BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2489.p (345 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774134.1| 4-hydroxythreonine-4-phosphate dehydrogenase... 594 e-168 ref|ZP_08273519.1| 4-hydroxythreonine-4-phosphate dehydrogenase ... 457 e-126 ref|YP_004754271.1| 4-hydroxythreonine-4-phosphate dehydrogenase... 456 e-126 ref|YP_001352109.1| 4-hydroxythreonine-4-phosphate dehydrogenase... 442 e-122 ref|YP_001098721.1| 4-hydroxythreonine-4-phosphate dehydrogenase... 442 e-122 >ref|YP_003774134.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ62226.1| 4-hydroxythreonine-4-phosphate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 340 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 317/340 (93%), Positives = 328/340 (96%) Query: 6 MNRPILALTCGEPAGIGPEISLRAAWELRHEARCILLGDAALLAQTAYEIDPQMRVAALS 65 MNRPILALTCGEPAGIGPEISLRAAWELRHE RCILLGDAALLAQ+AYEID QMRVAA+S Sbjct: 1 MNRPILALTCGEPAGIGPEISLRAAWELRHEVRCILLGDAALLAQSAYEIDAQMRVAAIS 60 Query: 66 IQAWRNSGLPNFPVDCLTVIDCPVAEPVRAGVLDARNGRAVLQTLDLAVQGALSGAFAAI 125 IQAWRNSGLP+FP DCLTVIDCPVAEPVR GVLDARNGRAVLQTLDLAVQGALSGAFAAI Sbjct: 61 IQAWRNSGLPHFPTDCLTVIDCPVAEPVRPGVLDARNGRAVLQTLDLAVQGALSGAFAAI 120 Query: 126 VTAPLQKSTINDAGVAFTGHTEYLAEVTNTPQVVMMLAGGDAPHLRVALATTHLALKDVP 185 VTAPLQKSTINDAGVAFTGHTEYLAEVT+TPQVVMMLAGG +PHLRVALATTHLALKDVP Sbjct: 121 VTAPLQKSTINDAGVAFTGHTEYLAEVTHTPQVVMMLAGGQSPHLRVALATTHLALKDVP 180 Query: 186 AAITGESLARTLDILQADLRDKFGIAHPRILVTGLNPHAGENGYLGREEIEVITPALEAA 245 AAIT +SLARTLDIL ADLR KFGIA PRILVTGLNPHAGENGYLGREEIEVI+PALEAA Sbjct: 181 AAITADSLARTLDILHADLRSKFGIARPRILVTGLNPHAGENGYLGREEIEVISPALEAA 240 Query: 246 RARGIDARGPYPADTLFQPKYLEEADCVLAMYHDQGLPVLKFASFGHGINITLGLPLIRT 305 RARGIDARGPYPADTLFQPKYLE+ADCVLAMYHDQGLPVLKFASFGHGINITLGLPLIRT Sbjct: 241 RARGIDARGPYPADTLFQPKYLEDADCVLAMYHDQGLPVLKFASFGHGINITLGLPLIRT 300 Query: 306 SVDHGTALDLAAAGLGHADHGSLCVAIRAAADMARRRAAA 345 SVDHGTALDLAAAGLGHADHGS+ VA+RAAADMARR+ A Sbjct: 301 SVDHGTALDLAAAGLGHADHGSMLVAVRAAADMARRQKRA 340 >ref|ZP_08273519.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33014.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 345 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 243/332 (73%), Positives = 275/332 (82%) Query: 8 RPILALTCGEPAGIGPEISLRAAWELRHEARCILLGDAALLAQTAYEIDPQMRVAALSIQ 67 RP +A+TCGEPAGIGPEI+LRAAWELR E C+L+GDA LA A +IDP + +AA+S+Q Sbjct: 10 RPTIAITCGEPAGIGPEIALRAAWELRDEVNCVLIGDAPFLAILAEQIDPSISLAAISVQ 69 Query: 68 AWRNSGLPNFPVDCLTVIDCPVAEPVRAGVLDARNGRAVLQTLDLAVQGALSGAFAAIVT 127 RN GLP FP L V+D P+A V G LD RNGR+VLQ LD+A++G L+G FAA+VT Sbjct: 70 GVRNDGLPRFPPHRLVVLDSPLAAHVIPGQLDKRNGRSVLQMLDMAIEGTLAGWFAAMVT 129 Query: 128 APLQKSTINDAGVAFTGHTEYLAEVTNTPQVVMMLAGGDAPHLRVALATTHLALKDVPAA 187 APLQKSTINDAGV FTGHTEYLAE T TP