVRHGLDRASLVELFGWSADEFDTRLQGSAIRRIGYECWLRNLAVGMGNALRAARESLP 397 Query: 348 AE----IVAALRARLDHPSALVAEHVAWAL 373 AE IV ALR R PS LV EHVAWAL Sbjct: 398 AEARAAIVDALRRRAGDPSPLVREHVAWAL 427 >ref|ZP_02909470.1| iron-sulfur cluster binding protein [Burkholderia ambifaria MEX-5] gb|EDT39394.1| iron-sulfur cluster binding protein [Burkholderia ambifaria MEX-5] Length = 411 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 268/383 (69%), Positives = 291/383 (75%), Gaps = 21/383 (5%) Query: 12 DPAFLAALAAAIKAWGRELGFAEVRIADVDLSHREAGFQAWLDKGYHGEMDYMASHGLKR 71 D A L ALA IKAWGRELGF + I+D DLS EAG AWL+ GYHGEMDYMA HG KR Sbjct: 26 DDATLTALATRIKAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGYHGEMDYMAKHGTKR 85 Query: 72 ARPAELVPGTVRVVSVRMPYLPA---AAD-PDQPEQP----DWRAREEARSADPAAAQVS 123 ARPAELV GT RV+S R+ YLPA AAD PD DWRARE AR DP AA VS Sbjct: 86 ARPAELVAGTRRVISARLAYLPAQTLAADAPDASAGALAPHDWRARERARLDDPQAAVVS 145 Query: 124 IYARGRDYHKVLRARLQQLATRIEGRIGPFGYRVFTDSAPVMEVALAEKAGLGWRGKHTL 183 IYARGRDYHKVLR RLQ LA RIEG IG FGYRVFTDSAPV+EV LA+KAG+GWRGKHTL Sbjct: 146 IYARGRDYHKVLRNRLQTLAERIEGAIGAFGYRVFTDSAPVLEVELAQKAGVGWRGKHTL 205 Query: 184 LLHREAGSMFFLGEMLTDLPLPVD---------EPVTSHCGQCSACITACPTGAIVAPYE 234 LL R+AGS+FFLGE+ D+PLP D E +HCG C+ CI ACPTGAIV PY Sbjct: 206 LLQRDAGSLFFLGEIYVDVPLPTDAQTAPDVAPETPGAHCGSCTRCIDACPTGAIVEPYR 265 Query: 235 LDARRCISYLTIELKGSIPQDLRPLIGNRIYGCDDCQLYCPWNKFAQRASLPDFDPRHGL 294 +DARRCISYLTIELKGSIP+ LRP+IGNR+YGCDDCQL CPWNKFAQ A + DFD RHGL Sbjct: 266 VDARRCISYLTIELKGSIPEPLRPMIGNRVYGCDDCQLVCPWNKFAQAAPVADFDVRHGL 325 Query: 295 DRASLVELFGWSEDTFLKNTEGSAIRRIGHERWLRNLAVGLGNAADAPSHR--GDAE--I 350 DRA+LVELFGW DTF +GSAIRRIGHE WLRNLAVGLGNA AP+ R DA I Sbjct: 326 DRATLVELFGWDADTFDTRMQGSAIRRIGHESWLRNLAVGLGNALRAPADRLAPDARDAI 385 Query: 351 VAALRARLDHPSALVAEHVAWAL 373 VAALRAR D PS +V EHV WAL Sbjct: 386 VAALRARADDPSPIVREHVEWAL 408 >ref|YP_001809174.1| iron-sulfur cluster binding protein [Burkholderia ambifaria MC40-6] gb|ACB64958.1| iron-sulfur cluster binding protein [Burkholderia ambifaria MC40-6] Length = 411 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 263/383 (68%), Positives = 286/383 (74%), Gaps = 21/383 (5%) Query: 12 DPAFLAALAAAIKAWGRELGFAEVRIADVDLSHREAGFQAWLDKGYHGEMDYMASHGLKR 71 D A L ALA IKAWGRELGF + I+D DLS EAG AWL+ GYHGEMDYMA HG KR Sbjct: 26 DDATLTALATRIKAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGYHGEMDYMAKHGTKR 85 Query: 72 ARPAELVPGTVRVVSVRMPYLPAA--------ADPDQPEQPDWRAREEARSADPAAAQVS 123 ARPAELV GT RV+S R+ YLPA A P DWRARE AR DP AA VS Sbjct: 86 ARPAELVAGTRRVISARLAYLPAQTLAADAPDASPGALVPHDWRAREHARLDDPQAAVVS 145 Query: 124 IYARGRDYHKVLRARLQQLATRIEGRIGPFGYRVFTDSAPVMEVALAEKAGLGWRGKHTL 183 IYARGRDYHKVLR RLQ LA RIE IG FGYRVFTDSAPV+EV LA+KAG+GWRGKHTL Sbjct: 146 IYARGRDYHKVLRNRLQTLAERIEREIGAFGYRVFTDSAPVLEVELAQKAGVGWRGKHTL 205 Query: 184 LLHREAGSMFFLGEMLTDLPLPVD---------EPVTSHCGQCSACITACPTGAIVAPYE 234 LL R+AGS+FFLGE+ D+PLP D E +HCG C+ CI ACPTGAIV PY Sbjct: 206 LLQRDAGSLFFLGEIYVDIPLPTDAQTAPDVAPETPGAHCGSCTRCIDACPTGAIVEPYR 265 Query: 235 LDARRCISYLTIELKGSIPQDLRPLIGNRIYGCDDCQLYCPWNKFAQRASLPDFDPRHGL 294 +DARRCISYLTIELKGSIP+ LRP+IGNR+YGCDDCQL CPWNKFAQ A + DFD RHGL Sbjct: 266 VDARRCISYLTIELKGSIPEPLRPMIGNRVYGCDDCQLVCPWNKFAQAAPVADFDVRHGL 325 Query: 295 DRASLVELFGWSEDTFLKNTEGSAIRRIGHERWLRNLAVGLGNAADAPSHRGDAE----I 350 DRA+LVELFGW DTF +GSAIRRIGHE WLRNLAVGLGNA AP+ R E I Sbjct: 326 DRATLVELFGWDADTFDTRMQGSAIRRIGHESWLRNLAVGLGNALRAPADRLAPEARDAI 385 Query: 351 VAALRARLDHPSALVAEHVAWAL 373 VAALRAR D PS +V EHV WAL Sbjct: 386 VAALRARADDPSPIVREHVEWAL 408