BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2457.p (401 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774102.1| phosphoribosylaminoimidazole carboxylase ATP... 719 0.0 ref|YP_001100849.1| phosphoribosylaminoimidazole carboxylase CO(... 549 e-154 ref|YP_004754430.1| phosphoribosylaminoimidazole carboxylase ATP... 534 e-150 ref|ZP_08274952.1| Phosphoribosylaminoimidazole carboxylase ATPa... 524 e-146 ref|YP_001354533.1| phosphoribosylaminoimidazole carboxylase ATP... 507 e-141 >ref|YP_003774102.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Herbaspirillum seropedicae SmR1] gb|ADJ62194.1| phosphoribosylaminoimidazole carboxylase ATPase subunit protein [Herbaspirillum seropedicae SmR1] Length = 401 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 388/401 (96%), Positives = 394/401 (98%) Query: 1 MTQQSASTLRPAVPSTTPATWLGVMGGGQLGRMFAHAAQSMGFKVAVLEADADCPAGQVA 60 MTQQSAS LRPAVPSTTPATWLGVMGGGQLGRMFAHAAQSMGFKVAVLEADADCPAGQVA Sbjct: 1 MTQQSASPLRPAVPSTTPATWLGVMGGGQLGRMFAHAAQSMGFKVAVLEADADCPAGQVA 60 Query: 61 DRLINAAYDDGPALAELGALCAAITTEFENVSAKSLATLAAQTFVAPAASGVSIAQDRTA 120 DRLINA YDDGPALAELGALCAAITTEFENVSAKSLATLAAQTFVAPAASGVSIAQDRTA Sbjct: 61 DRLINAGYDDGPALAELGALCAAITTEFENVSAKSLATLAAQTFVAPAASGVSIAQDRTA 120 Query: 121 EKAFFTECGSQSGVLPAPHLVINSEADIEGLDANLLPGILKTARMGYDGKGQVRVRSIEE 180 EKAFFTECGSQSGVLPAPHLVINSEADIEGLDANLLPGILKTARMGYDGKGQVRVRS+EE Sbjct: 121 EKAFFTECGSQSGVLPAPHLVINSEADIEGLDANLLPGILKTARMGYDGKGQVRVRSVEE 180 Query: 181 VRAAFAAMGGVTCVLEKMLPLAYEVSVLVARGHDGQAVVYPIAENVHRDGILFTTTVPGP 240 VRAAFA+MGGVTCVLEKMLPLAYEVSVLVARGHDGQAVVYPIAENVHRDGILFTTTVPGP Sbjct: 181 VRAAFASMGGVTCVLEKMLPLAYEVSVLVARGHDGQAVVYPIAENVHRDGILFTTTVPGP 240 Query: 241 NIKADAAARAQQAALQIIGAMHYVGVLCIEFFVLDDGALVVNEMAPRPHNSGHYTIDACV 300 NIKADAAARAQQAALQIIGA+ YVGVLCIEFFVL+DGALVVNEMAPRPHNSGHYTIDACV Sbjct: 241 NIKADAAARAQQAALQIIGALQYVGVLCIEFFVLEDGALVVNEMAPRPHNSGHYTIDACV 300 Query: 301 TSQFEQQARAMARLPLGDTRQHSPSVMLNILGDVWYEGDTDAQREPAWDQVLALPGAHLH 360 TSQFEQQARAMARLPLGDTRQHSPSVMLNILGDVWYEGDTD QREPAWDQVLALPGAH+H Sbjct: 301 TSQFEQQARAMARLPLGDTRQHSPSVMLNILGDVWYEGDTDTQREPAWDQVLALPGAHVH 360 Query: 361 LYGKAEARRGRKMGHVTFTGATLADAQRQLATACAILGITL 401 LYGKAEARRGRKMGHVTFTGATLADAQ+QL ACAILGI L Sbjct: 361 LYGKAEARRGRKMGHVTFTGATLADAQQQLTAACAILGIAL 401 >ref|YP_001100849.1| phosphoribosylaminoimidazole carboxylase CO(2)-fixing subunit [Herminiimonas arsenicoxydans] emb|CAL62728.1| Phosphoribosylaminoimidazole carboxylase ATPase subunit (AIR carboxylase) (AIRC) [Herminiimonas arsenicoxydans] Length = 397 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 290/397 (73%), Positives = 319/397 (80%), Gaps = 1/397 (0%) Query: 5 SASTLRPAVPSTTPATWLGVMGGGQLGRMFAHAAQSMGFKVAVLEADADCPAGQVADRLI 64 S + L P PS TWLGVMGGGQLGRMFAHAAQ MGFKVAVLE DCPAG AD+L Sbjct: 2 SKNELSPLNPSAA-GTWLGVMGGGQLGRMFAHAAQQMGFKVAVLEPAFDCPAGHAADQLH 60 Query: 65 NAAYDDGPALAELGALCAAITTEFENVSAKSLATLAAQTFVAPAASGVSIAQDRTAEKAF 124 +A Y D AL +L + CAA+TTEFENVSAKSLA LA TFVAP+AS VSIAQDR AEK F Sbjct: 61 SADYTDVEALTKLASQCAAVTTEFENVSAKSLAFLAESTFVAPSASCVSIAQDRMAEKRF 120 Query: 125 FTECGSQSGVLPAPHLVINSEADIEGLDANLLPGILKTARMGYDGKGQVRVRSIEEVRAA 184 F EC SGV PA H INS ADI+ + +LLPGILKT RMGYDGKGQVRV++ E+ AA Sbjct: 121 FIECAITSGVFPASHKEINSAADIDAVPDDLLPGILKTVRMGYDGKGQVRVKTRAELHAA 180 Query: 185 FAAMGGVTCVLEKMLPLAYEVSVLVARGHDGQAVVYPIAENVHRDGILFTTTVPGPNIKA 244 + M GV CVLEKMLPLAYE+SVL ARG DG+AVVYPIAENVHRDGILFTTTVPGPNI Sbjct: 181 YGGMDGVACVLEKMLPLAYEISVLAARGADGKAVVYPIAENVHRDGILFTTTVPGPNIGK 240 Query: 245 DAAARAQQAALQIIGAMHYVGVLCIEFFVLDDGALVVNEMAPRPHNSGHYTIDACVTSQF 304 +A +AQ A L +I M YVGVLCIEFFVL DG+LVVNEMAPRPHNSGHYTIDACVTSQF Sbjct: 241 KSAEKAQAATLAVIEQMGYVGVLCIEFFVLTDGSLVVNEMAPRPHNSGHYTIDACVTSQF 300 Query: 305 EQQARAMARLPLGDTRQHSPSVMLNILGDVWYEGDTDAQREPAWDQVLALPGAHLHLYGK 364 QQARAMARLPLGD RQHS + MLNILGD+W+ GD+D REPAWDQVLALPGA+LHLYGK Sbjct: 301 AQQARAMARLPLGDVRQHSAAAMLNILGDIWFAGDSDEAREPAWDQVLALPGANLHLYGK 360 Query: 365 AEARRGRKMGHVTFTGATLADAQRQLATACAILGITL 401 ARR RKMGH+TF AT+A+AQ L ACAILGIT+ Sbjct: 361 DTARRARKMGHITFVAATVAEAQANLRQACAILGITV 397 >ref|YP_004754430.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Collimonas fungivorans Ter331] gb|AEK63607.1| Phosphoribosylaminoimidazole carboxylase ATPase subunit [Collimonas fungivorans Ter331] Length = 406 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 285/380 (75%), Positives = 319/380 (83%), Gaps = 1/380 (0%) Query: 21 WLGVMGGGQLGRMFAHAAQSMGFKVAVLEADADCPAGQVADRLINAAYDDGPALAELGAL 80 WLGVMGGGQLGRMF H AQ+MG+KVAVLE + DCP G VADR A Y D AL E+ +L Sbjct: 25 