BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2463.p (211 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774109.1| pyridoxamine 5'-phosphate oxidase [Herbaspir... 361 4e-98 ref|YP_004754425.1| pyridoxamine 5'-phosphate oxidase [Collimona... 299 2e-79 ref|YP_001354526.1| pyridoxamine 5'-phosphate oxidase [Janthinob... 280 9e-74 ref|ZP_08273319.1| Pyridoxamine 5'-phosphate oxidase [Oxalobacte... 280 1e-73 ref|YP_001100841.1| pyridoxine 5'-phosphate oxidase [Herminiimon... 276 1e-72 >ref|YP_003774109.1| pyridoxamine 5'-phosphate oxidase [Herbaspirillum seropedicae SmR1] emb|CAM32614.1| Pyridoxamine 5`-phosphate oxidase protein [Herbaspirillum seropedicae] gb|ADJ62201.1| pyridoxamine 5'-phosphate oxidase protein [Herbaspirillum seropedicae SmR1] Length = 212 Score = 361 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 190/210 (90%), Positives = 201/210 (95%) Query: 2 SLADLRKDYSRASLSELDTAADPVDQFAVWFDEATKAQIPEPNAMSVATVGADGRPSSRI 61 SLADLRKDYSRASLSE +TAADP+DQFA+WFDEA++AQIPEPNAMSVATVG DGRPSSRI Sbjct: 3 SLADLRKDYSRASLSETETAADPIDQFAIWFDEASRAQIPEPNAMSVATVGKDGRPSSRI 62 Query: 62 VLIKQFDQLGFTWFTNYDSRKGVDVAENPYVALLFHWVELERQVRIEGKIERVTKEESDA 121 VLIKQFDQ GFTWFTNYDSRKG+DVAENPYVALLFHWVELERQVRIEGKIERV++EESDA Sbjct: 63 VLIKQFDQQGFTWFTNYDSRKGIDVAENPYVALLFHWVELERQVRIEGKIERVSQEESDA 122 Query: 122 YFYSRPLASQLGAIASQQSRTVASRETLEQQYEATKQQFGDHPTRPEHWGGYRVIPDRIE 181 YFYSRPLASQLGAIASQQSRTV SRE LEQQYE TKQQFG+HP+RPEHWGGYRVIP+RIE Sbjct: 123 YFYSRPLASQLGAIASQQSRTVESREKLEQQYETTKQQFGEHPSRPEHWGGYRVIPERIE 182 Query: 182 FWQGRPSRMHDRVLYTRSDDGQWQRQRLQP 211 FWQGRPSRMHDRVLYTR GQWQRQRLQP Sbjct: 183 FWQGRPSRMHDRVLYTRDASGQWQRQRLQP 212 >ref|YP_004754425.1| pyridoxamine 5'-phosphate oxidase [Collimonas fungivorans Ter331] gb|AEK63602.1| Pyridoxamine 5'-phosphate oxidase [Collimonas fungivorans Ter331] Length = 217 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 147/210 (70%), Positives = 179/210 (85%) Query: 2 SLADLRKDYSRASLSELDTAADPVDQFAVWFDEATKAQIPEPNAMSVATVGADGRPSSRI 61 S+ADLR DYS+ASLSE D+AADP+ QF WFDEA +A++PE NAMS+ATVG +GRPSSRI Sbjct: 8 SIADLRIDYSQASLSEADSAADPITQFGTWFDEAIQAEVPEANAMSLATVGRNGRPSSRI 67 Query: 62 VLIKQFDQLGFTWFTNYDSRKGVDVAENPYVALLFHWVELERQVRIEGKIERVTKEESDA 121 VLIKQFD+ GFTWFTN+DSRKG ++ E+PY ALLFHWV LERQVRIEGK+ERV++ ESDA Sbjct: 68 VLIKQFDERGFTWFTNFDSRKGHELLEHPYGALLFHWVALERQVRIEGKVERVSESESDA 127 Query: 122 YFYSRPLASQLGAIASQQSRTVASRETLEQQYEATKQQFGDHPTRPEHWGGYRVIPDRIE 181 YF+SRPL S+LGAIAS QS+ + SR+ LE +Y +++FGDHP RP HWGGYR++PD +E Sbjct: 128 YFHSRPLRSRLGAIASAQSQPIGSRDLLEAEYAKAEKEFGDHPPRPNHWGGYRLLPDTVE 187 Query: 182 FWQGRPSRMHDRVLYTRSDDGQWQRQRLQP 211 FWQGR SR+HDR+LYT DG W+RQRLQP Sbjct: 188 FWQGRRSRLHDRILYTLDADGNWRRQRLQP 217 >ref|YP_001354526.1| pyridoxamine 5'-phosphate oxidase [Janthinobacterium sp. Marseille] sp|A6T1X9|PDXH_JANMA RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase; AltName: Full=PNP/PMP oxidase; Short=PNPOx; AltName: Full=Pyridoxal 5'-phosphate synthase gb|ABR88699.1| pyridoxamine 5'-phosphate oxidase [Janthinobacterium sp. Marseille] Length = 211 Score = 280 bits (716), Expect = 9e-74, Method: