BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2518.p (414 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774157.1| N-acyl-D-glucosamine 2-epimerase [Herbaspiri... 582 e-164 ref|YP_004148041.1| N-acylglucosamine 2-epimerase [Pseudoxanthom... 381 e-103 ref|ZP_08184565.1| N-acyl-D-glucosamine 2-epimerase [Xanthomonas... 361 2e-97 ref|ZP_02372429.1| N-acylglucosamine 2-epimerase (GlcNAc 2-epime... 354 2e-95 ref|YP_440857.1| N-acylglucosamine 2-epimerase family protein [B... 354 2e-95 >ref|YP_003774157.1| N-acyl-D-glucosamine 2-epimerase [Herbaspirillum seropedicae SmR1] gb|ADJ62249.1| N-acyl-D-glucosamine 2-epimerase (AGE domain) protein [Herbaspirillum seropedicae SmR1] Length = 396 Score = 582 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 296/394 (75%), Positives = 323/394 (81%) Query: 19 MSLPDLESRAFLQAHVADTLAFYDRHAIDPEGGFFHYLKDDGSVYERSHRHLVSATRLVF 78 M PD ESR FL AHVADTLAFYDRHAIDP GGFFHYLKD+G VY HRHLVSATRLVF Sbjct: 1 MPQPDFESRRFLHAHVADTLAFYDRHAIDPLGGFFHYLKDNGRVYNAGHRHLVSATRLVF 60 Query: 79 TQSMAYLHTGQSRYLEQTRHALAHLQRFRHAGGPLAGLYAWTLRDGQIEDGTVMAYGQAF 138 TQ+MAY H+G +RYL Q R A L RFRHA GPL GLYAWTL+D +IED TVMAYGQAF Sbjct: 61 TQTMAYTHSGHTRYLRQARRAWDELARFRHASGPLQGLYAWTLQDERIEDATVMAYGQAF 120 Query: 139 VLLAFAQAHRVGLCDAQQVAQAYERMESAFFEPAHEAYADEITPSGELIPYRGQNANMHM 198 VLLA A AHR+GLC VA A+ERME+AFFEPAH+AYADEITP+GELI YRGQNANMHM Sbjct: 121 VLLACAHAHRIGLCGEDAVADAFERMETAFFEPAHQAYADEITPAGELIGYRGQNANMHM 180 Query: 199 CEACLAAHVATGDAVYLERAQLLIERFVFGLARQSQDLVWEHYRQDWSLDHDYNRGNRDN 258 CEACL+A+ TG YLERA LIERFVF LA+ +Q LVWEHY QDW+ D DYN+G R N Sbjct: 181 CEACLSAYEVTGQRRYLERALALIERFVFDLAQHTQGLVWEHYHQDWTPDLDYNKGKRSN 240 Query: 259 IFKPWGFQTGHQTEWAKLLLIAHAQEPRPAYVTRAAELQDAAWQHGWDALYGGLIYGFDP 318 IFKPWGFQTGHQTEWAKLLLIAH P A++ RA EL AAW +GWD+++GGLIYGF Sbjct: 241 IFKPWGFQTGHQTEWAKLLLIAHGHAPNAAFLPRAIELHQAAWTYGWDSIHGGLIYGFGL 300 Query: 319 DLRPYDTDKYFWVQAESFASAWRLWRVTGEERFRQQYHAIWAWSWAHLVDHHHGAWFRIL 378 + PYD DKYFWVQAESFASAWRLWR TGE FR QY +WAWSW H+VDH HGAWFRIL Sbjct: 301 EREPYDRDKYFWVQAESFASAWRLWRATGEPAFRDQYRMLWAWSWQHMVDHEHGAWFRIL 360 Query: 379 AADGSKLEDTKSPAGKVDYHTMGACWDVMEAGGL 412 AADGSKLEDTKSPAGKVDYHTMGACWDV+ GGL Sbjct: 361 AADGSKLEDTKSPAGKVDYHTMGACWDVLAVGGL 394 >ref|YP_004148041.1| N-acylglucosamine 2-epimerase [Pseudoxanthomonas suwonensis 11-1] gb|ADV28810.1| N-acylglucosamine 2-epimerase [Pseudoxanthomonas suwonensis 11-1] Length = 399 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 211/386 (54%), Positives = 252/386 (65%), Gaps = 3/386 (0%) Query: 23 DLESRAFLQAHVADTLAFYDRHAIDPEGGFFHYLKDDGSVYERSHRHLVSATRLVFTQSM 82 D SR FL HV DT+AFY IDP+GGFF + +DDG VY+R RHLVS+TR VF SM Sbjct: 13 DFRSREFLLGHVRDTMAFYHPRCIDPDGGFFQFFRDDGQVYDRHTRHLVSSTRFVFNYSM 72 Query: 83 AYLHTGQSRYLEQTRHALAHLQRFRHAGGPLAGLYAWTLRDGQIEDGTVMAYGQAFVLLA 142 A+ G Y E +H + L+ P G YAW LRD + D T YG AFV+LA Sbjct: 73 AFQAFGDPAYREAVKHGVDFLREVHR--NPETGGYAWLLRDRDVIDATNHCYGLAFVVLA 130 Query: 143 FAQAHRVGLCDAQQ-VAQAYERMESAFFEPAHEAYADEITPSGELIPYRGQNANMHMCEA 201 +A+A G +A+ +A+ +E ME F+EPAH YADE L PYRGQNANMH CEA Sbjct: 131 YAKALEAGFEEARGWIAETWELMERHFWEPAHGLYADEADAQWNLAPYRGQNANMHACEA 190 Query: 202 CLAAHVATGDAVYLERAQLLIERFVFGLARQSQDLVWEHYRQDWSLDHDYNRGNRDNIFK 261 LAA+ ATG+A YLERA L A + LVWEHY DWS+D DYNRG+R NIF+ Sbjct: 191 WLAAYEATGEARYLERAATLAANMTRRQAALAGGLVWEHYHADWSVDWDYNRGDRSNIFR 250 Query: 262 PWGFQTGHQTEWAKLLLIAHAQEPRPAYVTRAAELQDAAWQHGWDALYGGLIYGFDPDLR 321 PWGFQ GHQTEWAKLLLI P ++ RA EL D A WD ++GGL+YG DPD Sbjct: 251 PWGFQPGHQTEWAKLLLILDRHAPADWHLPRARELFDRAVAMAWDPVHGGLVYGNDPDGA 310 Query: 322 PYDTDKYFWVQAESFASAWRLWRVTGEERFRQQYHAIWAWSWAHLVDHHHGAWFRILAAD 381 YD DKYFWVQAES A+A L + TGE R+ Y +W++SW H VDH HGAW+RIL D Sbjct: 311 VYDADKYFWVQAESLATAALLAQRTGEARYWDWYERLWSYSWTHFVDHRHGAWYRILGPD 370 Query: 382 GSKLEDTKSPAGKVDYHTMGACWDVM 407 SKL D KSPAGK DYHTMGAC++V+ Sbjct: 371 NSKLSDEKSPAGKTDYHTMGACYEVL 396 >ref|ZP_08184565.1| N-acyl-D-glucosamine 2-epimerase [Xanthomonas gardneri ATCC 19865] gb|EGD17801.1| N-acyl-D-glucosamine 2-epimerase [Xanthomonas gardneri ATCC 19865] Length = 401 Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats. Identities = 195/387 (50%), Positives = 251/387 (64%), Gaps = 3/387 (0%) Query: 22 PDLESRAFLQAHVADTLAFYDRHAIDPEGGFFHYLKDDGSVYERSHRHLVSATRLVFTQS 81 PD S L+ H+ADT+AFY AIDP GGFFHY +DDG++Y+ HRHLVS+TR VF + Sbjct: 10 PDFRSADVLRQHIADTMAFYHPRAIDPAGGFFHYFRDDGTIYDAGHRHLVSSTRFVFNYA 69 Query: 82 MAYLHTGQSRYLEQTRHALAHLQRFRHAGGPLAGLYAWTLRDGQIEDGTVMAYGQAFVLL 141 MAY