BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2493.p (493 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003750040.1| signal transduction protein eal domain [Rals... 393 e-107 emb|CCA83531.1| conserved hypothethical protein, putative signal... 393 e-107 emb|CAQ36929.1| signal transduction protein eal domain [Ralstoni... 390 e-106 gb|AEG71993.1| signal transduction protein eal domain protein [R... 389 e-106 ref|ZP_00946159.1| Hypothetical Protein RRSL_00812 [Ralstonia so... 389 e-106 >ref|YP_003750040.1| signal transduction protein eal domain [Ralstonia solanacearum PSI07] emb|CBJ35415.1| conserved hypothethical protein, putative signal transduction protein eal domain [Ralstonia solanacearum PSI07] Length = 531 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 217/489 (44%), Positives = 297/489 (60%), Gaps = 6/489 (1%) Query: 1 MLARWTCPQRGVVSPIDFIDIAERGGVLDVLLLKLLDTVAATLRHWPPELRLAINLSPCQ 60 +L+RWT G V P FI AER G++D LL+++L W + LA NLSP Q Sbjct: 41 VLSRWTEADLGEVPPTVFIPAAERHGLIDTLLVRVLSKACRAAATWGGDFFLAFNLSPLQ 100 Query: 61 FLDGSLLDRLAAVMHQHGLPMSRLQLEITETVLVQDHERTLQTILAARQAGASLSLDDFG 120 + +L + A P+ RLQ+EITE+ LV D + ++AG ++LDDFG Sbjct: 101 LQNAALFSLIRAAAESGRFPLERLQMEITESALVGDMGAAASLVGELKRAGIRIALDDFG 160 Query: 121 TGYSSLTRLQSYPFDEIKIDASFVRTMDQNPDSFRIVLAVAGLGQSLKMHVVAEGIETEH 180 G+S+L RL ++ FD+IKIDASFV+ M+ + DS +IV ++ GLGQSL + VVAEG+ET Sbjct: 161 IGFSNLERLHAFAFDKIKIDASFVQNMEDDSDSRKIVASIIGLGQSLGVDVVAEGVETRA 220 Query: 181 HAHLLKRMGCEFGQGFHLGRPAPLADAARLIGER-GVWSRHSAGIDTSPFQRWHQLDSLY 239 A +L+ +GC GQG+ G P P DAA + R G + A + SPFQR HQL++LY Sbjct: 221 QADILRGLGCGLGQGWLFGHPVPALDAAATLQRRFGEPAAEDALSEASPFQRLHQLEALY 280 Query: 240 RSAPVGLCFLDPLLRVVSANAMMIDLLGGYAGTELEGSPVIDLLNRSEHRPLLQM-VAEV 298 R APV LCF+D R VSAN + +L +G++ G + ++ LQM V +V Sbjct: 281 RHAPVALCFVDGAERCVSANNRFVQILA-CSGSQFIGRSLAEMACCEARVGGLQMAVRQV 339 Query: 299 VDGASPAATEFFNSRTGRTSLLAF-QVVRSDLGELLGISGSAVDITARVSAERTVRDSEE 357 G +PA E G T LAF Q V ++GE +G S +D+T + AER +R+SEE Sbjct: 340 AQGMAPAPVEV--EGQGETCYLAFVQSVHDEVGERIGTSIIMIDVTEQRRAERAIRESEE 397 Query: 358 