BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2466.p         (213 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774112.1| cytochrome b561 protein [Herbaspirillum sero...   291   3e-77
ref|YP_004754292.1| cytochrome B561 [Collimonas fungivorans Ter3...   247   7e-64
emb|CAL60537.2| putative cytochrome b561 [Herminiimonas arsenico...   226   2e-57
ref|YP_001352048.1| cytochrome B561 [Janthinobacterium sp. Marse...   223   2e-56
ref|ZP_02882553.1| cytochrome B561 [Burkholderia graminis C4D1M]...   211   4e-53

>ref|YP_003774112.1| cytochrome b561 protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ62204.1| cytochrome b561 protein [Herbaspirillum seropedicae SmR1]
          Length = 174

 Score =  291 bits (746), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 159/174 (91%), Positives = 166/174 (95%)

Query: 40  MERYTKPAVLLHWLIALLIISAFGLGLTMVDIPGLTPTKLKYFSWHKWLGVTVLALVCVR 99
           M+RYTKPA+LLHWLIALLIISAFGLGLTMVDIPGLTPTKLKYFSWHKWLGVTVLAL C R
Sbjct: 1   MDRYTKPAMLLHWLIALLIISAFGLGLTMVDIPGLTPTKLKYFSWHKWLGVTVLALACAR 60

Query: 100 LLWRLTHKAPAYPANMPGWQQSAAHGLHLGLYVLMFAIPVSGYFYSLAAGVPVVYLGVVP 159
           LLWRLTH+APAYPA+MP WQQSAAHGLHLGLY LMFAIPVSGYFYSLAAGVPVVYLGV+P
Sbjct: 61  LLWRLTHRAPAYPAHMPQWQQSAAHGLHLGLYALMFAIPVSGYFYSLAAGVPVVYLGVLP 120

Query: 160 LPVLIAPNPEWKPLLKATHYWLNMTLLAAFALHVLAALKHQFIDRDNIFKRMLP 213
           LPVL+APNPE KPLLK THYWLNM LL AFALHVLAALKHQFIDRDNIFKR+LP
Sbjct: 121 LPVLMAPNPELKPLLKETHYWLNMILLGAFALHVLAALKHQFIDRDNIFKRILP 174


>ref|YP_004754292.1| cytochrome B561 [Collimonas fungivorans Ter331]
 gb|AEK63469.1| Cytochrome B561 [Collimonas fungivorans Ter331]
          Length = 174

 Score =  247 bits (631), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 128/174 (73%), Positives = 148/174 (85%)

Query: 40  MERYTKPAVLLHWLIALLIISAFGLGLTMVDIPGLTPTKLKYFSWHKWLGVTVLALVCVR 99
           M+RYT PA++LHWL+A+LI++ F LGLTMVDIPGLTPTKLKYFSWHKWLGVTVL L CVR
Sbjct: 1   MQRYTTPAIVLHWLVAILIVATFALGLTMVDIPGLTPTKLKYFSWHKWLGVTVLGLACVR 60

Query: 100 LLWRLTHKAPAYPANMPGWQQSAAHGLHLGLYVLMFAIPVSGYFYSLAAGVPVVYLGVVP 159
           LLWR T  AP YP +M  WQQ AAHGLH+ LY+L+FA+P+SGYFYSLAAGVPV YLG+ P
Sbjct: 61  LLWRKTQGAPPYPDSMQPWQQRAAHGLHILLYILIFAVPISGYFYSLAAGVPVTYLGLFP 120

Query: 160 LPVLIAPNPEWKPLLKATHYWLNMTLLAAFALHVLAALKHQFIDRDNIFKRMLP 213
           +PVLIAPNP+ KP+LK  HY LNM +L A +LHVLAALKH FIDRD + KRMLP
Sbjct: 121 MPVLIAPNPDLKPVLKLVHYTLNMIMLGAVSLHVLAALKHHFIDRDGVLKRMLP 174


>emb|CAL60537.2| putative cytochrome b561 [Herminiimonas arsenicoxydans]
          Length = 174

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 119/174 (68%), Positives = 138/174 (79%)

Query: 40  MERYTKPAVLLHWLIALLIISAFGLGLTMVDIPGLTPTKLKYFSWHKWLGVTVLALVCVR 99
           M RYT  A+ LHWL+A+LII+ F LGLTMVDIPGLTPTKLKYFSWHKWLGVT+  L C+R
Sbjct: 1   MRRYTLTAITLHWLMAILIIATFLLGLTMVDIPGLTPTKLKYFSWHKWLGVTIFGLACLR 60

