BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2471.p (243 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774117.1| biopolymer transport transmembrane protein [... 419 e-115 ref|YP_004754516.1| MotA/TolQ/ExbB proton channel family protein... 370 e-100 ref|YP_001352054.1| biopolymer transport protein ExbB [Janthinob... 359 2e-97 ref|YP_001098673.1| biopolymer transport ExbB protein [Herminiim... 356 1e-96 ref|ZP_08274158.1| MotA/TolQ/ExbB proton channel family protein ... 330 1e-88 >ref|YP_003774117.1| biopolymer transport transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62209.1| biopolymer transport transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 243 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 235/243 (96%), Positives = 237/243 (97%) Query: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIFTKAFQLLRFRKASAAAGHQFWD 60 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVI TKA QLLR RKASAAAGHQFWD Sbjct: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWD 60 Query: 61 TTSLPEGVATLGHDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS 120 TT+LPEGVATLG DNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS Sbjct: 61 TTNLPEGVATLGQDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS 120 Query: 121 GKLQTGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL 180 GKLQ GMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL Sbjct: 121 GKLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL 180 Query: 181 GLAVAIPATFGYNALVRGNKTTIAKLNKFGFDLHALFVTGARAAGEDGQPNGGKAKLTAV 240 GLAVAIPATFGYNALVRGNKT +AKLNKFGFDLHALFVTGARAAGEDGQPNGGKAKLTAV Sbjct: 181 GLAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGARAAGEDGQPNGGKAKLTAV 240 Query: 241 GRA 243 GRA Sbjct: 241 GRA 243 >ref|YP_004754516.1| MotA/TolQ/ExbB proton channel family protein [Collimonas fungivorans Ter331] gb|AEK63693.1| MotA/TolQ/ExbB proton channel family protein [Collimonas fungivorans Ter331] Length = 246 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 205/246 (83%), Positives = 222/246 (90%), Gaps = 3/246 (1%) Query: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIFTKAFQLLRFRKASAAAGHQFWD 60 MEVSPYGLE+LW+QGDFV K VAVLL+AMSIASWYVI TKA Q+LRF++A+ AAGHQFWD Sbjct: 1 MEVSPYGLEALWSQGDFVIKSVAVLLVAMSIASWYVILTKALQILRFQRAAHAAGHQFWD 60 Query: 61 TTSLPEGVATLGHDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS 120 TTSLPEG+ATLG +NPFAEVA+AGV++M HH AHKGHLHDQLSVSDWVTLSLRQAIDE S Sbjct: 61 TTSLPEGIATLGTENPFAEVAQAGVSSMRHHAAHKGHLHDQLSVSDWVTLSLRQAIDEVS 120 Query: 121 GKLQTGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL 180 GKLQTGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGT+GQASIDKVAGPVGEALIMTAL Sbjct: 121 GKLQTGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTSGQASIDKVAGPVGEALIMTAL 180 Query: 181 GLAVAIPATFGYNALVRGNKTTIAKLNKFGFDLHALFVTGARAAGEDGQPNGGK---AKL 237 GLAVAIPATFGYNALVRGNKT IAKLNKFGFDLHALFVTG+R++ + G AKL Sbjct: 181 GLAVAIPATFGYNALVRGNKTIIAKLNKFGFDLHALFVTGSRSSSNEADHANGSNNGAKL 240 Query: 238 TAVGRA 243 AV A Sbjct: 241 VAVKGA 246 >ref|YP_001352054.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille] gb|ABR90101.