HFHRAIDLSPNIPWAADAQGVIDYIGPTFEWQPELTTAQRHQQWLARMPEEDRLRVRQEW 417 HF RA DLSP+I WAA G ++Y+GPTF ++ R + W + +DR+RVRQEW Sbjct: 398 HFRRASDLSPDIAWAARPDGTVNYMGPTFGAARNMSVEDRIEAWYGIVHPDDRVRVRQEW 457 Query: 418 LANLPTGRPFRTEFRVLWPDGQWRWMRSRASPHSDSEGRIVRWYGLIVDISTERRLQYRI 477 LA LP+G+PF T FR+ WPDG W W+ SRA PH ++G I RWYGLIVDI+ R L+ RI Sbjct: 458 LAWLPSGQPFETNFRIKWPDGSWHWVNSRARPHYGADGAIDRWYGLIVDITGRRALERRI 517 Query: 478 SALEEQIHR 486 + LE Q+ R Sbjct: 518 AVLERQLDR 526 >emb|CCA83531.1| conserved hypothethical protein, putative signal transduction protein eal domain [blood disease bacterium R229] Length = 531 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 217/489 (44%), Positives = 297/489 (60%), Gaps = 6/489 (1%) Query: 1 MLARWTCPQRGVVSPIDFIDIAERGGVLDVLLLKLLDTVAATLRHWPPELRLAINLSPCQ 60 +L+RWT G V P FI AER G++D LL+++L W + LA NLSP Q Sbjct: 41 VLSRWTEADLGEVPPTVFIPAAERHGLIDTLLVRVLSKACRAAATWGGDFFLAFNLSPLQ 100 Query: 61 FLDGSLLDRLAAVMHQHGLPMSRLQLEITETVLVQDHERTLQTILAARQAGASLSLDDFG 120 + +L + A P+ RLQ+EITE+ LV D + ++AG ++LDDFG Sbjct: 101 LQNAALFSLIRAAAESGRFPLERLQMEITESALVGDMGAAASLVGELKRAGIRIALDDFG 160 Query: 121 TGYSSLTRLQSYPFDEIKIDASFVRTMDQNPDSFRIVLAVAGLGQSLKMHVVAEGIETEH 180 G+S+L RL ++ FD+IKIDASFV+ M+ + DS +IV ++ GLGQSL + VVAEG+ET Sbjct: 161 IGFSNLERLHAFAFDKIKIDASFVQNMEDDSDSRKIVASIIGLGQSLGVDVVAEGVETRA 220 Query: 181 HAHLLKRMGCEFGQGFHLGRPAPLADAARLIGER-GVWSRHSAGIDTSPFQRWHQLDSLY 239 A +L+ +GC GQG+ G P P DAA + R G + A + SPFQR HQL++LY Sbjct: 221 QADILRGLGCGLGQGWLFGHPVPALDAAATLQRRFGEPAAEDALSEASPFQRLHQLEALY 280 Query: 240 RSAPVGLCFLDPLLRVVSANAMMIDLLGGYAGTELEGSPVIDLLNRSEHRPLLQM-VAEV 298 R APV LCF+D R VSAN + +L +G++ G + ++ LQM V +V Sbjct: 281 RHAPVALCFVDGAERCVSANNRFLQILA-CSGSQFIGRSLAEMACCEARVGGLQMAVRQV 339 Query: 299 VDGASPAATEFFNSRTGRTSLLAF-QVVRSDLGELLGISGSAVDITARVSAERTVRDSEE 357 G +PA E G T LAF Q V ++GE +G S +D+T + AER +R+SEE Sbjct: 340 AQGMAPAPVEV--EGQGETCYLAFVQSVHDEVGERIGTSIIMIDVTEQRRAERAIRESEE 397 Query: 358 HFHRAIDLSPNIPWAADAQGVIDYIGPTFEWQPELTTAQRHQQWLARMPEEDRLRVRQEW 417 HF RA DLSP+I WAA G ++Y+GPTF ++ R + W + +DR+RVRQEW Sbjct: 398 HFRRASDLSPDIAWAARPDGTVNYMGPTFGAARNMSVEDRIEAWYGIVHPDDRVRVRQEW 