BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2511.p (202 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774152.1| nicotinamidase-like protein [Herbaspirillum ... 263 2e-68 ref|YP_726952.1| amidase [Ralstonia eutropha H16] >gi|113527239|... 213 9e-54 ref|YP_004686186.1| nicotinamidase isochorismatase family [Cupri... 211 7e-53 ref|YP_002006003.1| isochorismatase hydrolase [Cupriavidus taiwa... 208 3e-52 ref|YP_584373.1| isochorismatase family hydrolase [Cupriavidus m... 196 2e-48 >ref|YP_003774152.1| nicotinamidase-like protein [Herbaspirillum seropedicae SmR1] gb|ADJ62244.1| nicotinamidase-like protein [Herbaspirillum seropedicae SmR1] Length = 202 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 165/202 (81%), Positives = 178/202 (88%) Query: 1 MSSPQTLIQIAGGSARAATWQEAVLLIIDHQTEYTTGRAPLAGIDAAVGQIAELLRQARA 60 MS+PQTLIQIAGGS RAATWQEA L+IIDHQTEYTTGRAPLAGI AAV ++A LL ARA Sbjct: 1 MSTPQTLIQIAGGSPRAATWQEAALVIIDHQTEYTTGRAPLAGIGAAVAEVALLLEHARA 60 Query: 61 AGAPVIHIVHHSKPGSAMFDPQGPHVAIIDGVQPQGEELVLPKGLPNAFAGTALDEAIKN 120 A APVIH+VHH KPG AMFDPQGPHVAIIDGVQPQ E V+ KGLPN+FAGT LDE +K Sbjct: 61 AAAPVIHVVHHGKPGGAMFDPQGPHVAIIDGVQPQPGEAVITKGLPNSFAGTTLDETLKK 120 Query: 121 TGRKSLIVTGFATHMCVSATVRSALDHGYASTVVAAACATRDLPDALGGPAIAAADIQRV 180 TGRKSLI+ GFATHMCVSATVRSALDHGYA TVVAAACATRDLPD LGGPA++AA+IQRV Sbjct: 121 TGRKSLIIAGFATHMCVSATVRSALDHGYACTVVAAACATRDLPDPLGGPALSAAEIQRV 180 Query: 181 ALAELADRYATVVADAAALASV 202 ALAELADRYATVVA A L +V Sbjct: 181 ALAELADRYATVVAHAGLLPAV 202 >ref|YP_726952.1| amidase [Ralstonia eutropha H16] emb|CAJ93584.1| amidase related to nicotinamidase,Isochorismatase family [Ralstonia eutropha H16] Length = 201 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 125/198 (63%), Positives = 147/198 (74%) Query: 1 MSSPQTLIQIAGGSARAATWQEAVLLIIDHQTEYTTGRAPLAGIDAAVGQIAELLRQARA 60 M++P TL+ +AG S + W+ AVL++IDHQ EY GR PLAG+ AAV A+LL AR Sbjct: 1 MTTPTTLLDLAGASRTPSAWEAAVLILIDHQREYVDGRLPLAGMPAAVAACAQLLALARR 60 Query: 61 AGAPVIHIVHHSKPGSAMFDPQGPHVAIIDGVQPQGEELVLPKGLPNAFAGTALDEAIKN 120 G PVIH+ HH +PGS FDP GP+ A I+GV PQ E+ + KGLPN+FAGT L + + Sbjct: 61 HGTPVIHVAHHGRPGSMAFDPTGPYAAFIEGVGPQAGEITVTKGLPNSFAGTTLADELAR 120 Query: 121 TGRKSLIVTGFATHMCVSATVRSALDHGYASTVVAAACATRDLPDALGGPAIAAADIQRV 180 GRK LIV GF THMCVSATVRSALDHGY STVVAAACATRDLPD LGGPA+ AAD+ R Sbjct: 121 LGRKELIVAGFQTHMCVSATVRSALDHGYRSTVVAAACATRDLPDPLGGPAVPAADLHRS 180 Query: 181 ALAELADRYATVVADAAA 198 LA L DR+ATVVADA A Sbjct: 181 TLAALNDRFATVVADAGA 198 >ref|YP_004686186.1| nicotinamidase isochorismatase family [Cupriavidus necator N-1] gb|AEI77705.1| nicotinamidase isochorismatase family [Cupriavidus necator N-1] Length = 201 Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 124/198 (62%), Positives = 145/198 (73%) Query: 1 MSSPQTLIQIAGGSARAATWQEAVLLIIDHQTEYTTGRAPLAGIDAAVGQIAELLRQARA 60 M+ P TL+ +AG S + W AVL++IDHQ EY GR PL G+ AAV A+LL AR+ Sbjct: 1 MTIPTTLLGLAGASRTPSAWDAAVLILIDHQREYVDGRLPLVGMPAAVAACAQLLALARS 60 Query: 61 AGAPVIHIVHHSKPGSAMFDPQGPHVAIIDGVQPQGEELVLPKGLPNAFAGTALDEAIKN 120 G PVIH+ HH +PGS FDP GP+ A I+GV PQ E+ + KGLPN+FAGT L + + Sbjct: 61 HGTPVIHVAHHGRPGSMAFDPTGPYAAFIEGVGPQAGEITVTKGLPNSFAGTTLADELAR 120 Query: 121 TGRKSLIVTGFATHMCVSATVRSALDHGYASTVVAAACATRDLPDALGGPAIAAADIQRV 180 GRK LIV GF THMCVSATVRSALDHGY STVVAAACATRDLPD LGGPA+ AAD+ R Sbjct: 121 LGRKELIVAGFQTHMCVSATVRSALDHGYRSTVVAAACATRDLPDPLGGPAVPAADLHRS 180 Query: 181 ALAELADRYATVVADAAA 198 LA L DR+ATVVADA A Sbjct: 181 TLAALNDRFATVVADAGA 198 >ref|YP_002006003.1| isochorismatase hydrolase [Cupriavidus taiwanensis LMG 19424] emb|CAQ69940.1| putative isochorismatase hydrolase family protein [Cupriavidus taiwanensis LMG 19424] Length = 201 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 124/201 (61%), Positives = 147/201 (73%) Query: 1 MSSPQTLIQIAGGSARAATWQEAVLLIIDHQTEYTTGRAPLAGIDAAVGQIAELLRQARA 60 M +P TL+ +AG S + W +VL++IDHQ EY GR PLAG+ AAV A+LL ARA Sbjct: 1 MITPTTLLDLAGASRIPSAWDASVLILIDHQREYVDGRLPLAGMPAAVAACADLLALARA 60 Query: 61 AGAPVIHIVHHSKPGSAMFDPQGPHVAIIDGVQPQGEELVLPKGLPNAFAGTALDEAIKN 120 G PVIH+ HH +PGS FDP GP+ A I+GV P G E+ + KGLPN+FAGT L + + Sbjct: 61 HGTPVIHVAHHGRPGSLAFDPTGPYAAFIEGVGPDGGEITVTKGLPNSFAGTTLADELSR 120 Query: 121 TGRKSLIVTGFATHMCVSATVRSALDHGYASTVVAAACATRDLPDALGGPAIAAADIQRV 180 GRK LIV GF THMCVSATVR+ALDHG+ STVVAAACATRDLPD LGGPA+ AAD+ R Sbjct: 121 LGRKELIVAGFQTHMCVSATVRAALDHGFRSTVVAAACATRDLPDPLGGPAVPAADLHRS 180 Query: 181 ALAELADRYATVVADAAALAS 201 LA L DR+ATVVADA A S Sbjct: 181 TLAALNDRFATVVADAGAWRS 201 >ref|YP_584373.1| isochorismatase family hydrolase [Cupriavidus metallidurans CH34] gb|ABF09104.1| Hydrolase, isochorismatase family [Cupriavidus metallidurans CH34] Length = 202 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 114/194 (58%), Positives = 139/194 (71%), Gaps = 1/194 (0%) Query: 4 PQTLIQIAGGSARAATWQEAVLLIIDHQTEYTTGRAPLAGIDAAVGQIAELLRQARAAGA 63 P TL+ AG S + + W +AVL+++DHQ EY G+ PL G+ AV ELL AR G+ Sbjct: 7 PTTLLDAAGASRQPSAWSDAVLVLVDHQREYVDGKLPLTGMPEAVASCGELLALARRYGS 66 Query: 64 PVIHIVHHSKPGSAMFDPQGPHVAIIDGVQPQGEELVLPKGLPNAFAGTALDEAIKNTGR 123 PVIH+VHH K G A FDP GPH AII+G+ P E + K LPN+FAGT L + + TG+ Sbjct: 67 PVIHVVHHGKAGGA-FDPAGPHAAIIEGLTPVDGEQSVVKHLPNSFAGTDLADLLVATGK 125 Query: 124 KSLIVTGFATHMCVSATVRSALDHGYASTVVAAACATRDLPDALGGPAIAAADIQRVALA 183 K LIV GF THMC+SATVRSALDHGY T+VAAACATRDLPD LGG ++AA + RV LA Sbjct: 126 KELIVAGFQTHMCISATVRSALDHGYRVTLVAAACATRDLPDPLGGAPLSAAVLHRVTLA 185 Query: 184 ELADRYATVVADAA 197 L DR+ATVVADA+ Sbjct: 186 ALNDRFATVVADAS 199