BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2521.p (361 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774259.1| tRNA delta2-isopentenylpyrophosphate transfe... 503 e-140 ref|YP_001352151.1| tRNA delta(2)-isopentenylpyrophosphate trans... 419 e-115 ref|ZP_04579062.1| tRNA delta(2)-isopentenylpyrophosphate transf... 418 e-115 ref|YP_004754219.1| tRNA delta(2)-isopentenylpyrophosphate trans... 417 e-114 ref|YP_001098754.1| tRNA delta(2)-isopentenylpyrophosphate trans... 408 e-112 >ref|YP_003774259.1| tRNA delta2-isopentenylpyrophosphate transferase [Herbaspirillum seropedicae SmR1] gb|ADJ62351.1| tRNA delta2-isopentenylpyrophosphate transferase protein [Herbaspirillum seropedicae SmR1] Length = 315 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 279/310 (90%), Positives = 296/310 (95%) Query: 46 QQLPLAVAIMGPTASGKTAAALEIARHLPCEIISVDSALVYREMDVGTAKPSPEELAAVP 105 Q LPLAV+IMGPTASGKTAAALEIARHLPCEIISVDSALVYREMD+GTAKP+P ELA VP Sbjct: 4 QTLPLAVSIMGPTASGKTAAALEIARHLPCEIISVDSALVYREMDIGTAKPTPAELAQVP 63 Query: 106 HHLIDIIDPTEAYSAMQFRQDALRLTLEIASRGKLPLLVGGTMLYFKVLRDGLDELPQAD 165 HHLIDIIDPTEAYSAMQFRQDALRLT EI +RG+LPLLVGGTMLYFKVLRDGLDELPQAD Sbjct: 64 HHLIDIIDPTEAYSAMQFRQDALRLTQEIIARGRLPLLVGGTMLYFKVLRDGLDELPQAD 123 Query: 166 PALRAQLDEEAARIGMPAMHARLATLDPVTAARLKPTDSQRIQRALEISLLTGQPMSSLL 225 PALRAQLDEEAAR+GMPAMHARLA LDPVTAARLKP DSQRIQRALEISLLTGQPMS+LL Sbjct: 124 PALRAQLDEEAARVGMPAMHARLAELDPVTAARLKPNDSQRIQRALEISLLTGQPMSALL 183 Query: 226 SQKPPEPLPFEMLPLALEPADRAVLHERIALRFDLMLRGGALEREVAALRARGDLHLGLP 285 +QKP EPLP +LPLALEP++RA+LH+RIALRFDLMLR G LEREV ALRARGDLHLGLP Sbjct: 184 AQKPAEPLPMRLLPLALEPSERAILHDRIALRFDLMLRDGGLEREVRALRARGDLHLGLP 243 Query: 286 SMRCVGYRQMWEYLDGSIDATALREKGIAATRQLAKRQLTWLRSMPERISIDCNRPEATA 345 SMRCVGYRQMWEYLDGSIDA A+REKGIAATRQLAKRQLTWLRSMPERISIDCNRPEATA Sbjct: 244 SMRCVGYRQMWEYLDGSIDAAAMREKGIAATRQLAKRQLTWLRSMPERISIDCNRPEATA 303 Query: 346 EVLARVQQAL 355 EVLARV++A+ Sbjct: 304 EVLARVREAV 313 >ref|YP_001352151.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Janthinobacterium sp. Marseille] sp|A6SV54|MIAA_JANMA RecName: Full=tRNA dimethylallyltransferase; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase gb|ABR88416.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Janthinobacterium sp. Marseille] Length = 314 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 230/312 (73%), Positives = 262/312 (83%), Gaps = 2/312 (0%) Query: 49 PLAVAIMGPTASGKTAAALEIARHLPCEIISVDSALVYREMDVGTAKPSPEELAAVPHHL 108 PL V+IMGPTASGKTAAAL +A +P EIISVDSALVYREMD+GTAKPS EELA VPHHL Sbjct: 5 PLVVSIMGPTASGKTAAALAVAEKIPAEIISVDSALVYREMDIGTAKPSAEELAQVPHHL 64 Query: 109 IDIIDPTEAYSAMQFRQDALRLTLEIASRGKLPLLVGGTMLYFKVLRDGLDELPQADPAL 