BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2456.p         (165 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774101.1| phosphoribosylaminoimidazole carboxylase cat...   243   8e-63
ref|YP_004754431.1| phosphoribosylaminoimidazole carboxylase cat...   211   4e-53
ref|YP_003753403.1| N5-carboxyaminoimidazole ribonucleotide muta...   205   2e-51
ref|NP_518696.1| phosphoribosylaminoimidazole carboxylase cataly...   204   3e-51
emb|CCA88961.1| N5-carboxyaminoimidazole ribonucleotide mutase [...   204   4e-51

>ref|YP_003774101.1| phosphoribosylaminoimidazole carboxylase catalytic subunit
           [Herbaspirillum seropedicae SmR1]
 gb|ADJ62193.1| phosphoribosylaminoimidazole carboxylase catalytic subunit protein
           [Herbaspirillum seropedicae SmR1]
          Length = 165

 Score =  243 bits (619), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 159/165 (96%), Positives = 163/165 (98%)

Query: 1   MNDTVKPLIGVVMGSSSDWEVMQNAVAILKDFGVPFEAQVISAHRMPDQMFAYAESARTR 60
           M+DTVKPL+GVVMGSSSDWEVMQNAVAILKDFGVPFEAQVISAHRMPDQMFAYA+ AR R
Sbjct: 1   MSDTVKPLVGVVMGSSSDWEVMQNAVAILKDFGVPFEAQVISAHRMPDQMFAYADRARAR 60

Query: 61  GLRAIIAGAGGAAHLPGMIAAKTIVPVLGVPVPSKYLRGEDSLLSIVQMPKGIPVATYAI 120
           GLRAIIAGAGGAAHLPGMIAAKTIVPVLGVPVPSKYLRGEDSLLSIVQMPKGIPVATYAI
Sbjct: 61  GLRAIIAGAGGAAHLPGMIAAKTIVPVLGVPVPSKYLRGEDSLLSIVQMPKGIPVATYAI 120

Query: 121 GEAGAANAALSAIAMLATTDAALAEKLEAFRKTQTQVALDMKLPV 165
           GEAGAANAALSAIAMLATTDAALA+KLEAFRKTQTQVALDMKLPV
Sbjct: 121 GEAGAANAALSAIAMLATTDAALADKLEAFRKTQTQVALDMKLPV 165


>ref|YP_004754431.1| phosphoribosylaminoimidazole carboxylase catalytic subunit
           [Collimonas fungivorans Ter331]
 gb|AEK63608.1| Phosphoribosylaminoimidazole carboxylase catalytic subunit
           [Collimonas fungivorans Ter331]
          Length = 172

 Score =  211 bits (536), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 144/159 (90%), Positives = 149/159 (93%)

Query: 6   KPLIGVVMGSSSDWEVMQNAVAILKDFGVPFEAQVISAHRMPDQMFAYAESARTRGLRAI 65
           KP+IG+VMGSSSDWEVMQ+AVAIL +FGV  EAQVISAHRMPDQMFAYAESAR RGL AI
Sbjct: 12  KPIIGIVMGSSSDWEVMQHAVAILTEFGVAHEAQVISAHRMPDQMFAYAESARERGLCAI 71

Query: 66  IAGAGGAAHLPGMIAAKTIVPVLGVPVPSKYLRGEDSLLSIVQMPKGIPVATYAIGEAGA 125
           IAGAGGAAHLPGMIAAKTIVPVLGVPVPSKYLRGEDSLLSIVQMPKGIPVATYAIGEAGA
Sbjct: 72  IAGAGGAAHLPGMIAAKTIVPVLGVPVPSKYLRGEDSLLSIVQMPKGIPVATYAIGEAGA 131

Query: 126 ANAALSAIAMLATTDAALAEKLEAFRKTQTQVALDMKLP 164
           ANAALSAIAMLATTD ALA KL AFR  QTQ+ALDMKLP
Sbjct: 132 ANAALSAIAMLATTDNALAAKLLAFRAKQTQIALDMKLP 170


>ref|YP_003753403.1| N5-carboxyaminoimidazole ribonucleotide mutase [Ralstonia
           solanacearum PSI07]
 emb|CBJ52143.1| N5-carboxyaminoimidazole ribonucleotide mutase [Ralstonia
           solanacearum PSI07]
 emb|CCA80098.1| N5-carboxyaminoimidazole ribonucleotide mutase [blood disease
           bacterium R229]
          Length = 169

 Score =  205 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 136/159 (85%), Positives = 146/159 (91%)

