BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2496.p         (105 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774138.1| chloride-channel protein [Herbaspirillum ser...   176   7e-43
ref|ZP_03789453.1| chloride transporter, ClC family [Burkholderi...   164   3e-39
ref|ZP_04819697.1| chloride transporter, ClC family [Burkholderi...   163   6e-39
ref|YP_003604373.1| Cl- channel voltage-gated family protein [Bu...   162   2e-38
ref|ZP_05586563.1| voltage gated chloride channel family protein...   162   2e-38

>ref|YP_003774138.1| chloride-channel protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ62230.1| chloride-channel protein [Herbaspirillum seropedicae SmR1]
          Length = 441

 Score =  176 bits (447), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 105/105 (100%), Positives = 105/105 (100%)

Query: 1   MIGSYLPGLPGGIFAPSLSIGAGFGNLLHLLFGGTSLPMLVALAMVGYLAAVTQSPITAF 60
           MIGSYLPGLPGGIFAPSLSIGAGFGNLLHLLFGGTSLPMLVALAMVGYLAAVTQSPITAF
Sbjct: 337 MIGSYLPGLPGGIFAPSLSIGAGFGNLLHLLFGGTSLPMLVALAMVGYLAAVTQSPITAF 396

Query: 61  VIVMEMVDGHALVISLMATALIASAVSKVFAPPLYETLAERYLKS 105
           VIVMEMVDGHALVISLMATALIASAVSKVFAPPLYETLAERYLKS
Sbjct: 397 VIVMEMVDGHALVISLMATALIASAVSKVFAPPLYETLAERYLKS 441


>ref|ZP_03789453.1| chloride transporter, ClC family [Burkholderia pseudomallei
           Pakistan 9]
 gb|EEH30141.1| chloride transporter, ClC family [Burkholderia pseudomallei
           Pakistan 9]
          Length = 551

 Score =  164 bits (416), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 88/104 (84%), Positives = 97/104 (93%)

Query: 1   MIGSYLPGLPGGIFAPSLSIGAGFGNLLHLLFGGTSLPMLVALAMVGYLAAVTQSPITAF 60
           M+ SYLPG+PGGIFAPSLSIGAGFGNLLH +F G  LPML+ALAMVGYLAAVTQSPIT+F
Sbjct: 326 MVASYLPGIPGGIFAPSLSIGAGFGNLLHFVFSGMHLPMLIALAMVGYLAAVTQSPITSF 385

Query: 61  VIVMEMVDGHALVISLMATALIASAVSKVFAPPLYETLAERYLK 104
           VIVMEM++GHALVISLMATALIAS VS++F PPLYETLAERYLK
Sbjct: 386 VIVMEMINGHALVISLMATALIASRVSRLFVPPLYETLAERYLK 429


>ref|ZP_04819697.1| chloride transporter, ClC family [Burkholderia mallei PRL-20]
 gb|EES47565.1| chloride transporter, ClC family [Burkholderia mallei PRL-20]
          Length = 560

 Score =  163 bits (413), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 88/104 (84%), Positives = 97/104 (93%)

Query: 1   MIGSYLPGLPGGIFAPSLSIGAGFGNLLHLLFGGTSLPMLVALAMVGYLAAVTQSPITAF 60
           M+ SYLPG+PGGIFAPSLSIGAGFGNLLH +F G  LPML+ALAMVGYLAAVTQSPIT+F
Sbjct: 335 MVASYLPGIPGGIFAPSLSIGAGFGNLLHFVFSGMHLPMLIALAMVGYLAAVTQSPITSF 394

Query: 61  VIVMEMVDGHALVISLMATALIASAVSKVFAPPLYETLAERYLK 104
           VIVMEM++GHALVISLMATALIAS VS++F PPLYETLAERYLK
Sbjct: 395 VIVMEMINGHALVISLMATALIASRVSRLFVPPLYETLAERYLK 438


>ref|YP_003604373.1| Cl- channel voltage-gated family protein [Burkholderia sp.
           CCGE1002]
 gb|ADG14862.1| Cl- channel voltage-gated family protein [Burkholderia sp.
           CCGE1002]
          Length = 478

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 88/103 (85%), Positives = 99/103 (96%)

Query: 1   MIGSYLPGLPGGIFAPSLSIGAGFGNLLHLLFGGTSLPMLVALAMVGYLAAVTQSPITAF 60
           M+GSYLPG+PGGIFAPSLSIGAGFGNLLH++FG   LPML+ALAMVGYLAAVTQSPIT+F
Sbjct: 328 MVGSYLPGIPGGIFAPSLSIGAGFGNLLHIVFGSMQLPMLIALAMVGYLAAVTQSPITSF 387

Query: 61  VIVMEMVDGHALVISLMATALIASAVSKVFAPPLYETLAERYL 103
           VIVMEM+DGHALVISLMATALIAS VS++FAPPLYE+LAERY+
Sbjct: 388 VIVMEMIDGHALVISLMATALIASRVSRLFAPPLYESLAERYM 430


>ref|ZP_05586563.1| voltage gated chloride channel family protein [Burkholderia
           thailandensis E264]
          Length = 554

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 88/104 (84%), Positives = 97/104 (93%)

Query: 1   MIGSYLPGLPGGIFAPSLSIGAGFGNLLHLLFGGTSLPMLVALAMVGYLAAVTQSPITAF 60
           M+ SYLPG+PGGIFAPSLSIGAGFGNLLH +F G  LPML+ALAMVGYLAAVTQSPIT+F
Sbjct: 326 MVASYLPGIPGGIFAPSLSIGAGFGNLLHFVFSGMHLPMLIALAMVGYLAAVTQSPITSF 385

Query: 61  VIVMEMVDGHALVISLMATALIASAVSKVFAPPLYETLAERYLK 104
           VIVMEM++GHALVISLMATALIAS VS++F PPLYETLAERYLK
Sbjct: 386 VIVMEMINGHALVISLMATALIASRVSRLFVPPLYETLAERYLK 429