168 IDI+DP ++YS MQFRQDA+RL EI++RGKLPLLVGGTMLYFK L+DGLD LPQAD AL Sbjct: 65 IDILDPLDSYSVMQFRQDAIRLAAEISARGKLPLLVGGTMLYFKGLKDGLDALPQADAAL 124 Query: 169 RAQLDEEAARIGMPAMHARLATLDPVTAARLKPTDSQRIQRALEISLLTGQPMSSLLSQK 228 RA+LD EAA IG PAMHA+LA LDP+TA RLKP DSQRIQRALEI LTGQPMS+LL+Q Sbjct: 125 RAELDAEAAAIGYPAMHAKLAALDPITAERLKPNDSQRIQRALEIIALTGQPMSALLAQA 184 Query: 229 PPEPLPFEMLPLALEPADRAVLHERIALRFDLMLRGGALEREVAALRARGDLHLGLPSMR 288 P LPF +LP+ALEP+DR+VLH RIA RFD ML+GGAL EV ALRARGDLHLGLPSMR Sbjct: 185 PKTELPFTLLPIALEPSDRSVLHTRIATRFDAMLKGGALLDEVKALRARGDLHLGLPSMR 244 Query: 289 CVGYRQMWEYLDGSIDATALREKGIAATRQLAKRQLTWLRSMPERISIDCNRPEATAEVL 348 CVGYRQ WEYLDG+ LRE+GIAATRQLAKRQLTWLRSM +R IDC P+A+ +L Sbjct: 245 CVGYRQSWEYLDGAYSLAELRERGIAATRQLAKRQLTWLRSMDDRHIIDCLAPDASGAIL 304 Query: 349 ARVQQALAERRA 360 +++ +A+ RA Sbjct: 305 QQIE--IAQNRA 314 >ref|ZP_04579062.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Oxalobacter formigenes OXCC13] gb|EEO30035.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Oxalobacter formigenes OXCC13] Length = 312 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 219/312 (70%), Positives = 255/312 (81%) Query: 44 MTQQLPLAVAIMGPTASGKTAAALEIARHLPCEIISVDSALVYREMDVGTAKPSPEELAA 103 MT P+ +AIMGPTASGKTAAAL+IA+++P EIISVDSALVYREMD+GTAKPS EE A+ Sbjct: 1 MTDTRPIIIAIMGPTASGKTAAALDIAQNIPSEIISVDSALVYREMDIGTAKPSQEERAS 60 Query: 104 VPHHLIDIIDPTEAYSAMQFRQDALRLTLEIASRGKLPLLVGGTMLYFKVLRDGLDELPQ 163 VPHHLIDIIDP++ YS QFR+D LRL EI RGKLPLLVGGTMLYFK L GLD+LP Sbjct: 61 VPHHLIDIIDPSQTYSVAQFREDTLRLITEIRQRGKLPLLVGGTMLYFKGLTSGLDDLPG 120 Query: 164 ADPALRAQLDEEAARIGMPAMHARLATLDPVTAARLKPTDSQRIQRALEISLLTGQPMSS 223 A+P +RA+LDEEAA+IG P MHA+L++LDPVTA RLKP D+QRIQRALEI LTG+P+S Sbjct: 121 ANPEIRAKLDEEAAQIGWPGMHAKLSSLDPVTADRLKPNDAQRIQRALEIIELTGKPLSE 180 Query: 224 LLSQKPPEPLPFEMLPLALEPADRAVLHERIALRFDLMLRGGALEREVAALRARGDLHLG 283 L S + PF+++P+ALEP+DR+ LHERIALRFD ML+ L EV LR RGDLH G Sbjct: 181 LHSGQQARSFPFDIIPIALEPSDRSKLHERIALRFDQMLKDDLLIEEVRKLRERGDLHPG 240 Query: 284 LPSMRCVGYRQMWEYLDGSIDATALREKGIAATRQLAKRQLTWLRSMPERISIDCNRPEA 343 +PSMRCVGYRQ WEYLDG D ALREKGIAATRQLAKRQLTWLRSMPERISIDC P A Sbjct: 241 MPSMRCVGYRQTWEYLDGEFDRKALREKGIAATRQLAKRQLTWLRSMPERISIDCLSPNA 300 Query: 344 TAEVLARVQQAL 355 ++++ V+ AL Sbjct: 301 LSDIMTHVENAL 312 >ref|YP_004754219.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Collimonas fungivorans Ter331] gb|AEK63396.