Query: 7   PLIGVVMGSSSDWEVMQNAVAILKDFGVPFEAQVISAHRMPDQMFAYAESARTRGLRAII 66
           PL+GVVMGSSSDW+VMQ+AV +LK+FG+P EAQV+SAHRMPD MF YAE+AR RGLRAII
Sbjct: 8   PLVGVVMGSSSDWDVMQHAVVLLKEFGIPHEAQVVSAHRMPDDMFRYAEAARGRGLRAII 67

Query: 67  AGAGGAAHLPGMIAAKTIVPVLGVPVPSKYLRGEDSLLSIVQMPKGIPVATYAIGEAGAA 126
           AGAGGAAHLPGMIAAKTIVPV GVPVPSKYLRGEDSLLSIVQMPKGIPVAT+AIGEAGAA
Sbjct: 68  AGAGGAAHLPGMIAAKTIVPVFGVPVPSKYLRGEDSLLSIVQMPKGIPVATFAIGEAGAA 127

Query: 127 NAALSAIAMLATTDAALAEKLEAFRKTQTQVALDMKLPV 165
           NAALSAIAMLATTD ALA KLEAFR  QT+VA  M LPV
Sbjct: 128 NAALSAIAMLATTDDALAGKLEAFRARQTEVARGMTLPV 166


>ref|NP_518696.1| phosphoribosylaminoimidazole carboxylase catalytic subunit protein
           [Ralstonia solanacearum GMI1000]
 emb|CAD14105.1| probable phosphoribosylaminoimidazole carboxylase catalytic subunit
           protein [Ralstonia solanacearum GMI1000]
 emb|CBJ39072.1| N5-carboxyaminoimidazole ribonucleotide mutase [Ralstonia
           solanacearum CMR15]
          Length = 169

 Score =  204 bits (519), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 136/159 (85%), Positives = 146/159 (91%)

Query: 7   PLIGVVMGSSSDWEVMQNAVAILKDFGVPFEAQVISAHRMPDQMFAYAESARTRGLRAII 66
           PL+GVVMGSSSDW+VMQ+AV +LK+F +PFEAQV+SAHRMPD MF YAE+AR RGLRAII
Sbjct: 8   PLVGVVMGSSSDWDVMQHAVVLLKEFDIPFEAQVVSAHRMPDDMFRYAEAARGRGLRAII 67

Query: 67  AGAGGAAHLPGMIAAKTIVPVLGVPVPSKYLRGEDSLLSIVQMPKGIPVATYAIGEAGAA 126
           AGAGGAAHLPGMIAAKTIVPV GVPVPSKYLRGEDSLLSIVQMPKGIPVAT+AIGEAGAA
Sbjct: 68  AGAGGAAHLPGMIAAKTIVPVFGVPVPSKYLRGEDSLLSIVQMPKGIPVATFAIGEAGAA 127

Query: 127 NAALSAIAMLATTDAALAEKLEAFRKTQTQVALDMKLPV 165
           NAALSAIAMLATTD ALA KLEAFR  QT+VA  M LPV
Sbjct: 128 NAALSAIAMLATTDDALAAKLEAFRARQTEVARGMTLPV 166


>emb|CCA88961.1| N5-carboxyaminoimidazole ribonucleotide mutase [Ralstonia syzygii
           R24]
          Length = 169

 Score =  204 bits (518), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 136/159 (85%), Positives = 146/159 (91%)

Query: 7   PLIGVVMGSSSDWEVMQNAVAILKDFGVPFEAQVISAHRMPDQMFAYAESARTRGLRAII 66
           PL+GVVMGSSSDW+VMQ+AV +LK+FG+P EAQV+SAHRMPD MF YAE+AR RGLRAII
Sbjct: 8   PLVGVVMGSSSDWDVMQHAVVLLKEFGIPHEAQVVSAHRMPDDMFRYAEAARGRGLRAII 67

Query: 67  AGAGGAAHLPGMIAAKTIVPVLGVPVPSKYLRGEDSLLSIVQMPKGIPVATYAIGEAGAA 126
           AGAGGAAHLPGMIAAKTIVPV GVPVPSKYLRGEDSLLSIVQMPKGIPVAT+AIGEAGAA
Sbjct: 68  AGAGGAAHLPGMIAAKTIVPVFGVPVPSKYLRGEDSLLSIVQMPKGIPVATFAIGEAGAA 127

Query: 127 NAALSAIAMLATTDAALAEKLEAFRKTQTQVALDMKLPV 165
           NAALSAIAMLATTD ALA KLEAFR  QT+VA  M LPV
Sbjct: 128 NAALSAIAMLATTDDALAGKLEAFRARQTEVARGMTLPV 166