457 Query: 418 LANLPTGRPFRTEFRVLWPDGQWRWMRSRASPHSDSEGRIVRWYGLIVDISTERRLQYRI 477 LA LP+G+PF T FR+ WPDG W W+ SRA PH ++G I RWYGLIVDI+ R L+ RI Sbjct: 458 LAWLPSGQPFETNFRIKWPDGSWHWVNSRARPHYGADGAIDRWYGLIVDITGRRALERRI 517 Query: 478 SALEEQIHR 486 + LE Q+ R Sbjct: 518 AVLERQLDR 526 >emb|CAQ36929.1| signal transduction protein eal domain [Ralstonia solanacearum MolK2] Length = 534 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 217/491 (44%), Positives = 300/491 (61%), Gaps = 6/491 (1%) Query: 1 MLARWTCPQRGVVSPIDFIDIAERGGVLDVLLLKLLDTVAATLRHWPPELRLAINLSPCQ 60 +L+RWT G V P FI +AER G++D LL+++L W + LA NLSP Q Sbjct: 41 VLSRWTEADLGEVPPAVFIPVAERHGLIDRLLVRVLSKACQAAAAWGGDFFLAFNLSPLQ 100 Query: 61 FLDGSLLDRLAAVMHQHGLPMSRLQLEITETVLVQDHERTLQTILAARQAGASLSLDDFG 120 + +L + P++RLQ+EITE+VLV D + ++AG ++LDDFG Sbjct: 101 LQNTALFSLIREAAESGRFPLARLQMEITESVLVGDLGAAASLVGELKRAGIRIALDDFG 160 Query: 121 TGYSSLTRLQSYPFDEIKIDASFVRTMDQNPDSFRIVLAVAGLGQSLKMHVVAEGIETEH 180 G+S+L RLQ++ FD+IKIDASFV+ M+ + DS +IV ++ GLGQSL + VVAEG+ET Sbjct: 161 IGFSNLERLQAFAFDKIKIDASFVQHMEGDSDSRKIVASIIGLGQSLGVDVVAEGVETRA 220 Query: 181 HAHLLKRMGCEFGQGFHLGRPAPLADAARLIGER-GVWSRHSAGIDTSPFQRWHQLDSLY 239 A +L+ +GC GQG+ G P P DAA + R G + A + SPFQR HQL++LY Sbjct: 221 QADILRGLGCGMGQGWLFGHPVPAPDAAATLQRRFGEPAAGDALSEASPFQRLHQLEALY 280 Query: 240 RSAPVGLCFLDPLLRVVSANAMMIDLLGGYAGTELEGSPVIDLLNRSEHRPLLQM-VAEV 298 R APV LCF+D R VSAN + +L +G+ G + ++ + LQ V ++ Sbjct: 281 RHAPVALCFVDSAERCVSANNRFLQILA-CSGSTFIGHSLDEMACCAARVSGLQAAVRQI 339 Query: 299 VDGASPAATEFFNSRTGRTSLLAF-QVVRSDLGELLGISGSAVDITARVSAERTVRDSEE 357 G +PA E G T LAF Q V ++GE +G S +D+T + AER +R+SEE Sbjct: 340 AQGMAPAPVEV--EGQGETCYLAFVQPVHDEVGERIGASIIMIDVTDQRRAERAIRESEE 397 Query: 358 HFHRAIDLSPNIPWAADAQGVIDYIGPTFEWQPELTTAQRHQQWLARMPEEDRLRVRQEW 417 HF RA DLSP+I WAA G ++Y+GPTF ++ R + W M EDR+RVR+EW Sbjct: 398 HFRRASDLSPDIAWAARPDGTVNYMGPTFGAARNMSVEDRIEAWYGIMHPEDRVRVRREW 457 Query: 418 LANLPTGRPFRTEFRVLWPDGQWRWMRSRASPHSDSEGRIVRWYGLIVDISTERRLQYRI 477 LA LP G+PF T+FR+ WPDG W W+ SRA PH ++G I RWYGLIVDI+ R L+ RI Sbjct: 458 