BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2479.p (178 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774124.1| aspartate 1-decarboxylase precursor protein ... 240 7e-62 ref|YP_004754281.1| aspartate 1-decarboxylase [Collimonas fungiv... 218 2e-55 ref|ZP_00943801.1| Aspartate 1-decarboxylase [Ralstonia solanace... 206 1e-51 ref|YP_002006597.1| aspartate alpha-decarboxylase [Cupriavidus t... 203 9e-51 ref|YP_727572.1| aspartate alpha-decarboxylase [Ralstonia eutrop... 203 1e-50 >ref|YP_003774124.1| aspartate 1-decarboxylase precursor protein [Herbaspirillum seropedicae SmR1] gb|ADJ62216.1| aspartate 1-decarboxylase precursor protein [Herbaspirillum seropedicae SmR1] Length = 120 Score = 240 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 119/120 (99%), Positives = 120/120 (100%) Query: 59 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 118 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI Sbjct: 1 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60 Query: 119 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVASYKPKVVFVDDKNRITSLKAI 178 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVA+YKPKVVFVDDKNRITSLKAI Sbjct: 61 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVATYKPKVVFVDDKNRITSLKAI 120 >ref|YP_004754281.1| aspartate 1-decarboxylase [Collimonas fungivorans Ter331] gb|AEK63458.1| Aspartate 1-decarboxylase [Collimonas fungivorans Ter331] Length = 157 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 108/123 (87%), Positives = 114/123 (92%) Query: 56 KKYMQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFST 115 K+ MQRIMLRAKIHRA+VTQ DL+YEGSCGIDEDLLEAADIREFEKIELYNVNNG+RFST Sbjct: 35 KQDMQRIMLRAKIHRATVTQADLHYEGSCGIDEDLLEAADIREFEKIELYNVNNGQRFST 94 Query: 116 YAIRGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVASYKPKVVFVDDKNRITSL 175 YAIRGKRGSGEISLNGAAAR AHLGDLLIICTYAP+S+EE SY PKVVFVDD NRIT L Sbjct: 95 YAIRGKRGSGEISLNGAAARCAHLGDLLIICTYAPLSNEEAGSYVPKVVFVDDNNRITGL 154 Query: 176 KAI 178 K I Sbjct: 155 KKI 157 >ref|ZP_00943801.1| Aspartate 1-decarboxylase [Ralstonia solanacearum UW551] gb|EAP73652.1| Aspartate 1-decarboxylase [Ralstonia solanacearum UW551] Length = 179 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 110/174 (63%), Positives = 129/174 (74%), Gaps = 3/174 (1%) Query: 8 STRKTISSRPRCSARVARSCA--NESAGPGRQKTRAFSVPLTPITFE-TRRKKYMQRIML 64 ST KT S P C AR A C A P R P F ++++MQR ML Sbjct: 6 STAKTTSWPPACCARPANWCVLPPPRAPPNNPGDRGGHKPCRAWRFHFCFKERFMQRNML 65 Query: 65 RAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAIRGKRGS 124 RAK+HRA+VTQ DL+YEGSCGIDEDLL+AAD+RE+EKIELYNVNNGERFSTY I+GKRGS Sbjct: 66 RAKLHRATVTQADLDYEGSCGIDEDLLDAADMREYEKIELYNVNNGERFSTYIIKGKRGS 125 Query: 125 GEISLNGAAARLAHLGDLLIICTYAPMSDEEVASYKPKVVFVDDKNRITSLKAI 178 GEISLNGAAAR AH+GD LIICTYAPM++EE+A YKPK+V + D NRI +KA+ Sbjct: 126 GEISLNGAAARRAHVGDKLIICTYAPMTEEEIAGYKPKIVLLGDNNRIKEIKAV 179 >ref|YP_002006597.1| aspartate alpha-decarboxylase [Cupriavidus taiwanensis LMG 19424] sp|B3R6Q3|PAND_CUPTR RecName: Full=Aspartate 1-decarboxylase; AltName: Full=Aspartate alpha-decarboxylase; Contains: RecName: Full=Aspartate 1-decarboxylase beta chain; Contains: RecName: Full=Aspartate 1-decarboxylase alpha chain; Flags: Precursor emb|CAQ70536.1| aspartate 1-decarboxylase [Cupriavidus taiwanensis LMG 19424] Length = 120 Score = 203 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 94/120 (78%), Positives = 110/120 (91%) Query: 59 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 118 MQRIMLRAK+HR +VTQ DLNYEGSCGID+DLL+AAD++EFEKIELYNVNNGERFSTY I Sbjct: 1 MQRIMLRAKLHRVTVTQADLNYEGSCGIDQDLLDAADMKEFEKIELYNVNNGERFSTYII 60 Query: 119 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVASYKPKVVFVDDKNRITSLKAI 178 +G+RGSGEISLNGAAAR AHLGD LIICTYAPM+DEE+A+YKPKV+ V++KN I +K + Sbjct: 61 KGERGSGEISLNGAAARRAHLGDQLIICTYAPMTDEEIATYKPKVILVNEKNGIKEIKKV 120 >ref|YP_727572.1| aspartate alpha-decarboxylase [Ralstonia eutropha H16] sp|Q9ZHI5|PAND_RALEH RecName: Full=Aspartate 1-decarboxylase; AltName: Full=Aspartate alpha-decarboxylase; Contains: RecName: Full=Aspartate 1-decarboxylase beta chain; Contains: RecName: Full=Aspartate 1-decarboxylase alpha chain; Flags: Precursor gb|AAC67386.1| aspartate-1-decarboxylase [Ralstonia eutropha H16] emb|CAJ94204.1| Aspartate 1-decarboxylase [Ralstonia eutropha H16] Length = 120 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 95/118 (80%), Positives = 109/118 (92%) Query: 59 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 118 MQRIMLRAK+HR +VTQ DLNYEGSCGID+DLL+AAD++EFEKIELYNVNNGERFSTY I Sbjct: 1 MQRIMLRAKLHRVTVTQADLNYEGSCGIDQDLLDAADMKEFEKIELYNVNNGERFSTYII 60 Query: 119 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVASYKPKVVFVDDKNRITSLK 176 +G+RGSGEISLNGAAAR AHLGD LIICTYAPMSDEE+A+YKPKV+ V++KN I +K Sbjct: 61 KGERGSGEISLNGAAARRAHLGDQLIICTYAPMSDEEIAAYKPKVILVNEKNGIKEIK 118