G ++YLE RH L +L+ P G YAWTLRDG +ED YG AFVLL Sbjct: 70 MAYREFGDAQYLEAVRHGLDYLRNVHR--NPATGGYAWTLRDGLVEDDMNHCYGVAFVLL 127 Query: 142 AFAQAHRVGLCDAQQ-VAQAYERMESAFFEPAHEAYADEITPSGELIPYRGQNANMHMCE 200 A++ + G+ +A+ + + ++ +E F+EP Y DE YRGQNANMHMCE Sbjct: 128 AYSCGLKAGIEEARAWMDETWQLLEKHFWEPEFGLYRDEADAQFNFTSYRGQNANMHMCE 187 Query: 201 ACLAAHVATGDAVYLERAQLLIERFVFGLARQSQDLVWEHYRQDWSLDHDYNRGNRDNIF 260 A +AA+ A+G+ YL+RA L + A ++ LVWEHY W++D DYNR N ++F Sbjct: 188 AMIAAYEASGEQRYLDRALSLADTMTRRQAAKADGLVWEHYDLQWNIDWDYNRDNPKHLF 247 Query: 261 KPWGFQTGHQTEWAKLLLIAHAQEPRPAYVTRAAELQDAAWQHGWDALYGGLIYGFDPDL 320 +PWGFQ GHQTEWAKLL++ P + A L D A + WDA GGL YGFDPD Sbjct: 248 RPWGFQPGHQTEWAKLLMLLDRYAPTDWLLPTAQHLFDVAVERSWDAQRGGLYYGFDPDG 307 Query: 321 RPYDTDKYFWVQAESFASAWRLWRVTGEERFRQQYHAIWAWSWAHLVDHHHGAWFRILAA 380 + D DKYFWVQAES A+A L + TGE R+ Q Y +W +SW H++DH +GAW+RIL A Sbjct: 308 KVCDDDKYFWVQAESLAAAALLAQRTGEARYWQWYDKLWDYSWKHMIDHRYGAWYRILDA 367 Query: 381 DGSKLEDTKSPAGKVDYHTMGACWDVM 407 D K D KSPAGK DYHTMGAC++V+ Sbjct: 368 DNRKYSDEKSPAGKTDYHTMGACYEVL 394 >ref|ZP_02372429.1| N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) family protein [Burkholderia thailandensis TXDOH] Length = 470 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 209/387 (54%), Positives = 251/387 (64%), Gaps = 8/387 (2%) Query: 29 FLQAHVADTLAFYDRHAIDPEGGFFHYLKDDGSVYERSHRHLVSATRLVFTQSMAYLHTG 88 FL AHV DTL FY HA DP GGF+H+ +DDGSVYER+ RHLVS+ R VF +MAY H G Sbjct: 31 FLVAHVEDTLRFYAPHAFDPSGGFYHFFRDDGSVYERATRHLVSSCRFVFNYAMAYRHFG 90 Query: 89 QSRYLEQTRHALAHLQRFRHAGGPLAGLYAWTL--RDGQ---IEDGTVMAYGQAFVLLAF 143 +R+LE RH L L R H G Y W + RDG+ DGT YG AFVLLA Sbjct: 91 DARHLEYVRHGLRFL-RDAHWDAEHEG-YDWEIEWRDGEKRSTRDGTRHCYGLAFVLLAA 148 Query: 144 AQAHRVGLCDAQQ-VAQAYERMESAFFEPAHEAYADEITPSGELIPYRGQNANMHMCEAC 202 A A G+ +A+ +A ++ ME F++ A YAD+ TP+ + YRGQNANMH EA Sbjct: 149 AHAVMAGVEEARPLIAHTFDLMEHRFWDRAAGLYADDATPNWTVSSYRGQNANMHATEAL 208 Query: 203 LAAHVATGDAVYLERAQLLIERFVFGLARQSQDLVWEHYRQDWSLDHDYNRGNRDNIFKP 262 LAA+ ATG YL+RA+ + V A S+ LVWEH+ DWS+D +YN+ + NIF+P Sbjct: 209 LAAYEATGHLTYLDRAEKIATNIVQRQAALSRGLVWEHFHADWSIDWEYNKEDSSNIFRP 268 Query: 263 WGFQTGHQTEWAKLLLIAHAQEPRPAYVTRAAELQDAAWQHGWDALYGGLIYGFDPDLRP 322 WGFQ GHQTEWAKLLLI P RA EL