BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2474.p         (62 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004754512.1| hypothetical protein CFU_3865 [Collimonas fu...    68   6e-10
ref|YP_001098677.1| hypothetical protein HEAR0322 [Herminiimonas...    58   5e-07

>ref|YP_004754512.1| hypothetical protein CFU_3865 [Collimonas fungivorans Ter331]
 gb|AEK63689.1| hypothetical protein CFU_3865 [Collimonas fungivorans Ter331]
          Length = 74

 Score = 67.8 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/46 (80%), Positives = 41/46 (89%)

Query: 17 TTANGTPITRIKSTDLFRQMRELEIDHGGRIYKLRLTQLNKLILTA 62
          T +  + +TRIKS DLF+QMRELEIDHGGRIYKLRLTQLNKLILTA
Sbjct: 29 TKSVASAVTRIKSQDLFKQMRELEIDHGGRIYKLRLTQLNKLILTA 74


>ref|YP_001098677.1| hypothetical protein HEAR0322 [Herminiimonas arsenicoxydans]
 emb|CAL60548.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 64

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/44 (72%), Positives = 36/44 (81%)

Query: 19 ANGTPITRIKSTDLFRQMRELEIDHGGRIYKLRLTQLNKLILTA 62
          A    +TRI S DLF+QMRE+EI H GRIY+LRLTQLNKLILTA
Sbjct: 21 AEEQAVTRINSRDLFQQMREVEIAHEGRIYRLRLTQLNKLILTA 64