WLGVMGGGQLGRMFTHEAQAMGYKVAVLEPEQDCPTGHVADRHFLADYSDEVALTEMASL 84 Query: 81 CAAITTEFENVSAKSLATLAAQTFVAPAASGVSIAQDRTAEKAFFTECGSQSGVLPAPHL 140 CAA+TTEFENV+A SLA LA +FVAPAA+ VS+AQDR EK FFTEC S VLPAPH Sbjct: 85 CAAVTTEFENVAADSLAILARSSFVAPAAASVSVAQDRMVEKRFFTECAKTSTVLPAPHH 144 Query: 141 VINSEADIEGLDANLLPGILKTARMGYDGKGQVRVRSIEEVRAAFAAMGGVTCVLEKMLP 200 +I S ADIE + +LLPGILKT R+GYDGKGQ RVRS++EVR AFA M GV CVLEKMLP Sbjct: 145 LIESAADIEAIPVDLLPGILKTVRLGYDGKGQARVRSLDEVRQAFAGMNGVACVLEKMLP 204 Query: 201 LAYEVSVLVARGHDGQAVVYPIAENVHRDGILFTTTVPGPNIKADAAARAQQAALQIIGA 260 LAYEVSVLV RG DG+A VYPIAENVHRDGILFTTTVPGPN+ + A RAQ+AAL IIG Sbjct: 205 LAYEVSVLVVRGVDGKAAVYPIAENVHRDGILFTTTVPGPNVCGETAERAQRAALAIIGQ 264 Query: 261 MHYVGVLCIEFFVLDDGALVVNEMAPRPHNSGHYTIDACVTSQFEQQARAMARLPLGDTR 320 ++YVGVLCIEFFVL DG+LVVNEMAPRPHNSGHYT+DACVTSQF QQ RAMAR+PLGDTR Sbjct: 265 LNYVGVLCIEFFVLQDGSLVVNEMAPRPHNSGHYTMDACVTSQFAQQVRAMARMPLGDTR 324 Query: 321 QHSPSVMLNILGDVWYEGDTDAQ-REPAWDQVLALPGAHLHLYGKAEARRGRKMGHVTFT 379 QHSP+VMLNILGDVW+EGD Q REPAWD++LALP AHLHLYGKA+ RR RKMGH+TF Sbjct: 325 QHSPAVMLNILGDVWFEGDDSQQAREPAWDKILALPAAHLHLYGKAQPRRARKMGHITFI 384 Query: 380 GATLADAQRQLATACAILGI 399 AT+A+AQ+QLA ACAILGI Sbjct: 385 AATMAEAQQQLAQACAILGI 404 >ref|ZP_08274952.1| Phosphoribosylaminoimidazole carboxylase ATPase subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF31577.1| Phosphoribosylaminoimidazole carboxylase ATPase subunit [Oxalobacteraceae bacterium IMCC9480] Length = 397 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 274/394 (69%), Positives = 313/394 (79%), Gaps = 1/394 (0%) Query: 7 STLRPA-VPSTTPATWLGVMGGGQLGRMFAHAAQSMGFKVAVLEADADCPAGQVADRLIN 65 S ++PA +PS TPATWLGVMGGGQLGRMF HAAQ+MG+KVAVLE D PA ADR + Sbjct: 2 SDVQPALIPSATPATWLGVMGGGQLGRMFVHAAQAMGYKVAVLEPVDDSPAAHAADRHLV 61 Query: 66 AAYDDGPALAELGALCAAITTEFENVSAKSLATLAAQTFVAPAASGVSIAQDRTAEKAFF 125 A YDD AL EL CAA+TTEFENV A SLA LA V+P+A+ VS+AQDR EK FF Sbjct: 62 ARYDDAGALQELAVQCAAVTTEFENVPAASLALLAQHASVSPSAACVSVAQDRMVEKRFF 121 Query: 126 TECGSQSGVLPAPHLVINSEADIEGLDANLLPGILKTARMGYDGKGQVRVRSIEEVRAAF 185 +C ++SGVLPAPH +I +++DI+ + LLPGILKT R+GYDGKGQ RV ++ E+R AF Sbjct: 122 IDCAARSGVLPAPHQLIAADSDIDTVTDALLPGILKTVRLGYDGKGQARVTTLAELRTAF 181 Query: 186 AAMGGVTCVLEKMLPLAYEVSVLVARGHDGQAVVYPIAENVHRDGILFTTTVPGPNIKAD 245 A M GV