BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2464.p (190 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774110.1| signal peptide protein [Herbaspirillum serop... 319 1e-85 ref|YP_001352046.1| hypothetical protein mma_0356 [Janthinobacte... 265 2e-69 ref|YP_001098664.1| putative signal peptide [Herminiimonas arsen... 263 6e-69 ref|YP_004754294.1| putative signal peptide protein [Collimonas ... 254 4e-66 ref|YP_001900516.1| YceI family protein [Ralstonia pickettii 12J... 251 4e-65 >ref|YP_003774110.1| signal peptide protein [Herbaspirillum seropedicae SmR1] emb|CAM32615.1| Signal peptide protein [Herbaspirillum seropedicae] gb|ADJ62202.1| signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 190 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 162/168 (96%), Positives = 165/168 (98%) Query: 23 DTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLDRAAKTGTVDITIDTASIDFGMA 82 DTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLDRAAKTGTVDITID ASIDFG A Sbjct: 23 DTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLDRAAKTGTVDITIDAASIDFGHA 82 Query: 83 KMNDHAKSAEMFDVAKYPTAQYKGNIKFNGDKPATVEGELTLHGVTKPVTLTLNKFTCIQ 142 KMN+HAKSA+MFDVAKYPTAQYKGNIKFNGDKPATVEGELTLHGVTKPVTLTLNKF CIQ Sbjct: 83 KMNEHAKSADMFDVAKYPTAQYKGNIKFNGDKPATVEGELTLHGVTKPVTLTLNKFNCIQ 142 Query: 143 HPMLKREVCGGDASASFNRADFGIDYGAKYGFSMETKLAIQVEAVKTN 190 HPMLKREVCGGDASA+FNRADFGIDYGAKYGFSMETKLAIQVEAVKTN Sbjct: 143 HPMLKREVCGGDASATFNRADFGIDYGAKYGFSMETKLAIQVEAVKTN 190 >ref|YP_001352046.1| hypothetical protein mma_0356 [Janthinobacterium sp. Marseille] gb|ABR88459.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 189 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 134/191 (70%), Positives = 159/191 (83%), Gaps = 3/191 (1%) Query: 1 MKLNHLLLALVAAGAAVSANAADTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLD 60 MK L+ L+AAGA S+ A TY+IDPSHTYPSFEADHMG+S+WRGKF+KTSGTV LD Sbjct: 1 MKSKLALICLLAAGA--SSAFAQTYTIDPSHTYPSFEADHMGISVWRGKFEKTSGTVVLD 58 Query: 61 RAAKTGTVDITIDTASIDFGMAKMNDHAKSAEMFDVAKYPTAQYKG-NIKFNGDKPATVE 119 RAAKTG+++I IDT SIDFG AKMN+HAKS ++F+V K+PTA YK +IKF+GDKP +V+ Sbjct: 59 RAAKTGSLEIVIDTNSIDFGHAKMNEHAKSKDIFNVEKFPTATYKSKSIKFDGDKPVSVD 118 Query: 120 GELTLHGVTKPVTLTLNKFTCIQHPMLKREVCGGDASASFNRADFGIDYGAKYGFSMETK 179 GELTL GVTKPVTL +NKF CIQHPMLKREVCG DASA F R+DFG++Y YGFS + K Sbjct: 119 GELTLLGVTKPVTLNINKFKCIQHPMLKREVCGADASAEFKRSDFGLNYALNYGFSPDVK 178 Query: 180 LAIQVEAVKTN 190 LAIQVEAVK + Sbjct: 179 LAIQVEAVKAD 189 >ref|YP_001098664.1| putative signal peptide [Herminiimonas arsenicoxydans] emb|CAL60535.