BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2485.p (238 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774130.1| nucleoside-diphosphate-sugar pyrophosphoryla... 459 e-127 ref|YP_001352105.1| nucleotidyl transferase [Janthinobacterium s... 358 3e-97 ref|YP_001098717.1| putative nucleotidyl transferase [Herminiimo... 356 1e-96 ref|YP_004754275.1| putative nucleotidyl transferase [Collimonas... 344 6e-93 ref|ZP_04579543.1| nucleotidyl transferase [Oxalobacter formigen... 344 8e-93 >ref|YP_003774130.1| nucleoside-diphosphate-sugar pyrophosphorylase subunits gamma/epsilon [Herbaspirillum seropedicae SmR1] gb|ADJ62222.1| nucleoside-diphosphate-sugar pyrophosphorylase, gamma/epsilon subunits protein [Herbaspirillum seropedicae SmR1] Length = 238 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 220/238 (92%), Positives = 231/238 (97%) Query: 1 MKAMIFAAGRGERMRPLTDTCPKPLLKVRGRPLIVWQILSLVRAGITEIVINHAHLGQMI 60 MKAMIFAAGRGERMRPLTD+CPKPLLKVRGRPLIVWQILSLVRAGITEIVINHAHLGQMI Sbjct: 1 MKAMIFAAGRGERMRPLTDSCPKPLLKVRGRPLIVWQILSLVRAGITEIVINHAHLGQMI 60 Query: 61 EDTLGDGSRYGAKLFYSPETNALETAGGIAQARHLLGEEPFIAVSGDIWCPHFDYSELLT 120 EDTLGDGSR+GA+L YSPE ALETAGGIAQARHLLGE+PFIAVSGDIWCPHFDYSELLT Sbjct: 61 EDTLGDGSRFGARLLYSPEGTALETAGGIAQARHLLGEQPFIAVSGDIWCPHFDYSELLT 120 Query: 121 VLEDEDPWGNPLPHDKRDLAWLYLVKNPPFHPEGDFALNNFAIANEGQPKLTFANIGVYR 180 VLEDEDPWG PLP D+RD+AWLYLVKNPPFHPEGDFALNNFA+ANEGQPKLTFANIGVYR Sbjct: 121 VLEDEDPWGKPLPEDQRDMAWLYLVKNPPFHPEGDFALNNFALANEGQPKLTFANIGVYR 180 Query: 181 PEMFDGIAPGSHAKLGPLLRQYADQGRIGGDVYRGDWHNVGTIEQLEALNLPPQGTRP 238 P+MFDGI PG+HAKLGPLLRQYADQGRIGGDVYRG+WHNVGTI+QLEALNLPPQG RP Sbjct: 181 PQMFDGIPPGTHAKLGPLLRQYADQGRIGGDVYRGEWHNVGTIDQLEALNLPPQGNRP 238 >ref|YP_001352105.1| nucleotidyl transferase [Janthinobacterium sp. Marseille] gb|ABR90675.1| nucleotidyl transferase [Janthinobacterium sp. Marseille] Length = 238 Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 164/235 (69%), Positives = 202/235 (85%) Query: 1 MKAMIFAAGRGERMRPLTDTCPKPLLKVRGRPLIVWQILSLVRAGITEIVINHAHLGQMI 60 MKAMIFAAGRGERMRPLTDTCPKPLL VRGRPLIVW IL+LVRAGIT+IVINHAHLG +I Sbjct: 1 MKAMIFAAGRGERMRPLTDTCPKPLLTVRGRPLIVWHILNLVRAGITDIVINHAHLGNLI 60 Query: 61 EDTLGDGSRYGAKLFYSPETNALETAGGIAQARHLLGEEPFIAVSGDIWCPHFDYSELLT 120 E+TLGDG+++GA++ YS E ALETAGG+A+ARHLLG+EPF+A++ DI+CPHF++ ++ Sbjct: 61 EETLGDGTQFGARISYSAEGTALETAGGVAKARHLLGDEPFLALAADIYCPHFNFEQVKN 120 Query: 121 VLEDEDPWGNPLPHDKRDLAWLYLVKNPPFHPEGDFALNNFAIANEGQPKLTFANIGVYR 180 VLED D WGNP P D+RD+AWLYLVKNP HP+GDFAL++F++ANEG+PKLTF+ IGVYR Sbjct: 121 VLEDADVWGNPYPVDQRDVAWLYLVKNPAHHPQGDFALHSFSVANEGEPKLTFSGIGVYR 180 Query: 181 PEMFDGIAPGSHAKLGPLLRQYADQGRIGGDVYRGDWHNVGTIEQLEALNLPPQG 235 P MFD IA G AKL LLR+YA +G++GG++Y GDW +VGT+E+L LN P G Sbjct: 181 PSMFDAIAAGESAKLVTLLREYAARGQLGGELYHGDWTDVGTVERLAELNAPLTG 235 >ref|YP_001098717.1| putative nucleotidyl transferase [Herminiimonas arsenicoxydans] emb|CAL60588.1| putative dTDP-glucose pyrophosphorylase RfbA [Herminiimonas arsenicoxydans] Length = 236 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 166/235 (70%), Positives = 198/235 (84%) Query: 1 MKAMIFAAGRGERMRPLTDTCPKPLLKVRGRPLIVWQILSLVRAGITEIVINHAHLGQMI 60 MKAMIFAAGRGERMRPLTDTCPKPLLKVRGRPLIVW IL+LVRAGI +IVINHAHLG MI Sbjct: 1 MKAMIFAAGRGERMRPLTDTCPKPLLKVRGRPLIVWHILNLVRAGIKDIVINHAHLGGMI 60 Query: 61 EDTLGDGSRYGAKLFYSPETNALETAGGIAQARHLLGEEPFIAVSGDIWCPHFDYSELLT 120 E+ LG+G ++GA L YS E ALETAGG+AQARHLLG+EPF+A++ DI+CPHFD+ ++ Sbjct: 61 EEALGNGEQFGANLIYSAEGEALETAGGVAQARHLLGDEPFLALAADIYCPHFDFKQVRG 120 Query: 121 VLEDEDPWGNPLPHDKRDLAWLYLVKNPPFHPEGDFALNNFAIANEGQPKLTFANIGVYR 180 VLED D WGNP P D+RD+AWLYLVKNP H +GDFAL++F+IANEG+P+LTF+ IGVYR Sbjct: 121 VLEDNDVWGNPYPLDQRDVAWLYLVKNPSHHLQGDFALHSFSIANEGEPRLTFSGIGVYR 180 Query: 181 PEMFDGIAPGSHAKLGPLLRQYADQGRIGGDVYRGDWHNVGTIEQLEALNLPPQG 235 P MFD I G AKL PLLR+YA +G++GG++YRGDW +VGT E+L LN P G Sbjct: 181 PSMFDSITAGESAKLAPLLREYAARGQVGGELYRGDWTDVGTAERLAELNAPLTG 235 >ref|YP_004754275.1| putative nucleotidyl transferase [Collimonas fungivorans Ter331] gb|AEK63452.1| putative nucleotidyl transferase [Collimonas fungivorans Ter331] Length = 235 Score = 344 bits (883), Expect = 6e-93, Method: Composition-based stats. Identities = 162/234 (69%), Positives = 195/234 (83%), Gaps = 2/234 (0%) Query: 1 MKAMIFAAGRGERMRPLTDTCPKPLLKVRGRPLIVWQILSLVRAGITEIVINHAHLGQMI 60 MKAMIFAAGRGERMRPLTDT PKPLLKVRGRPLIVW I++LVRAGITEIVINHAHLGQMI Sbjct: 1 MKAMIFAAGRGERMRPLTDTTPKPLLKVRGRPLIVWHIVNLVRAGITEIVINHAHLGQMI 60 Query: 61 EDTLGDGSRYGAKLFYSPETNALETAGGIAQARHLLGEEPFIAVSGDIWCPHFDYSELLT 120 EDTLGDGS++GA + YSPE ALETAGGIA ARHLLGE PF+A++GD++CPHFD++++ Sbjct: 61 EDTLGDGSKFGATIAYSPEAVALETAGGIANARHLLGEAPFVAIAGDVYCPHFDFAQVKH 120 Query: 121 VLEDEDPWGNPLPHDKRDLAWLYLVKNPPFHPEGDFALNNFAIANEGQP--KLTFANIGV 178 LED D WG P DKRD AWLYLVKNPP HP+GDF L++F+++N+G+ TF+ IGV Sbjct: 121 TLEDNDIWGQPYALDKRDNAWLYLVKNPPHHPQGDFGLHSFSVSNDGEAGHTYTFSGIGV 180 Query: 179 YRPEMFDGIAPGSHAKLGPLLRQYADQGRIGGDVYRGDWHNVGTIEQLEALNLP 232 YRP+MFD + G KL LLR+YA +G+IGG++YRG+W +VGTIE+L LN P Sbjct: 181 YRPDMFDAVNAGQPEKLVTLLREYAARGQIGGEIYRGEWTDVGTIERLNQLNAP 234 >ref|ZP_04579543.1| nucleotidyl transferase [Oxalobacter formigenes OXCC13] gb|EEO30516.1| nucleotidyl transferase [Oxalobacter formigenes OXCC13] Length = 238 Score = 344 bits (882), Expect = 8e-93, Method: Composition-based stats. Identities = 155/230 (67%), Positives = 189/230 (82%) Query: 1 MKAMIFAAGRGERMRPLTDTCPKPLLKVRGRPLIVWQILSLVRAGITEIVINHAHLGQMI 60 MKAMIFAAGRG RMRPLTDTCPKPLLKVRGRPLIVW I++LVRAGITEIVINHAHLG+ I Sbjct: 1 MKAMIFAAGRGNRMRPLTDTCPKPLLKVRGRPLIVWHIVNLVRAGITEIVINHAHLGEQI 60 Query: 61 EDTLGDGSRYGAKLFYSPETNALETAGGIAQARHLLGEEPFIAVSGDIWCPHFDYSELLT 120 E+ LGDGSRYGA + YS E +ALETAGGIA+ARHLLGE+PF+ ++ D++CP+FD+ E+ T Sbjct: 61 EEMLGDGSRYGAAISYSHEESALETAGGIAKARHLLGEDPFVTIAADVYCPYFDFEEVKT 120 Query: 121 VLEDEDPWGNPLPHDKRDLAWLYLVKNPPFHPEGDFALNNFAIANEGQPKLTFANIGVYR 180 VL+D D WG P RD+AWLYLV NPPFHP GDFALN+F + NEG+PK T++ IGV+R Sbjct: 121 VLQDNDVWGKPYDLASRDVAWLYLVPNPPFHPHGDFALNSFTVKNEGEPKWTYSGIGVFR 180 Query: 181 PEMFDGIAPGSHAKLGPLLRQYADQGRIGGDVYRGDWHNVGTIEQLEALN 230 MFD + G +LG LLR+Y +G +GG++YRG+W NV TIE+L+ LN Sbjct: 181 MSMFDSVQAGEKMQLGTLLREYISRGLVGGEIYRGEWKNVNTIEELDRLN 230