LAWLPCGQPFETDFRIQWPDGTWHWVNSRARPHYGADGTIDRWYGLIVDITGRRALERRI 517 Query: 478 SALEEQIHRLR 488 + LE Q+ + R Sbjct: 518 AVLERQLEKYR 528 >gb|AEG71993.1| signal transduction protein eal domain protein [Ralstonia solanacearum Po82] Length = 540 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 218/492 (44%), Positives = 298/492 (60%), Gaps = 8/492 (1%) Query: 1 MLARWTCPQRGVVSPIDFIDIAERGGVLDVLLLKLLDTVAATLRHWPPELRLAINLSPCQ 60 +L+RWT G V P FI AE+ G++D LL+++L W + LA NLSP Q Sbjct: 47 VLSRWTEADLGEVPPAVFIPAAEQHGLIDRLLVRVLSKACQAAASWGGDFFLAFNLSPLQ 106 Query: 61 FLDGSLLDRLAAVMHQHGLPMSRLQLEITETVLVQDHERTLQTILAARQAGASLSLDDFG 120 + +L + P++RLQ+EITE+VLV D + ++AG ++LDDFG Sbjct: 107 LQNTALFSLIREAAESGRFPLARLQMEITESVLVGDLGAAASLVGELKRAGIRIALDDFG 166 Query: 121 TGYSSLTRLQSYPFDEIKIDASFVRTMDQNPDSFRIVLAVAGLGQSLKMHVVAEGIETEH 180 G+S+L RLQ++ FD+IKIDASFV+ M+ + DS +IV ++ GLGQSL + VVAEG+ET Sbjct: 167 IGFSNLERLQAFAFDKIKIDASFVQHMEGDSDSRKIVASIIGLGQSLGVDVVAEGVETRA 226 Query: 181 HAHLLKRMGCEFGQGFHLGRPAPLADAARLIGER-GVWSRHSAGIDTSPFQRWHQLDSLY 239 A +L+ +GC GQG+ G P P DAA + R G + A + SPFQR HQL++LY Sbjct: 227 QADILRGLGCGMGQGWLFGHPVPAPDAAATLQRRFGEPAAGDALSEASPFQRLHQLEALY 286 Query: 240 RSAPVGLCFLDPLLRVVSANAMMIDLLGGYAGTELEGSPVIDLLNRSEHR--PLLQMVAE 297 R APV LCF+D R VSAN + +L GT + S +D + R L V + Sbjct: 287 RHAPVALCFVDGAERCVSANNRFLQILACSGGTFIGHS--LDEMACCAARVSGLQAAVRQ 344 Query: 298 VVDGASPAATEFFNSRTGRTSLLAF-QVVRSDLGELLGISGSAVDITARVSAERTVRDSE 356 + G +PA E G T LAF Q V ++GE +G S +D+T + AER +R+SE Sbjct: 345 IAQGMTPAPVEV--EGQGETCYLAFVQPVHDEVGERIGASIIMIDVTDQRRAERAIRESE 402 Query: 357 EHFHRAIDLSPNIPWAADAQGVIDYIGPTFEWQPELTTAQRHQQWLARMPEEDRLRVRQE 416 EHF RA DLSP+I WAA G ++Y+GPTF ++ R + W M EDR+RVR+E Sbjct: 403 EHFRRASDLSPDIAWAAQPDGTVNYMGPTFGAARNMSVEDRIEAWYGIMHPEDRVRVRRE 462 Query: 417 WLANLPTGRPFRTEFRVLWPDGQWRWMRSRASPHSDSEGRIVRWYGLIVDISTERRLQYR 476 WLA LP G+PF T+FR+ WPDG W W+ SRA PH ++G I RWYGLIVDI+ R L+ R Sbjct: 463 WLAWLPCGQPFETDFRIRWPDGTWHWVNSRARPHYGADGTIDRWYGLIVDITGRRVLERR 522 Query: 477 ISALEEQIHRLR 488 I+ LE Q+ + R Sbjct: 523 IAVLERQLEKYR 534 >ref|ZP_00946159.1| Hypothetical Protein RRSL_00812 [Ralstonia