BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2473.p         (82 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774120.1| hypothetical protein Hsero_0693 [Herbaspiril...   122   1e-26
ref|YP_004754513.1| hypothetical protein CFU_3866 [Collimonas fu...   109   1e-22
ref|YP_001352057.1| hypothetical protein mma_0367 [Janthinobacte...   100   9e-20
ref|YP_001098676.1| doubtful CDS [Herminiimonas arsenicoxydans] ...    98   5e-19
ref|ZP_08275607.1| hypothetical protein IMCC9480_614 [Oxalobacte...    73   1e-11

>ref|YP_003774120.1| hypothetical protein Hsero_0693 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62212.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 107

 Score =  122 bits (307), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 69/74 (93%), Positives = 71/74 (95%)

Query: 1  MVNENMTSTFVEPNGAPAQPELLVSAVLHLMSHYTANNSQETQSCVKLASVIERHLKALA 60
          MV +NMTS FVEPNGAPAQPELLVSAVLHLMSHYTANNSQETQSCVKLASVIERHLKALA
Sbjct: 1  MVTDNMTSAFVEPNGAPAQPELLVSAVLHLMSHYTANNSQETQSCVKLASVIERHLKALA 60

Query: 61 DLPNLAPVLRATCH 74
          +LPNLAPVLRATC 
Sbjct: 61 ELPNLAPVLRATCQ 74


>ref|YP_004754513.1| hypothetical protein CFU_3866 [Collimonas fungivorans Ter331]
 gb|AEK63690.1| hypothetical protein CFU_3866 [Collimonas fungivorans Ter331]
          Length = 108

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 62/73 (84%), Positives = 64/73 (87%), Gaps = 1/73 (1%)

Query: 1  MVNENMTSTFVEPNGAPAQPELLVSAVLHLMSHYTANNSQETQSCVKLASVIERHLKALA 60
          MV+E +   FVEPNGAPAQPELLVSAVLHLMS YTAN SQE   CVKLASVIERHLKALA
Sbjct: 3  MVSEKINPAFVEPNGAPAQPELLVSAVLHLMSQYTAN-SQEISGCVKLASVIERHLKALA 61

Query: 61 DLPNLAPVLRATC 73
          DLPNLAPVLRATC
Sbjct: 62 DLPNLAPVLRATC 74


>ref|YP_001352057.1| hypothetical protein mma_0367 [Janthinobacterium sp. Marseille]
 gb|ABR91835.1| Hypothetical protein mma_0367 [Janthinobacterium sp. Marseille]
          Length = 106

 Score =  100 bits (248), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 58/74 (78%), Positives = 61/74 (82%), Gaps = 1/74 (1%)

Query: 1  MVNENMTSTFVEPNGAPAQPELLVSAVLHLMSHYTANNSQETQSCVKLASVIERHLKALA 60
          M  E       EPN APAQPELLVSAVLHLMSHYTANN QE+ SC+KLASVIERHLKALA
Sbjct: 1  MAIEKAQQALQEPNAAPAQPELLVSAVLHLMSHYTANN-QESSSCIKLASVIERHLKALA 59

Query: 61 DLPNLAPVLRATCH 74
          DLP+LAPVLRATC 
Sbjct: 60 DLPDLAPVLRATCQ 73


>ref|YP_001098676.1| doubtful CDS [Herminiimonas arsenicoxydans]
 emb|CAL60547.1| hypothetical protein HEAR0321 [Herminiimonas arsenicoxydans]
          Length = 106

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 57/74 (77%), Positives = 60/74 (81%), Gaps = 1/74 (1%)

Query: 1  MVNENMTSTFVEPNGAPAQPELLVSAVLHLMSHYTANNSQETQSCVKLASVIERHLKALA 60
          M  E  T    EPN APAQPELLVSAVLHLMSHYTA+N QE  SC+KLASVIERHLKALA
Sbjct: 1  MAIEKATQALQEPNAAPAQPELLVSAVLHLMSHYTASN-QENSSCIKLASVIERHLKALA 59

Query: 61 DLPNLAPVLRATCH 74
          +LP LAPVLRATC 
Sbjct: 60 ELPELAPVLRATCQ 73


>ref|ZP_08275607.1| hypothetical protein IMCC9480_614 [Oxalobacteraceae bacterium
          IMCC9480]
 gb|EGF30918.1| hypothetical protein IMCC9480_614 [Oxalobacteraceae bacterium
          IMCC9480]
          Length = 80

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/50 (84%), Positives = 45/50 (90%), Gaps = 2/50 (4%)

Query: 24 VSAVLHLMSHYTANNSQETQSCVKLASVIERHLKALADLPNLAPVLRATC 73
          +SAVLHLMSHYTAN SQE  +CVKLASVIERHLKALADL  +APVLRATC
Sbjct: 1  MSAVLHLMSHYTAN-SQEG-ACVKLASVIERHLKALADLQAIAPVLRATC 48