Composition-based stats. Identities = 138/211 (65%), Positives = 172/211 (81%) Query: 1 MSLADLRKDYSRASLSELDTAADPVDQFAVWFDEATKAQIPEPNAMSVATVGADGRPSSR 60 MS+AD+R DY++A LSELDT DPV QFA WF EA +A++PEPNAMSV+TV A+GRPSSR Sbjct: 1 MSIADIRTDYTQAKLSELDTDPDPVAQFAKWFGEALRAEVPEPNAMSVSTVAANGRPSSR 60 Query: 61 IVLIKQFDQLGFTWFTNYDSRKGVDVAENPYVALLFHWVELERQVRIEGKIERVTKEESD 120 I+LIK FDQ GFTWFTNY+SRKG ++A+NP+ ALLFHW+ LER+VRIEG++ERV+ ES+ Sbjct: 61 ILLIKDFDQRGFTWFTNYESRKGQELAQNPHAALLFHWIPLEREVRIEGRVERVSSAESE 120 Query: 121 AYFYSRPLASQLGAIASQQSRTVASRETLEQQYEATKQQFGDHPTRPEHWGGYRVIPDRI 180 YF SRP+ S+L A+AS QS VA R LE QY + Q+G+HP RPEHWGGYR+ PD I Sbjct: 121 QYFQSRPVKSRLSALASSQSHPVADRTALEAQYAKVEAQYGEHPPRPEHWGGYRLKPDYI 180 Query: 181 EFWQGRPSRMHDRVLYTRSDDGQWQRQRLQP 211 EFWQGR SR+HDR++Y+ +G+WQR RLQP Sbjct: 181 EFWQGRASRLHDRIVYSLDKEGKWQRHRLQP 211 >ref|ZP_08273319.1| Pyridoxamine 5'-phosphate oxidase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33218.1| Pyridoxamine 5'-phosphate oxidase [Oxalobacteraceae bacterium IMCC9480] Length = 211 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 138/211 (65%), Positives = 169/211 (80%) Query: 1 MSLADLRKDYSRASLSELDTAADPVDQFAVWFDEATKAQIPEPNAMSVATVGADGRPSSR 60 MS+ADLRKDYS++SLS D DP+ QF WFDEA AQ+PEPNAMS+ATV ADGRPSSR Sbjct: 1 MSIADLRKDYSQSSLSRADVLDDPIRQFGKWFDEALAAQVPEPNAMSLATVAADGRPSSR 60 Query: 61 IVLIKQFDQLGFTWFTNYDSRKGVDVAENPYVALLFHWVELERQVRIEGKIERVTKEESD 120 IVLIK+FD GF WFTNY SRKG ++ N + ALLFHWVELERQVRIEG++ER++ E++D Sbjct: 61 IVLIKEFDARGFVWFTNYSSRKGQELQHNGHAALLFHWVELERQVRIEGRVERISDEDND 120 Query: 121 AYFYSRPLASQLGAIASQQSRTVASRETLEQQYEATKQQFGDHPTRPEHWGGYRVIPDRI 180 AYF SRPL S++GAIAS QS+ VASR+ LE ++ A + G P RP HWGGYR++PD + Sbjct: 121 AYFNSRPLMSRIGAIASAQSKPVASRQELEARFSAAEVASGPAPVRPAHWGGYRLVPDYL 180 Query: 181 EFWQGRPSRMHDRVLYTRSDDGQWQRQRLQP 211 EFWQGRPSR+HDR+ Y + DG W+R+RLQP Sbjct: 181 EFWQGRPSRLHDRIAYQQVSDGNWERERLQP 211 >ref|YP_001100841.1| pyridoxine 5'-phosphate oxidase [Herminiimonas arsenicoxydans] sp|A4G883|PDXH_HERAR RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase; AltName: Full=PNP/PMP oxidase; Short=PNPOx; AltName: Full=Pyridoxal 5'-phosphate synthase emb|CAL62720.1| Pyridoxamine 5'-phosphate oxidase (PNP/PMP oxidase) (PNPOx) [Herminiimonas arsenicoxydans] Length = 211 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 141/211 (66%), Positives = 167/211 (79%) Query: 1 MSLADLRKDYSRASLSELDTAADPVDQFAVWFDEATKAQIPEPNAMSVATVGADGRPSSR 60 MS+AD+R DY++A LSE DTAADPV QFA WFDEA A++PEPNAM V+TVG +GRPSSR Sbjct: 1 MSIADIRTDYAQADLSETDTAADPVTQFAKWFDEALHAEVPEPNAMGVSTVGENGRPSSR 60 Query: 61 IVLIKQFDQLGFTWFTNYDSRKGVDVAENPYVALLFHWVELERQVRIEGKIERVTKEESD 120 IVLIK FDQ GFTWFTNYDSRKG ++ +NPY ALLFHW+ LER+VRIEG++ERV+ EES+ Sbjct: 61 IVLIKDFDQRGFTWFTNYDSRKGRELEKNPYAALLFHWIALEREVRIEGRVERVSAEESE 120 Query: 121 AYFYSRPLASQLGAIASQQSRTVASRETLEQQYEATKQQFGDHPTRPEHWGGYRVIPDRI 180 YF SRP+ S+L AIAS QS +A R LE QY + Q GD RP HWGGYR+ P+ + Sbjct: 121 QYFQSRPVKSRLSAIASAQSAPIADRAALEAQYAKVEAQHGDSTPRPPHWGGYRLQPEYV 180 Query: 181 EFWQGRPSRMHDRVLYTRSDDGQWQRQRLQP 211 EFWQGR SR+HDR+ YT DGQW RQRLQP Sbjct: 181 EFWQGRRSRLHDRIAYTLQKDGQWTRQRLQP 211