CVLEKMLPLAYEVSVL ARGHDG++VVYPIAENVHRDGILFTTTVPGPN+ AD Sbjct: 182 AGMNGVPCVLEKMLPLAYEVSVLAARGHDGKSVVYPIAENVHRDGILFTTTVPGPNVSAD 241 Query: 246 AAARAQQAALQIIGAMHYVGVLCIEFFVLDDGALVVNEMAPRPHNSGHYTIDACVTSQFE 305 A RA AAL II + YVGVLCIEFF+LDDG+LVVNEMAPRPHNSGHYTIDAC+TSQF Sbjct: 242 CAMRAHDAALAIIDQLGYVGVLCIEFFILDDGSLVVNEMAPRPHNSGHYTIDACITSQFA 301 Query: 306 QQARAMARLPLGDTRQHSPSVMLNILGDVWYEGDTDAQREPAWDQVLALPGAHLHLYGKA 365 QQ RAMA L LGD RQHSP+VMLN+LGD+W++ T + EPAWD+VLALPGA LHLYGK Sbjct: 302 QQVRAMAGLTLGDVRQHSPAVMLNLLGDLWFDVATGERTEPAWDRVLALPGASLHLYGKD 361 Query: 366 EARRGRKMGHVTFTGATLADAQRQLATACAILGI 399 + R RKMGHVTF ATL AQ L ACAIL I Sbjct: 362 DPRPSRKMGHVTFVAATLDQAQASLQAACAILRI 395 >ref|YP_001354533.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Janthinobacterium sp. Marseille] gb|ABR88585.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Janthinobacterium sp. Marseille] Length = 361 Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats. Identities = 258/359 (71%), Positives = 288/359 (80%) Query: 41 MGFKVAVLEADADCPAGQVADRLINAAYDDGPALAELGALCAAITTEFENVSAKSLATLA 100 MGFKVAVLE DCPA AD L A Y D AL +L C A+TTEFENVSAKSLA LA Sbjct: 1 MGFKVAVLEPALDCPASHAADYLHCADYTDSDALTKLAGQCVAVTTEFENVSAKSLAFLA 60 Query: 101 AQTFVAPAASGVSIAQDRTAEKAFFTECGSQSGVLPAPHLVINSEADIEGLDANLLPGIL 160 +TFVAP+A VSIAQDR AEK FF EC + SGV PA H INS AD++ + +LLPGIL Sbjct: 61 ERTFVAPSADCVSIAQDRMAEKRFFIECATTSGVFPASHKEINSTADVDAVPDDLLPGIL 120 Query: 161 KTARMGYDGKGQVRVRSIEEVRAAFAAMGGVTCVLEKMLPLAYEVSVLVARGHDGQAVVY 220 KT RMGYDGKGQVRV++ EE+ A+A M GV CVLEKMLPLAYE+SVL ARG DG+AVVY Sbjct: 121 KTVRMGYDGKGQVRVKTREELHNAYAGMNGVACVLEKMLPLAYEISVLAARGADGKAVVY 180 Query: 221 PIAENVHRDGILFTTTVPGPNIKADAAARAQQAALQIIGAMHYVGVLCIEFFVLDDGALV 280 PIAENVHR+GILFTTTVPGPNI +A +AQ A L +I + YVGVLCIEFFVL DG+LV Sbjct: 181 PIAENVHRNGILFTTTVPGPNITKASADKAQAATLAVIEQLGYVGVLCIEFFVLTDGSLV 240 Query: 281 VNEMAPRPHNSGHYTIDACVTSQFEQQARAMARLPLGDTRQHSPSVMLNILGDVWYEGDT 340 VNEMAPRPHNSGHYTIDAC+TSQF QQARAMARLPLGD RQHSP+ MLNILGD+W+EGD+ Sbjct: 241 VNEMAPRPHNSGHYTIDACITSQFAQQARAMARLPLGDVRQHSPAAMLNILGDIWFEGDS 300 Query: 341 DAQREPAWDQVLALPGAHLHLYGKAEARRGRKMGHVTFTGATLADAQRQLATACAILGI 399 D REPAWD+VLALPGA+LHLYGK ARR RKMGH+TF ATL +AQ L AC ILGI Sbjct: 301 DEAREPAWDKVLALPGANLHLYGKDNARRARKMGHITFVAATLDEAQANLRKACDILGI 359