Query: 100 LLWRLTHKAPAYPANMPGWQQSAAHGLHLGLYVLMFAIPVSGYFYSLAAGVPVVYLGVVP 159
           LLWRLTH  PAY   +  WQ+  A+  H  LY+L+FA+P+SGYFY+LAAGVPVVYLG++P
Sbjct: 61  LLWRLTHTPPAYAPGISFWQKKMANTAHGLLYLLIFAVPLSGYFYTLAAGVPVVYLGILP 120

Query: 160 LPVLIAPNPEWKPLLKATHYWLNMTLLAAFALHVLAALKHQFIDRDNIFKRMLP 213
           LPV IAP+PE K LLK  HY  N+TLL  F LHVL ALKHQFIDRD   +RMLP
Sbjct: 121 LPVFIAPDPELKVLLKQVHYAFNVTLLIVFCLHVLGALKHQFIDRDRTLQRMLP 174


>ref|YP_001352048.1| cytochrome B561 [Janthinobacterium sp. Marseille]
 gb|ABR89133.1| Cytochrome B561 [Janthinobacterium sp. Marseille]
          Length = 174

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 119/174 (68%), Positives = 138/174 (79%)

Query: 40  MERYTKPAVLLHWLIALLIISAFGLGLTMVDIPGLTPTKLKYFSWHKWLGVTVLALVCVR 99
           M RYT  A+ LHWL+A+LII+AF LGLTMVDIPGLTPTKLKYFSWHKWLGVTV  L C+R
Sbjct: 1   MRRYTLTAIALHWLMAILIIAAFLLGLTMVDIPGLTPTKLKYFSWHKWLGVTVFGLACLR 60

Query: 100 LLWRLTHKAPAYPANMPGWQQSAAHGLHLGLYVLMFAIPVSGYFYSLAAGVPVVYLGVVP 159
           LLW L+H APA+P +M  WQ+ AA   H  +YVL+FA+P+SGYFYSLAAGVPVVYLG+VP
Sbjct: 61  LLWALSHPAPAHPPSMADWQKKAARVSHGLMYVLIFAVPLSGYFYSLAAGVPVVYLGIVP 120

Query: 160 LPVLIAPNPEWKPLLKATHYWLNMTLLAAFALHVLAALKHQFIDRDNIFKRMLP 213
           LPV I P+ E K LLK  HY  N+TLL  F LH+LA +KHQ IDRD   +RMLP
Sbjct: 121 LPVFIGPDQELKALLKQVHYACNVTLLIVFFLHILAVIKHQLIDRDRTLQRMLP 174


>ref|ZP_02882553.1| cytochrome B561 [Burkholderia graminis C4D1M]
 gb|EDT11756.1| cytochrome B561 [Burkholderia graminis C4D1M]
          Length = 186

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 113/173 (65%), Positives = 130/173 (75%)

Query: 41  ERYTKPAVLLHWLIALLIISAFGLGLTMVDIPGLTPTKLKYFSWHKWLGVTVLALVCVRL 100
           E YT+ A+ +HWLIALLI+  F LG  M DIPG TPTKL+YFSWHKW+GVTV AL  VR+
Sbjct: 11  ESYTRTAIAIHWLIALLIVCGFALGWVMTDIPGFTPTKLRYFSWHKWIGVTVFALAVVRI 70

Query: 101 LWRLTHKAPAYPANMPGWQQSAAHGLHLGLYVLMFAIPVSGYFYSLAAGVPVVYLGVVPL 160
           LWR TH APA P  MP WQ+ AAH +HL LY LM AIPVSGY YS AA VPVVYLG++PL
Sbjct: 71  LWRATHGAPAMPRRMPAWQRGAAHLVHLLLYALMIAIPVSGYLYSSAANVPVVYLGLIPL 130

Query: 161 PVLIAPNPEWKPLLKATHYWLNMTLLAAFALHVLAALKHQFIDRDNIFKRMLP 213
           P LIAP+P  K LLK  H  LN TLL   A+HV AALKHQ++DRD +  RM+P
Sbjct: 131 PRLIAPDPHLKELLKNVHIVLNYTLLTLVAMHVAAALKHQWLDRDGLLSRMIP 183