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 189 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 133/191 (69%), Positives = 158/191 (82%), Gaps = 3/191 (1%) Query: 1 MKLNHLLLALVAAGAAVSANAADTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLD 60 MK L+ L+AA A ++ A TY+IDPSHTYPSFEADHMG+S+WRGKFDKTSG+V LD Sbjct: 1 MKSKIALICLLAASA--TSAFAQTYTIDPSHTYPSFEADHMGISVWRGKFDKTSGSVVLD 58 Query: 61 RAAKTGTVDITIDTASIDFGMAKMNDHAKSAEMFDVAKYPTAQYKGN-IKFNGDKPATVE 119 RAAKTG++D+ +D SIDFG AKMN+HAKS ++F+V K+PTA YK IKF+GDKP +V+ Sbjct: 59 RAAKTGSLDLVVDATSIDFGHAKMNEHAKSKDLFNVEKFPTATYKSKAIKFDGDKPVSVD 118 Query: 120 GELTLHGVTKPVTLTLNKFTCIQHPMLKREVCGGDASASFNRADFGIDYGAKYGFSMETK 179 GELTL GVTKPVTL +NKF CIQHPMLKREVCG DASA+FNR+DFG+ YG YGFS E K Sbjct: 119 GELTLLGVTKPVTLAINKFKCIQHPMLKREVCGADASATFNRSDFGLTYGINYGFSPEVK 178 Query: 180 LAIQVEAVKTN 190 LAIQVEAVK + Sbjct: 179 LAIQVEAVKAD 189 >ref|YP_004754294.1| putative signal peptide protein [Collimonas fungivorans Ter331] gb|AEK63471.1| putative signal peptide protein [Collimonas fungivorans Ter331] Length = 190 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 125/169 (73%), Positives = 143/169 (84%), Gaps = 2/169 (1%) Query: 23 DTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLDRAAKTGTVDITIDTASIDFGMA 82 DTY+IDP+HTYPSF ADHMG+S WRGKF+KTSG+VTLDRAAKTG+VDI ID +S+DFG A Sbjct: 23 DTYTIDPNHTYPSFTADHMGISFWRGKFEKTSGSVTLDRAAKTGSVDIRIDASSLDFGHA 82 Query: 83 KMNDHAKSAEMFDVAKYPTAQYKG-NIKFNGDKPATVEGELTLHGVTKPVTLTLNKFTCI 141 KMN+HA ++FDV KYP YKG ++KF+GDKP V+GELTLHGVTKPVTLT+N F CI Sbjct: 83 KMNEHASGPDIFDVKKYPDVTYKGTSVKFDGDKPVAVDGELTLHGVTKPVTLTINSFKCI 142 Query: 142 QHPMLKREVCGGDASASFNRADFGIDYGAKYGFSMETKLAIQVEAVKTN 190 QHPMLKREVCG DASASFNR+DFGI YG FS E KLAIQVE +KTN Sbjct: 143 QHPMLKREVCGADASASFNRSDFGITYGLPM-FSPEVKLAIQVEGIKTN 190 >ref|YP_001900516.1| YceI family protein [Ralstonia pickettii 12J] gb|ACD28084.1| YceI family protein [Ralstonia pickettii 12J] Length = 198 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 130/192 (67%), Positives = 151/192 (78%), Gaps = 2/192 (1%) Query: 1 MKLNHLLLALVAAGAAVSANAADTYSIDPSHTYPSFEADHMG-VSIWRGKFDKTSGTVTL 59 MKL L+ AL A A + A TY +DPSHTYPSFEADHMG +S WRGKF+K+SGTVTL Sbjct: 1 MKLRTLVAALSAIAATAAFAAPATYQLDPSHTYPSFEADHMGGLSKWRGKFEKSSGTVTL 60 Query: 60 DRAAKTGTVDITIDTASIDFGMAKMNDHAKSAEMFDVAKYPTAQYKGNI-KFNGDKPATV 118 DRAAKTG++D+T+ T SIDFG+AKMN+HAKSAE+FDVAKYPTA +KGN KF GD P Sbjct: 61 DRAAKTGSIDVTVQTDSIDFGLAKMNEHAKSAEIFDVAKYPTATFKGNFTKFKGDVPTEA 120 Query: 119 EGELTLHGVTKPVTLTLNKFTCIQHPMLKREVCGGDASASFNRADFGIDYGAKYGFSMET 178 EG+LTLHGVTKP L ++ F C+QHPMLKREVCG DA F R DFG+DYG YGF+MET Sbjct: 121 EGQLTLHGVTKPAKLEIDAFKCMQHPMLKREVCGADAEMKFKRDDFGVDYGKAYGFNMET 180 Query: 179 KLAIQVEAVKTN 190 KL IQVE VK + Sbjct: 181 KLKIQVEGVKQD 192