solanacearum UW551] ref|YP_002257809.1| signal transduction protein eal domain [Ralstonia solanacearum IPO1609] gb|EAP71327.1| Hypothetical Protein RRSL_00812 [Ralstonia solanacearum UW551] emb|CAQ59697.1| signal transduction protein eal domain [Ralstonia solanacearum IPO1609] Length = 534 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 217/491 (44%), Positives = 299/491 (60%), Gaps = 6/491 (1%) Query: 1 MLARWTCPQRGVVSPIDFIDIAERGGVLDVLLLKLLDTVAATLRHWPPELRLAINLSPCQ 60 +L+RWT G V P FI AER G++D LL+++L W + LA NLSP Q Sbjct: 41 VLSRWTEADLGEVPPAVFIPAAERHGLIDRLLVRVLSKACQAAAAWGGDFFLAFNLSPLQ 100 Query: 61 FLDGSLLDRLAAVMHQHGLPMSRLQLEITETVLVQDHERTLQTILAARQAGASLSLDDFG 120 + +L + P++RLQ+EITE+VLV D + ++AG ++LDDFG Sbjct: 101 LQNTALFSLIREAAESGRFPLARLQMEITESVLVGDLGAAASLVGELKRAGIRIALDDFG 160 Query: 121 TGYSSLTRLQSYPFDEIKIDASFVRTMDQNPDSFRIVLAVAGLGQSLKMHVVAEGIETEH 180 G+S+L RLQ++ FD+IKIDASFV+ M+ + DS +IV ++ GLGQSL + VVAEG+ET Sbjct: 161 IGFSNLERLQAFAFDKIKIDASFVQHMEGDSDSRKIVASIIGLGQSLGVDVVAEGVETRA 220 Query: 181 HAHLLKRMGCEFGQGFHLGRPAPLADAARLIGER-GVWSRHSAGIDTSPFQRWHQLDSLY 239 A +L+ +GC GQG+ G P P DAA + R G + A + SPFQR HQL++LY Sbjct: 221 QADILRGLGCGMGQGWLFGHPVPAPDAAATLQRRFGEPAAGDALSEASPFQRLHQLEALY 280 Query: 240 RSAPVGLCFLDPLLRVVSANAMMIDLLGGYAGTELEGSPVIDLLNRSEHRPLLQM-VAEV 298 R APV LCF+D R VSAN + +L +G+ G + ++ + LQ V ++ Sbjct: 281 RHAPVALCFVDSAERCVSANNRFLQILA-CSGSTFIGHSLDEMACCAARVSGLQAAVRQI 339 Query: 299 VDGASPAATEFFNSRTGRTSLLAF-QVVRSDLGELLGISGSAVDITARVSAERTVRDSEE 357 G +PA E G T LAF Q V ++GE +G S +D+T + AER +R+SEE Sbjct: 340 AQGMAPAPVEV--EGQGETCYLAFVQPVHDEVGERIGASIIMIDVTDQRRAERAIRESEE 397 Query: 358 HFHRAIDLSPNIPWAADAQGVIDYIGPTFEWQPELTTAQRHQQWLARMPEEDRLRVRQEW 417 HF RA DLSP+I WAA G ++Y+GPTF ++ R + W M EDR+RVR+EW Sbjct: 398 HFRRASDLSPDIAWAARPDGTVNYMGPTFGAARNMSVEDRIEAWYGIMHPEDRVRVRREW 457 Query: 418 LANLPTGRPFRTEFRVLWPDGQWRWMRSRASPHSDSEGRIVRWYGLIVDISTERRLQYRI 477 LA LP G+PF T+FR+ WPDG W W+ SRA PH ++G I RWYGLIVDI+ R L+ RI Sbjct: 458 LAWLPCGQPFETDFRIQWPDGTWHWVNSRARPHYGADGTIDRWYGLIVDITGRRALERRI 517 Query: 478 SALEEQIHRLR 488 + LE Q+ + R Sbjct: 518 AVLERQLEKYR 528