BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2525.p (228 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774263.1| DedA DSG-1 transmembrane protein [Herbaspiri... 377 e-102 ref|YP_004754217.1| DedA protein [Collimonas fungivorans Ter331]... 298 5e-79 ref|YP_002006535.1| hypothetical protein RALTA_A2543 [Cupriavidu... 276 2e-72 ref|YP_001098756.1| DedA family protein [Herminiimonas arsenicox... 275 5e-72 ref|YP_001352153.1| membrane-associated protein dedA [Janthinoba... 273 2e-71 >ref|YP_003774263.1| DedA DSG-1 transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62355.1| DedA DSG-1 transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 220 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 204/220 (92%), Positives = 210/220 (95%) Query: 9 MDYLQWLDVLVHVDKYLGVLIEQYGPLIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTF 68 MDYLQ LDVLVHVDKYLGVLIEQYG LIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTF Sbjct: 1 MDYLQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTF 60 Query: 69 CALGAMDIWLLMGLLIAAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPDALRKTHTFYEKH 128 CA GAMDIWLLM LL+ AAVAGNTLNYWIGGWVGQRVYTHNYRWLNP+ALRKTH FYEKH Sbjct: 61 CATGAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKH 120 Query: 129 GGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVSLVVLGYLFGNIPVV 188 GGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVV LVVLGYLFGNIPVV Sbjct: 121 GGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVV 180 Query: 189 RENLNTLVLIGIVGAIVPIVLGALWQLWRKLRGKRKVSNA 228 ++NLNTLVLIGIV A+ PIVLG LWQ+WRKLRGKRKVSNA Sbjct: 181 QQNLNTLVLIGIVAAVFPIVLGGLWQIWRKLRGKRKVSNA 220 >ref|YP_004754217.1| DedA protein [Collimonas fungivorans Ter331] gb|AEK63394.1| DedA protein [Collimonas fungivorans Ter331] Length = 215 Score = 298 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 144/213 (67%), Positives = 180/213 (84%) Query: 9 MDYLQWLDVLVHVDKYLGVLIEQYGPLIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTF 68 MD++Q++D+++HVDK LG LI++YG LIY VLFLIVFCETGLVVLPFLPGD+LLFI G F Sbjct: 1 MDFMQFVDIILHVDKSLGFLIKEYGALIYIVLFLIVFCETGLVVLPFLPGDTLLFIGGAF 60 Query: 69 CALGAMDIWLLMGLLIAAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPDALRKTHTFYEKH 128 CA G M+IW LMGLLI AA GNTLNYWIG +G +VYTH+YRWL+ AL+KTH FYE H Sbjct: 61 CANGEMNIWALMGLLIVAATTGNTLNYWIGSLIGHKVYTHDYRWLDKKALQKTHAFYEHH 120 Query: 129 GGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVSLVVLGYLFGNIPVV 188 GGKTI+++RF PIVRTFAPF+AGVS M+F++FQ FN+ GA +WVV LV GY FGNIPV+ Sbjct: 121 GGKTIILSRFVPIVRTFAPFVAGVSEMTFSKFQFFNITGALIWVVGLVSAGYFFGNIPVI 180 Query: 189 RENLNTLVLIGIVGAIVPIVLGALWQLWRKLRG 221 R++LNT+VLIG+ A+VP+ LG LW+ ++K+RG Sbjct: 181 RDHLNTIVLIGVGAAVVPVALGGLWKFYKKMRG 213 >ref|YP_002006535.1| hypothetical protein RALTA_A2543 [Cupriavidus taiwanensis LMG 19424] emb|CAQ70474.1| conserved hypothetical protein, dedA family; putative integral membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 221 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 141/213 (66%), Positives = 177/213 (83%), Gaps = 3/213 (1%) Query: 12 LQWLDVLVHVDKYLGVLIEQYGPLIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCAL 71 LQ +D+LVHVDKYLG +I+QYG +YA+LFLIVF ETGLVVLPFLPGDSLLFIAG FCA Sbjct: 5 LQLIDMLVHVDKYLGTVIDQYGHWVYAILFLIVFAETGLVVLPFLPGDSLLFIAGAFCAT 64 Query: 72 GAMDIWLLMGLLIAAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPDALRKTHTFYEKHGGK 131 GAM+ W L+GLL+ AA++GNT+NY +G W+G +V+ H +R+L+ DALR+TH FYE+HGGK Sbjct: 65 GAMNEWGLIGLLLVAAISGNTVNYMVGNWIGPKVFDHQWRFLDQDALRRTHDFYERHGGK 124 Query: 132 TIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVSLVVLGYLFGNIPVVREN 191 T+V+ARF PIVRTFAPF+AGVS M+FARFQ+FNV+GA WVV LV GY FGN+P V++ Sbjct: 125 TLVMARFVPIVRTFAPFVAGVSQMTFARFQMFNVIGALAWVVGLVFAGYFFGNLPFVKQY 184 Query: 192 LNTLVLIGIVGAIVPIVLGALWQLWRKLRGKRK 224 LN +VL GI A+VP+VLG LW+L +RG R+ Sbjct: 185 LNLIVLAGIGAAVVPLVLGGLWKL---VRGNRR 214 >ref|YP_001098756.1| DedA family protein [Herminiimonas arsenicoxydans] emb|CAL60627.1| Protein DedA [Herminiimonas arsenicoxydans] Length = 213 Score = 275 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 139/212 (65%), Positives = 178/212 (83%) Query: 9 MDYLQWLDVLVHVDKYLGVLIEQYGPLIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTF 68 MD++Q+ D+++HVDKYLG I QYG LIY VLF I+FCETGLVV PFLPGD+LLFIAG F Sbjct: 1 MDFMQFFDMILHVDKYLGTFIAQYGALIYLVLFTIIFCETGLVVFPFLPGDTLLFIAGAF 60 Query: 69 CALGAMDIWLLMGLLIAAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPDALRKTHTFYEKH 128 CA G M++WLL+ LLI AA+ GNT+NYWIG +G++V+TH+YRWL+ AL+KTH+FYE H Sbjct: 61 CASGGMNLWLLLSLLIVAAILGNTVNYWIGQRIGEKVFTHDYRWLDRAALQKTHSFYENH 120 Query: 129 GGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVSLVVLGYLFGNIPVV 188 GGKT+++ARF PIVRTFAPF+AGVS M+F RFQ FNV GA LWV LVV GYLFGNIP++ Sbjct: 121 GGKTLILARFLPIVRTFAPFVAGVSKMTFVRFQFFNVTGAVLWVALLVVGGYLFGNIPII 180 Query: 189 RENLNTLVLIGIVGAIVPIVLGALWQLWRKLR 220 R++LNT+VL+G+ A +P+ LGALW+L ++ + Sbjct: 181 RDHLNTIVLVGVGAAAIPVALGALWKLAQRFK 212 >ref|YP_001352153.1| membrane-associated protein dedA [Janthinobacterium sp. Marseille] gb|ABR89242.1| membrane-associated protein dedA [Janthinobacterium sp. Marseille] Length = 214 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 144/214 (67%), Positives = 182/214 (85%) Query: 9 MDYLQWLDVLVHVDKYLGVLIEQYGPLIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTF 68 MD++Q+ D+++HVDKYLG I QYG LIY VLF I+F ETGLVV P LPGD+LLFIAG F Sbjct: 1 MDFMQFFDMILHVDKYLGTFIAQYGMLIYVVLFAIIFSETGLVVFPLLPGDTLLFIAGAF 60 Query: 69 CALGAMDIWLLMGLLIAAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPDALRKTHTFYEKH 128 CA G+M++WLL+GLL+AAA+ GNT+NYWIG +G++V+TH+YRWL+ DALRKTHTFYEKH Sbjct: 61 CASGSMNLWLLLGLLMAAAILGNTVNYWIGHAIGEKVFTHDYRWLDRDALRKTHTFYEKH 120 Query: 129 GGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVSLVVLGYLFGNIPVV 188 GGKT+++ARF PI RTFAPFIAGVS M+F RFQLFN +GA LWV LVV GYLFGNIP++ Sbjct: 121 GGKTLILARFIPIARTFAPFIAGVSEMTFFRFQLFNCIGAVLWVGLLVVGGYLFGNIPII 180 Query: 189 RENLNTLVLIGIVGAIVPIVLGALWQLWRKLRGK 222 R++LNT+VLIG+ A VP+ LGALW++ ++ + K Sbjct: 181 RDHLNTIVLIGVGAAAVPVALGALWKVLQRFKNK 214