BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2507.p (151 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774148.1| metal-dependent hydrolase [Herbaspirillum se... 235 1e-60 ref|YP_001352119.1| hypothetical protein mma_0429 [Janthinobacte... 201 3e-50 ref|ZP_08275544.1| A heat shock protein involved in translation,... 198 2e-49 ref|YP_004754257.1| putative metal-dependent hydrolase [Collimon... 197 6e-49 ref|YP_001098731.1| hypothetical protein HEAR0379 [Herminiimonas... 180 7e-44 >ref|YP_003774148.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1] gb|ADJ62240.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1] Length = 151 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 140/151 (92%), Positives = 145/151 (96%) Query: 1 MPKHKLTLSVQYADDRLKDSITRPLLRRWVQAALFAPAELTLRFVGSEEGRDLNRDYRGK 60 MPKHKLTLSVQYAD+RLK +IT LLRRWVQAALFAPA+LTLRFVGSEEGRDLNRDYRGK Sbjct: 1 MPKHKLTLSVQYADERLKKTITTTLLRRWVQAALFAPAQLTLRFVGSEEGRDLNRDYRGK 60 Query: 61 DYATNVLTFAYTEDEDSEVTEADIIFCTDVLEKEAAEQKKSVEEHTAHLVVHGVLHAQGY 120 DYATNVLTFAYTEDEDSEVTEADIIFCTDVLEKEAAEQKKSVEEHTAHLVVHGVLHAQGY Sbjct: 61 DYATNVLTFAYTEDEDSEVTEADIIFCTDVLEKEAAEQKKSVEEHTAHLVVHGVLHAQGY 120 Query: 121 DHEDDEEANEMEALETEILATLGYDNPYKSR 151 DHEDDEEA+EMEALETEILA LGY NPY +R Sbjct: 121 DHEDDEEADEMEALETEILAGLGYANPYAAR 151 >ref|YP_001352119.1| hypothetical protein mma_0429 [Janthinobacterium sp. Marseille] sp|A6SV22|RRMF_JANMA RecName: Full=Probable rRNA maturation factor gb|ABR90162.1| Hypothetical protein mma_0429 [Janthinobacterium sp. Marseille] Length = 152 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 116/148 (78%), Positives = 130/148 (87%) Query: 1 MPKHKLTLSVQYADDRLKDSITRPLLRRWVQAALFAPAELTLRFVGSEEGRDLNRDYRGK 60 + K+KL+LSVQY D RL+D ITRP LR WV+AAL APA++TLRFV + EG+DLNR+YRGK Sbjct: 2 LQKNKLSLSVQYPDKRLQDIITRPKLRSWVKAALLAPAQITLRFVDAAEGKDLNRNYRGK 61 Query: 61 DYATNVLTFAYTEDEDSEVTEADIIFCTDVLEKEAAEQKKSVEEHTAHLVVHGVLHAQGY 120 DYATNVLTFAYTEDEDSE T+ADII CTDVL+ EAAEQ+KSVEEH AHLVVHGVLHAQGY Sbjct: 62 DYATNVLTFAYTEDEDSETTQADIILCTDVLQLEAAEQEKSVEEHAAHLVVHGVLHAQGY 121 Query: 121 DHEDDEEANEMEALETEILATLGYDNPY 148 DHE DEEA EMEALE EILA LG+ NPY Sbjct: 122 DHESDEEAEEMEALEIEILADLGFRNPY 149 >ref|ZP_08275544.1| A heat shock protein involved in translation, putative protease [Oxalobacteraceae bacterium IMCC9480] gb|EGF30976.1| A heat shock protein involved in translation, putative protease [Oxalobacteraceae bacterium IMCC9480] Length = 154 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 104/150 (69%), Positives = 122/150 (81%), Gaps = 3/150 (2%) Query: 3 KHKLTLSVQYADDRLKDSITRPLLRRWVQAALFAPAELTLRFVGSEEGRDLNRDYRGKDY 62 K+KL+LSVQY D RL +TRPL+RRWVQAALFAPAELT+RFV S+EGR LNRDYR KDY Sbjct: 4 KNKLSLSVQYPDPRLATLVTRPLVRRWVQAALFAPAELTVRFVDSDEGRTLNRDYRSKDY 63 Query: 63 ATNVLTFAYT---EDEDSEVTEADIIFCTDVLEKEAAEQKKSVEEHTAHLVVHGVLHAQG 119 ATNVLTFAY ED + ++T AD+I CTDVL+ EA Q K + H AHLVVHGV+HAQG Sbjct: 64 ATNVLTFAYNDGEEDPNDDITRADLILCTDVLQAEALAQGKPLLAHAAHLVVHGVMHAQG 123 Query: 120 YDHEDDEEANEMEALETEILATLGYDNPYK 149 YDHED+ EA+EMEALE E+LA LG+ NPY+ Sbjct: 124 YDHEDEVEADEMEALEIEVLAKLGFGNPYQ 153 >ref|YP_004754257.1| putative metal-dependent hydrolase [Collimonas fungivorans Ter331] gb|AEK63434.1| putative metal-dependent hydrolase [Collimonas fungivorans Ter331] Length = 155 Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 113/155 (72%), Positives = 131/155 (84%), Gaps = 4/155 (2%) Query: 1 MPK-HKLTLSVQYADDRLKDSITRPLLRRWVQAALFAPAELTLRFVGSEEGRDLNRDYRG 59 MPK +KL+LSVQY D RL++S+ RP LRRWVQAAL APAELT+RFV +EEGR LNRDYRG Sbjct: 1 MPKKNKLSLSVQYPDPRLQESVPRPQLRRWVQAALLAPAELTIRFVDAEEGRALNRDYRG 60 Query: 60 KDYATNVLTFAYTEDE---DSEVTEADIIFCTDVLEKEAAEQKKSVEEHTAHLVVHGVLH 116 KDYATNVLTFAY+ED+ D+ +T+ADII CTDVL++EA EQ K++ EH AHLVVHGVLH Sbjct: 61 KDYATNVLTFAYSEDQEENDNGITQADIILCTDVLQREAEEQGKTLVEHAAHLVVHGVLH 120 Query: 117 AQGYDHEDDEEANEMEALETEILATLGYDNPYKSR 151 AQGYDHEDDEEA EME LE EIL +LG+ NPY R Sbjct: 121 AQGYDHEDDEEAAEMENLEIEILNSLGWPNPYADR 155 >ref|YP_001098731.1| hypothetical protein HEAR0379 [Herminiimonas arsenicoxydans] sp|A4G265|RRMF_HERAR RecName: Full=Probable rRNA maturation factor emb|CAL60602.1| putative metal-dependent hydrolase [Herminiimonas arsenicoxydans] Length = 156 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 103/153 (67%), Positives = 124/153 (81%), Gaps = 5/153 (3%) Query: 1 MPKHKLTLSVQYADDRLKDSITRPLLRRWVQAALFAPAELTLRFVGSEEGRDLNRDYRGK 60 M ++KL+LSVQYAD R++D +TRPLLR+WV+AAL APA++TLRFV + EG+ LNR+YRGK Sbjct: 1 MQQNKLSLSVQYADTRVQDILTRPLLRKWVKAALLAPAQITLRFVDAAEGQILNRNYRGK 60 Query: 61 DYATNVLTFAYT-----EDEDSEVTEADIIFCTDVLEKEAAEQKKSVEEHTAHLVVHGVL 115 DYATNVLTF Y + D VT+ADII CTDVL++EAAEQ K++ H AHLV+HGVL Sbjct: 61 DYATNVLTFTYNDDDGSDIADDAVTQADIILCTDVLQREAAEQNKTLIFHAAHLVIHGVL 120 Query: 116 HAQGYDHEDDEEANEMEALETEILATLGYDNPY 148 HAQGYDHE DEEA EMEALE E LA LG+ NPY Sbjct: 121 HAQGYDHESDEEAEEMEALEIEFLAALGFPNPY 153