DAA+ H WD+ +GGL YGF PD Sbjct: 269 WGFQPGHQTEWAKLLLILERHRPLDWLAPRAIELFDAAFSHAWDSDHGGLCYGFGPDYTV 328 Query: 323 YDTDKYFWVQAESFASAWRLWRVTGEERFRQQYHAIWAWSWAHLVDHHHGAWFRILAADG 382 D DKYFWVQAESFA+A L R TG ERF Y IW +SWAH VDH +GAW+RIL D Sbjct: 329 CDHDKYFWVQAESFAAAALLARRTGSERFWDWYDEIWRYSWAHFVDHRYGAWYRILTCDN 388 Query: 383 SKLEDTKSPAGKVDYHTMGACWDVMEA 409 K D KSPAGK DYHTMGAC++V+ A Sbjct: 389 RKYSDEKSPAGKTDYHTMGACYEVLHA 415 >ref|YP_440857.1| N-acylglucosamine 2-epimerase family protein [Burkholderia thailandensis E264] ref|ZP_05588750.1| N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) family protein [Burkholderia thailandensis E264] gb|ABC38217.1| N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) family [Burkholderia thailandensis E264] Length = 470 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 209/387 (54%), Positives = 251/387 (64%), Gaps = 8/387 (2%) Query: 29 FLQAHVADTLAFYDRHAIDPEGGFFHYLKDDGSVYERSHRHLVSATRLVFTQSMAYLHTG 88 FL AHV DTL FY HA DP GGF+H+ +DDGSVYER+ RHLVS+ R VF +MAY H G Sbjct: 31 FLVAHVEDTLRFYAPHAFDPSGGFYHFFRDDGSVYERATRHLVSSCRFVFNYAMAYRHFG 90 Query: 89 QSRYLEQTRHALAHLQRFRHAGGPLAGLYAWTL--RDGQ---IEDGTVMAYGQAFVLLAF 143 +R+LE RH L L R H G Y W + RDG+ DGT YG AFVLLA Sbjct: 91 DARHLEYVRHGLRFL-RDAHWDAEHEG-YDWEIEWRDGEKRSTRDGTRHCYGLAFVLLAA 148 Query: 144 AQAHRVGLCDAQQ-VAQAYERMESAFFEPAHEAYADEITPSGELIPYRGQNANMHMCEAC 202 A A G+ +A+ +A ++ ME F++ A YAD+ TP+ + YRGQNANMH EA Sbjct: 149 AHAVMAGVEEARPLIAHTFDLMEHRFWDRAAGLYADDATPNWTVSSYRGQNANMHATEAL 208 Query: 203 LAAHVATGDAVYLERAQLLIERFVFGLARQSQDLVWEHYRQDWSLDHDYNRGNRDNIFKP 262 LAA+ ATG YL+RA+ + V A S+ LVWEH+ DWS+D +YN+ + NIF+P Sbjct: 209 LAAYEATGHLTYLDRAEKIATNIVQRQAALSRGLVWEHFHADWSIDWEYNKEDSSNIFRP 268 Query: 263 WGFQTGHQTEWAKLLLIAHAQEPRPAYVTRAAELQDAAWQHGWDALYGGLIYGFDPDLRP 322 WGFQ GHQTEWAKLLLI P RA EL DAA+ H WD+ +GGL YGF PD Sbjct: 269 WGFQPGHQTEWAKLLLILERHRPLDWLAPRAIELFDAAFSHAWDSDHGGLCYGFGPDYTV 328 Query: 323 YDTDKYFWVQAESFASAWRLWRVTGEERFRQQYHAIWAWSWAHLVDHHHGAWFRILAADG 382 D DKYFWVQAESFA+A L R TG ERF Y IW +SWAH VDH +GAW+RIL D Sbjct: 329 CDHDKYFWVQAESFAAAALLARRTGSERFWDWYDEIWRYSWAHFVDHRYGAWYRILTCDN 388 Query: 383 SKLEDTKSPAGKVDYHTMGACWDVMEA 409 K D KSPAGK DYHTMGAC++V+ A Sbjct: 389 RKYSDEKSPAGKTDYHTMGACYEVLHA 415