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Collimonas fungivorans Ter331] Length = 353 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 235/312 (75%), Positives = 259/312 (83%), Gaps = 2/312 (0%) Query: 49 PLAVAIMGPTASGKTAAALEIARHLPCEIISVDSALVYREMDVGTAKPSPEELAAVPHHL 108 PL +AIMGPTASGKTAAALEIARH+P EIISVDSALVYR MD+GTAKPS +ELAA PHHL Sbjct: 42 PLVIAIMGPTASGKTAAALEIARHIPSEIISVDSALVYRGMDIGTAKPSRDELAAAPHHL 101 Query: 109 IDIIDPTEAYSAMQFRQDALRLTLEIASRGKLPLLVGGTMLYFKVLRDGLDELPQADPAL 168 IDI++PT++YSAMQFR DALRL+ EI +RGKL L+VGGTMLYFK LRDGLD+LPQADPAL Sbjct: 102 IDIMEPTQSYSAMQFRDDALRLSAEIHARGKLVLMVGGTMLYFKALRDGLDDLPQADPAL 161 Query: 169 RAQLDEEAARIGMPAMHARLATLDPVTAARLKPTDSQRIQRALEISLLTGQPMSSLLSQK 228 RA+LD EAA IG+P MHA+LA LDPVTAARLKP DSQRIQRALEI L+GQ MSSLL+ + Sbjct: 162 RARLDAEAALIGVPGMHAKLAQLDPVTAARLKPNDSQRIQRALEIIELSGQTMSSLLTDR 221 Query: 229 PPEPLPFEMLPLALEPADRAVLHERIALRFDLML--RGGALEREVAALRARGDLHLGLPS 286 P LPF+MLP+ALEP+DR+VLHERIA RFDLML + G L EV LRARGDLHLGLPS Sbjct: 222 PAPELPFDMLPIALEPSDRSVLHERIARRFDLMLDPQSGGLIGEVETLRARGDLHLGLPS 281 Query: 287 MRCVGYRQMWEYLDGSIDATALREKGIAATRQLAKRQLTWLRSMPERISIDCNRPEATAE 346 MRCVGYRQ WEYLDG LREKGIAATRQLAKRQLTWLRSMPER IDC Sbjct: 282 MRCVGYRQTWEYLDGLYGYQELREKGIAATRQLAKRQLTWLRSMPERTVIDCIGDRVADT 341 Query: 347 VLARVQQALAER 358 VL V AL +R Sbjct: 342 VLETVTTALKQR 353 >ref|YP_001098754.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Herminiimonas arsenicoxydans] sp|A4G288|MIAA_HERAR RecName: Full=tRNA dimethylallyltransferase; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase emb|CAL60625.1| tRNA delta(2)-isopentenylpyrophosphate transferase (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) [Herminiimonas arsenicoxydans] Length = 320 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 223/306 (72%), Positives = 252/306 (82%) Query: 49 PLAVAIMGPTASGKTAAALEIARHLPCEIISVDSALVYREMDVGTAKPSPEELAAVPHHL 108 PL V+IMGPTASGKTA AL IA +P EIISVDSALVYREM++GTAKP+ EE A+VPHHL Sbjct: 10 PLVVSIMGPTASGKTATALAIAEQIPSEIISVDSALVYREMNIGTAKPTDEERASVPHHL 69 Query: 109 IDIIDPTEAYSAMQFRQDALRLTLEIASRGKLPLLVGGTMLYFKVLRDGLDELPQADPAL 168 IDI+DP +AYS MQFRQDALRL EI++RGKL LLVGGTMLYFK L+DGLD LPQAD AL Sbjct: 70 IDILDPLDAYSVMQFRQDALRLVAEISARGKLALLVGGTMLYFKGLKDGLDALPQADAAL 129 Query: 169 RAQLDEEAARIGMPAMHARLATLDPVTAARLKPTDSQRIQRALEISLLTGQPMSSLLSQK 228 RA+LD EAA IG PAMHA+LA LDP+TAARLKP D+QRIQRALEI LTGQPMS+LL+Q Sbjct: 130 RAELDAEAALIGSPAMHAKLAKLDPITAARLKPNDTQRIQRALEIITLTGQPMSALLAQA 189 Query: 229 PPEPLPFEMLPLALEPADRAVLHERIALRFDLMLRGGALEREVAALRARGDLHLGLPSMR 288 P LPF +LP+ALEP++R+VLH RIA RFD ML+ G L EV ALRARGDLH GLPSMR Sbjct: 190 PKSELPFTLLPIALEPSERSVLHARIATRFDAMLKDGGLLDEVRALRARGDLHPGLPSMR 249 Query: 289 CVGYRQMWEYLDGSIDATALREKGIAATRQLAKRQLTWLRSMPERISIDCNRPEATAEVL 348 CVGYRQ WEYLDG+ LREKGIAATRQLAKRQLTWLR MPER +IDC P+ +L Sbjct: 250 CVGYRQSWEYLDGAYGLAELREKGIAATRQLAKRQLTWLRGMPERQTIDCLAPDVAGSIL 309 Query: 349 ARVQQA 354 ++ A Sbjct: 310 RKIVSA 315