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille] Length = 242 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 200/243 (82%), Positives = 220/243 (90%), Gaps = 1/243 (0%) Query: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIFTKAFQLLRFRKASAAAGHQFWD 60 MEVSPYGLESLW+QGDFVTKGVAVLL+AMSIASWYVI TKA QL+++R+A+ AAGH+FWD Sbjct: 1 MEVSPYGLESLWSQGDFVTKGVAVLLVAMSIASWYVIATKALQLMQYRRAARAAGHEFWD 60 Query: 61 TTSLPEGVATLGHDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS 120 TSL EG ATLG+ NPFA++A+AGVTAM HH AHKGHLHDQLSVSDW+TLSLRQAIDE S Sbjct: 61 ATSLTEGTATLGNGNPFADIAEAGVTAMRHHEAHKGHLHDQLSVSDWITLSLRQAIDETS 120 Query: 121 GKLQTGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL 180 KLQ+GMAVLASVGSTAPFVGLFGTVWGIYHALV+IGT+GQASIDKVAGPVGEALIMTAL Sbjct: 121 AKLQSGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQASIDKVAGPVGEALIMTAL 180 Query: 181 GLAVAIPATFGYNALVRGNKTTIAKLNKFGFDLHALFVTGARAAGEDGQPNGGKAKLTAV 240 GLAVAIPATFGYNALVRGNK+ IAK+NKFGFDLHALFVTG+R A + P AKL AV Sbjct: 181 GLAVAIPATFGYNALVRGNKSVIAKMNKFGFDLHALFVTGSR-ANDTNTPGASGAKLVAV 239 Query: 241 GRA 243 G A Sbjct: 240 GGA 242 >ref|YP_001098673.1| biopolymer transport ExbB protein [Herminiimonas arsenicoxydans] emb|CAL60544.1| Biopolymer transport exbB protein [Herminiimonas arsenicoxydans] Length = 242 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 200/243 (82%), Positives = 218/243 (89%), Gaps = 1/243 (0%) Query: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIFTKAFQLLRFRKASAAAGHQFWD 60 MEVSPYGLESLW+QGDFVTKGVA+LL+AMSIASWYVI TKA QL+++R+A+ AAGH+FWD Sbjct: 1 MEVSPYGLESLWSQGDFVTKGVAILLVAMSIASWYVIATKALQLMQYRRAARAAGHEFWD 60 Query: 61 TTSLPEGVATLGHDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS 120 TSL EG ATLG NPFA +A+AGVTAM HH AHKGHLHD+LSVSDW+TLSLRQAIDE S Sbjct: 61 ATSLSEGTATLGSGNPFASIAEAGVTAMRHHEAHKGHLHDELSVSDWITLSLRQAIDETS 120 Query: 121 GKLQTGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL 180 KLQTGMAVLASVGSTAPFVGLFGTVWGIYHALV+IGT+GQASIDKVAGPVGEALIMTAL Sbjct: 121 AKLQTGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQASIDKVAGPVGEALIMTAL 180 Query: 181 GLAVAIPATFGYNALVRGNKTTIAKLNKFGFDLHALFVTGARAAGEDGQPNGGKAKLTAV 240 GLAVAIPATFGYNALVRGNK+ IAK+NKFGFDLHALFVTGAR A + P AKL AV Sbjct: 181 GLAVAIPATFGYNALVRGNKSLIAKMNKFGFDLHALFVTGAR-ANDTNTPGASGAKLVAV 239 Query: 241 GRA 243 G A Sbjct: 240 GGA 242 >ref|ZP_08274158.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32371.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae bacterium IMCC9480] Length = 238 Score = 330 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 174/230 (75%), Positives = 202/230 (87%), Gaps = 1/230 (0%) Query: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIFTKAFQLLRFRKASAAAGHQFWD 60 MEVSPYGLESLW QGD V K VA+LL+AMS+ASW+VI T+ QLLR R+++A G +FWD Sbjct: 1 MEVSPYGLESLWQQGDIVIKAVALLLIAMSVASWFVIITRGVQLLRLRRSAALVGLRFWD 60 Query: 61 TTSLPEGVATLGHDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS 120 +S+ +GV LG DNPFAE+A+AG AM+HH H+GHLHDQLS SDWVT+SLRQ ID+A+ Sbjct: 61 ASSMAQGVERLGRDNPFAELAQAGSAAMAHHATHQGHLHDQLSKSDWVTMSLRQGIDDAA 120 Query: 121 GKLQTGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL 180 G+LQ GMAVLASVGSTAPFVGLFGTVWGIYHALV+IGT+GQA IDKVAGPVGE+LIMTAL Sbjct: 121 GRLQQGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQAGIDKVAGPVGESLIMTAL 180 Query: 181 GLAVAIPATFGYNALVRGNKTTIAKLNKFGFDLHALFVTGARAAGEDGQP 230 GLAVAIPATFGYNALVRGNK+T+A+LNKFGFDLHA FVTGAR +G+D P Sbjct: 181 GLAVAIPATFGYNALVRGNKSTLAQLNKFGFDLHAWFVTGAR-SGQDTPP 229