VVMMLA LRVALAT HLALK+VPAA Sbjct: 130 APLQKSTINDAGVPFTGHTEYLAEKTGTPHVVMMLAASGEHPLRVALATIHLALKEVPAA 189 Query: 188 ITGESLARTLDILQADLRDKFGIAHPRILVTGLNPHAGENGYLGREEIEVITPALEAARA 247 IT +SL RTLDILQ +L+++FG+A PRILV GLNPHAGE GYLG EEI++I PAL+AARA Sbjct: 190 ITFDSLGRTLDILQRELQERFGLAKPRILVAGLNPHAGEGGYLGHEEIDIIIPALQAARA 249 Query: 248 RGIDARGPYPADTLFQPKYLEEADCVLAMYHDQGLPVLKFASFGHGINITLGLPLIRTSV 307 RGI GPYPADTLFQPKYL++ADCVLAMYHDQGLPVLKFASFGHGINITLGLPLIRTSV Sbjct: 250 RGISVAGPYPADTLFQPKYLKDADCVLAMYHDQGLPVLKFASFGHGINITLGLPLIRTSV 309 Query: 308 DHGTALDLAAAGLGHADHGSLCVAIRAAADMA 339 DHGTALDLAA G+GHADHGS+ AIR A MA Sbjct: 310 DHGTALDLAALGVGHADHGSMVEAIRTAVQMA 341 >ref|YP_004754271.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Collimonas fungivorans Ter331] gb|AEK63448.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Collimonas fungivorans Ter331] Length = 356 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 246/334 (73%), Positives = 278/334 (83%), Gaps = 1/334 (0%) Query: 8 RPILALTCGEPAGIGPEISLRAAWELRHEARCILLGDAALLAQTAYEIDPQMRVAALSIQ 67 RPILA+TCGEPAGIGPE+S+RAAW+LR E +L+GDAA LA A EIDPQ+R+ ALS Q Sbjct: 14 RPILAVTCGEPAGIGPEVSIRAAWQLRDEINSVLIGDAAFLAMIAAEIDPQIRLVALSQQ 73 Query: 68 AWRNSGLPNFPVDCLTVIDCPVAEPVRAGVLDARNGRAVLQTLDLAVQGALSGAFAAIVT 127 A RN+GLPNFP + VIDCP+ V+ G+L+ARNGRAVL+TLD+A+ GA G F +VT Sbjct: 74 ALRNNGLPNFPPGQIAVIDCPLDAHVQPGLLNARNGRAVLRTLDIAINGAQQGIFDGMVT 133 Query: 128 APLQKSTINDAGVAFTGHTEYLAEVTNTPQVVMMLAGG-DAPHLRVALATTHLALKDVPA 186 APLQKSTINDAGV FTGHTEYLAE + T QVVMMLA P LRVALATTHLALKDV A Sbjct: 134 APLQKSTINDAGVPFTGHTEYLAEKSATAQVVMMLATDRTTPPLRVALATTHLALKDVAA 193 Query: 187 AITGESLARTLDILQADLRDKFGIAHPRILVTGLNPHAGENGYLGREEIEVITPALEAAR 246 A+T +SL+ T+DIL ADL+ KFG+A PRILVTGLNPHAGE GYLGREEI++I PALEAA+ Sbjct: 194 ALTFDSLSHTIDILHADLQKKFGLAQPRILVTGLNPHAGEGGYLGREEIDIIAPALEAAK 253 Query: 247 ARGIDARGPYPADTLFQPKYLEEADCVLAMYHDQGLPVLKFASFGHGINITLGLPLIRTS 306 ARGI GPYPADTLFQ KYL +ADCVLAMYHDQGLPVLK+ASFGHGINITLGLP IRTS Sbjct: 254 ARGIAVSGPYPADTLFQQKYLADADCVLAMYHDQGLPVLKYASFGHGINITLGLPFIRTS 313 Query: 307 VDHGTALDLAAAGLGHADHGSLCVAIRAAADMAR 340 VDHGTALDLAAAGLG ADHGS+ A+ AA M R Sbjct: 314 VDHGTALDLAAAGLGRADHGSMLAALSVAAQMVR 347 >ref|YP_001352109.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Janthinobacterium sp. Marseille] sp|A6SV12|PDXA_JANMA RecName: Full=4-hydroxythreonine-4-phosphate dehydrogenase; AltName: Full=4-(phosphohydroxy)-L-threonine dehydrogenase gb|ABR88849.