BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2503.p (305 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774144.1| glycyl-tRNA synthetase subunit alpha [Herbas... 612 e-173 ref|ZP_08275987.1| Glycyl-tRNA synthetase alpha chain [Oxalobact... 564 e-159 ref|YP_004754263.1| glycyl-tRNA synthetase subunit alpha [Collim... 564 e-159 ref|YP_004030136.1| glycyl-tRNA synthetase alpha chain [Burkhold... 547 e-154 ref|ZP_04579239.1| glycyl-tRNA synthetase [Oxalobacter formigene... 543 e-152 >ref|YP_003774144.1| glycyl-tRNA synthetase subunit alpha [Herbaspirillum seropedicae SmR1] gb|ADJ62236.1| glycyl-tRNA synthetase alpha chain protein [Herbaspirillum seropedicae SmR1] Length = 305 Score = 612 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 300/305 (98%), Positives = 303/305 (99%) Query: 1 MLTFQQIILKLQEYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 60 MLTFQQIILKLQEYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP Sbjct: 1 MLTFQQIILKLQEYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 60 Query: 61 KDGRYGENPNRMQHYYQYQVVLKPAPENILDLYLGSLEALGLDLKQNDVRFVEDDWENPT 120 KDGRYGENPNRMQHYYQYQVVLKPAPENILDLYLGSLEALGLDLKQNDVRFVEDDWENPT Sbjct: 61 KDGRYGENPNRMQHYYQYQVVLKPAPENILDLYLGSLEALGLDLKQNDVRFVEDDWENPT 120 Query: 121 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQGVENVYDLVW 180 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQGVENVYDLVW Sbjct: 121 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQGVENVYDLVW 180 Query: 181 TEWTENGVKKHLTYGDVFHQNEVEQSTFNFEYSNTDFLFSLFTNYEAEAKRLMEVPLALP 240 TEW ENGVKKHLTYGDVFHQNEVEQSTFNFEYSNT+FLFSLF+NYEAEAKRLMEVPLALP Sbjct: 181 TEWMENGVKKHLTYGDVFHQNEVEQSTFNFEYSNTEFLFSLFSNYEAEAKRLMEVPLALP 240 Query: 241 AYEQVLKAAHTFNMLDARGAISVTERAAYIGRIRNLSRAVAQAYFESRERLGFPMLGQAP 300 AYEQVLKAAHTFNMLDARGAISVTERAAYIGRIRNLSRAVAQAYFESRERLGFPMLGQ P Sbjct: 241 AYEQVLKAAHTFNMLDARGAISVTERAAYIGRIRNLSRAVAQAYFESRERLGFPMLGQGP 300 Query: 301 AQAAA 305 A+AAA Sbjct: 301 AKAAA 305 >ref|ZP_08275987.1| Glycyl-tRNA synthetase alpha chain [Oxalobacteraceae bacterium IMCC9480] gb|EGF30538.1| Glycyl-tRNA synthetase alpha chain [Oxalobacteraceae bacterium IMCC9480] Length = 306 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 272/295 (92%), Positives = 282/295 (95%) Query: 1 MLTFQQIILKLQEYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 60 MLTFQQ+ILKLQEYW AQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP Sbjct: 1 MLTFQQVILKLQEYWAAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 60 Query: 61 KDGRYGENPNRMQHYYQYQVVLKPAPENILDLYLGSLEALGLDLKQNDVRFVEDDWENPT 120 KDGRYGENPNRMQHYYQYQVVLKPAPENILDLYLGSLEALGLDLK+NDVRFVEDDWENPT Sbjct: 61 KDGRYGENPNRMQHYYQYQVVLKPAPENILDLYLGSLEALGLDLKKNDVRFVEDDWENPT 120 Query: 121 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQGVENVYDLVW 180 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQGVENVYDLVW Sbjct: 121 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQGVENVYDLVW 180 Query: 181 TEWTENGVKKHLTYGDVFHQNEVEQSTFNFEYSNTDFLFSLFTNYEAEAKRLMEVPLALP 240 TE T NGV + LTYGDVFHQNEVEQST+NFEY+NTDFLFS FTN+EAEAKRLME+PL LP Sbjct: 181 TEATTNGVTRKLTYGDVFHQNEVEQSTYNFEYANTDFLFSQFTNFEAEAKRLMEIPLTLP 240 Query: 241 AYEQVLKAAHTFNMLDARGAISVTERAAYIGRIRNLSRAVAQAYFESRERLGFPM 295 AYE +LKAAH+FNMLDARGAISVTERAAYIGRIR LSR VA AY SRE+LGFPM Sbjct: 241 AYEMILKAAHSFNMLDARGAISVTERAAYIGRIRTLSRGVAHAYLASREQLGFPM 295 >ref|YP_004754263.1| glycyl-tRNA synthetase subunit alpha [Collimonas fungivorans Ter331] gb|AEK63440.1| Glycyl-tRNA synthetase alpha chain [Collimonas fungivorans Ter331] Length = 326 Score = 564 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 272/295 (92%), Positives = 286/295 (96%) Query: 1 MLTFQQIILKLQEYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 60 MLTFQQIILKLQ+YWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP Sbjct: 1 MLTFQQIILKLQDYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 60 Query: 61 KDGRYGENPNRMQHYYQYQVVLKPAPENILDLYLGSLEALGLDLKQNDVRFVEDDWENPT 120 KDGRYGENPNR+QHYYQYQVVLKPAPENILDLYLGSL ALGLDLK+NDVRFVEDDWENPT Sbjct: 61 KDGRYGENPNRLQHYYQYQVVLKPAPENILDLYLGSLAALGLDLKRNDVRFVEDDWENPT 120 Query: 121 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQGVENVYDLVW 180 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQGVENVYDLVW Sbjct: 121 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQGVENVYDLVW 180 Query: 181 TEWTENGVKKHLTYGDVFHQNEVEQSTFNFEYSNTDFLFSLFTNYEAEAKRLMEVPLALP 240 TEW ENGV K L+YGDVFHQNEVEQST+NFE++NT+FLF LF NYEAEAKRL+ VPLALP Sbjct: 181 TEWVENGVTKKLSYGDVFHQNEVEQSTYNFEHANTEFLFPLFGNYEAEAKRLLAVPLALP 240 Query: 241 AYEQVLKAAHTFNMLDARGAISVTERAAYIGRIRNLSRAVAQAYFESRERLGFPM 295 AYE VLKAAHTFN+LDARGAISVTERAAY+GRIRNLSRAVAQAY++SR +LGFPM Sbjct: 241 AYEMVLKAAHTFNLLDARGAISVTERAAYMGRIRNLSRAVAQAYYDSRAKLGFPM 295 >ref|YP_004030136.1| glycyl-tRNA synthetase alpha chain [Burkholderia rhizoxinica HKI 454] emb|CBW75992.1| Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) [Burkholderia rhizoxinica HKI 454] Length = 403 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 265/308 (86%), Positives = 282/308 (91%), Gaps = 4/308 (1%) Query: 1 MLTFQQIILKLQEYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 60 MLTFQQIIL LQ YWD QGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP Sbjct: 67 MLTFQQIILTLQSYWDKQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 126 Query: 61 KDGRYGENPNRMQHYYQYQVVLKPAPENILDLYLGSLEALGLDLKQNDVRFVEDDWENPT 120 KDGRYGENPNRMQHYYQYQVVLKPAPENILDLYLGSL+ALGLDLKQNDVRFVEDDWENPT Sbjct: 127 KDGRYGENPNRMQHYYQYQVVLKPAPENILDLYLGSLQALGLDLKQNDVRFVEDDWENPT 186 Query: 121 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQGVENVYDLVW 180 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQ VENV+DLVW Sbjct: 187 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQQVENVFDLVW 246 Query: 181 TEWTENG----VKKHLTYGDVFHQNEVEQSTFNFEYSNTDFLFSLFTNYEAEAKRLMEVP 236 TEW E+G V + LTYGDVFHQNEVEQST+NFE+SN + LF+ F YE+EA+R++E Sbjct: 247 TEWEEDGPDGKVLRRLTYGDVFHQNEVEQSTYNFEHSNAELLFTFFNAYESEARRIIEQR 306 Query: 237 LALPAYEQVLKAAHTFNMLDARGAISVTERAAYIGRIRNLSRAVAQAYFESRERLGFPML 296 LALPAYE +LKAAHTFN+LDARGAISVTERAAYIGRIR LSR VAQAY++SRE LGFPML Sbjct: 307 LALPAYELILKAAHTFNLLDARGAISVTERAAYIGRIRALSRLVAQAYYDSREALGFPML 366 Query: 297 GQAPAQAA 304 G+A A Sbjct: 367 GEAAGAHA 374 >ref|ZP_04579239.1| glycyl-tRNA synthetase [Oxalobacter formigenes OXCC13] gb|EEO30212.1| glycyl-tRNA synthetase [Oxalobacter formigenes OXCC13] Length = 303 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 259/297 (87%), Positives = 276/297 (92%) Query: 1 MLTFQQIILKLQEYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 60 M+TFQQII LQ+YW QGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP Sbjct: 1 MITFQQIIFTLQQYWSQQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 60 Query: 61 KDGRYGENPNRMQHYYQYQVVLKPAPENILDLYLGSLEALGLDLKQNDVRFVEDDWENPT 120 KDGRYGENPNRMQHYYQ+QVVLKPAPE+ILDLYLGSL ALGLDLKQNDVRFVEDDWENPT Sbjct: 61 KDGRYGENPNRMQHYYQFQVVLKPAPEDILDLYLGSLAALGLDLKQNDVRFVEDDWENPT 120 Query: 121 LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVLGEITYGIERLAMYLQGVENVYDLVW 180 LGAWGLGWEVWLNGMEVTQFTYFQQVGG+DCKP+LGEITYG+ERLAMYLQGVENVYDLVW Sbjct: 121 LGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCKPILGEITYGLERLAMYLQGVENVYDLVW 180 Query: 181 TEWTENGVKKHLTYGDVFHQNEVEQSTFNFEYSNTDFLFSLFTNYEAEAKRLMEVPLALP 240 TEWT+ GVKK+LTYGDV+HQNEVEQS FNFE +N FLF+LF NYE EAKRL+E L LP Sbjct: 181 TEWTDRGVKKYLTYGDVYHQNEVEQSAFNFEQANVPFLFTLFGNYETEAKRLIEEKLTLP 240 Query: 241 AYEQVLKAAHTFNMLDARGAISVTERAAYIGRIRNLSRAVAQAYFESRERLGFPMLG 297 AYE +LKAAHTFN+LDARGA+SVTERAAYIGRIR LSR VAQ Y+ESRE LGFPM G Sbjct: 241 AYENILKAAHTFNLLDARGALSVTERAAYIGRIRTLSRMVAQGYYESREALGFPMCG 297