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Janthinobacterium sp. Marseille] Length = 343 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 242/322 (75%), Positives = 272/322 (84%), Gaps = 1/322 (0%) Query: 8 RPILALTCGEPAGIGPEISLRAAWELRHEARCILLGDAALLAQTAYEIDPQMRVAALSIQ 67 RP +A+T GEPAGIGPEIS+RAAWELR + + IL+GDAA LA TA I+P +R++ALS+Q Sbjct: 4 RPTIAITSGEPAGIGPEISIRAAWELRADVKSILIGDAAFLAMTAAAINPAIRLSALSLQ 63 Query: 68 AWRNSGLPNFPVDCLTVIDCPVAEPVRAGVLDARNGRAVLQTLDLAVQGALSGAFAAIVT 127 A RNSG+P+F D + VIDCP+A V G LDA+NGR VLQTLD+ ++GA G F AIVT Sbjct: 64 AVRNSGVPDFSRDQIAVIDCPLAAHVVPGKLDAQNGRYVLQTLDIGIEGAQQGWFDAIVT 123 Query: 128 APLQKSTINDAGVAFTGHTEYLAEVTNTPQVVMMLAGGDAPH-LRVALATTHLALKDVPA 186 APLQKSTINDAGV FTGHTEYLA+ TNT QVVMMLA P LRV LATTHLALKDV A Sbjct: 124 APLQKSTINDAGVPFTGHTEYLADKTNTAQVVMMLATNATPQPLRVGLATTHLALKDVAA 183 Query: 187 AITGESLARTLDILQADLRDKFGIAHPRILVTGLNPHAGENGYLGREEIEVITPALEAAR 246 AIT +SLA LDIL ADL++KFGIA PRILV GLNPHAGE GYLGREEIEVITP L+AA+ Sbjct: 184 AITIDSLAGILDILLADLQNKFGIAKPRILVAGLNPHAGEGGYLGREEIEVITPVLQAAQ 243 Query: 247 ARGIDARGPYPADTLFQPKYLEEADCVLAMYHDQGLPVLKFASFGHGINITLGLPLIRTS 306 A+G D RGPYPADTLFQ KYLE+ADCVLAMYHDQGLPVLK+ASFG G+NITLGLPLIRTS Sbjct: 244 AKGFDVRGPYPADTLFQQKYLEDADCVLAMYHDQGLPVLKYASFGLGVNITLGLPLIRTS 303 Query: 307 VDHGTALDLAAAGLGHADHGSL 328 VDHGTALDLAAAGLG ADHGS+ Sbjct: 304 VDHGTALDLAAAGLGQADHGSM 325 >ref|YP_001098721.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Herminiimonas arsenicoxydans] sp|A4G255|PDXA_HERAR RecName: Full=4-hydroxythreonine-4-phosphate dehydrogenase; AltName: Full=4-(phosphohydroxy)-L-threonine dehydrogenase emb|CAL60592.1| 4-hydroxythreonine-4-phosphate dehydrogenase (4-(phosphohydroxy)-L-threonine dehydrogenase) [Herminiimonas arsenicoxydans] Length = 344 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 242/327 (74%), Positives = 270/327 (82%), Gaps = 1/327 (0%) Query: 8 RPILALTCGEPAGIGPEISLRAAWELRHEARCILLGDAALLAQTAYEIDPQMRVAALSIQ 67 RP +A+TCGEPAGIGPEIS+RAAWELR + + IL+GDAA LA A I+P + ++ALS Q Sbjct: 4 RPTIAITCGEPAGIGPEISIRAAWELRADVKSILIGDAAFLAMIAGAINPDIHLSALSWQ 63 Query: 68 AWRNSGLPNFPVDCLTVIDCPVAEPVRAGVLDARNGRAVLQTLDLAVQGALSGAFAAIVT 127 A RNSGLP FP D +TVIDCP+A V G LDA+NGR VLQTLD+A+ GA+ F AIVT Sbjct: 64 AVRNSGLPAFPRDQITVIDCPLAAHVVPGRLDAQNGRYVLQTLDIAIDGAMQHWFDAIVT 123 Query: 128 APLQKSTINDAGVAFTGHTEYLAEVTNTPQVVMMLAGGDAPH-LRVALATTHLALKDVPA 186 APLQKSTINDAGV FTGHTEYLA+ T T QVVMMLA LRVALATTHLALKDV A Sbjct: 124 APLQKSTINDAGVPFTGHTEYLADKTATKQVVMMLATNATLQPLRVALATTHLALKDVAA 183 Query: 187 AITGESLARTLDILQADLRDKFGIAHPRILVTGLNPHAGENGYLGREEIEVITPALEAAR 246 AIT +SLA +DIL ADL+ KFGIA PRILVTGLNPHAGE GYLGREEI+VITP L+AA+ Sbjct: 184 AITFDSLAGIIDILHADLQQKFGIAKPRILVTGLNPHAGEGGYLGREEIDVITPVLQAAQ 243 Query: 247 ARGIDARGPYPADTLFQPKYLEEADCVLAMYHDQGLPVLKFASFGHGINITLGLPLIRTS 306 A+G D RGPYPADTLFQ K L ADCVLAMYHDQGLPVLK+ASFG G+NITLGLP+IRTS Sbjct: 244 AKGYDVRGPYPADTLFQQKLLAGADCVLAMYHDQGLPVLKYASFGLGVNITLGLPIIRTS 303 Query: 307 VDHGTALDLAAAGLGHADHGSLCVAIR 333 VDHGTALDLAAAGLG ADHGS+ AIR Sbjct: 304 VDHGTALDLAAAGLGQADHGSMLEAIR 330